Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049480_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:4:31734826:31741600:-1 gene:Zm00001d049480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Somatic embryogenesis receptor kinase 2
Sequence

ATGGCGGAGGCAGAGCCGCGGCGCCGGTGGGCGGTGTGGGCGCTACTGCTGCTGCTCCAC
CCCGCCGCGCTCGTGCTCGCCAACACCGAAGGTGATGCCTTGCATAGCTTACGTACCAAC
TTAAATGATCCTAATAATGTTCTACAAAGTTGGGATCCCACTCTGGTCAACCCCTGCACT
TGGTTTCATGTTACCTGCAATAATGACAACAGTGTCATCAGAGTTGAAAGTTTTACTTTA
TTCACAGTGATCTTGGAAATGCTGCACTATCAGGAACTTTGGTTCCGCAACTTGGACAGC
TCTAAAACTTGCAGTACCTGTGAAAACATTTCAGGCATGACTGCTCATATAAGAAATATC
CTGTTCATAATACTTATCACATATATGAAAATAAGGGAGCTCTACAGTAATAATATCAGC
GGAATTATACCTAGTGGATTTGGAAACCTTACAAACTTGGTCAGTTTGGATTTGTACCTG
AACAACTTCACTGGTCCAATACCAGATTCATTGGGGAAGCTATTGAAGCTGCGGTTCTTG
CGTCTTAACAACAACAGCCTTTCTGGTTCAATTCCAAAATCATTAACTGCTATCACTGCA
CTCCAAGTTCTGGATCTGTCAAATAACAATTTGTCTGGAGAAGTTCCATCAACTGGTTCC
TTTTCTTTATTCACCCCTATCAGTTTTGCGAACAACCCTAACTTATGTGGTCCTGGCACC
ACAAAACCTTGTCCTGGTGCTCCTCCCTTTTCTCCACCTCCATACAACCCTACACCCCCT
GTGCAATCACCAGGAAGTAGCTCTTCTAGTACTGGAGCAATTGCTGGTGGAGTGGCTGCT
GGCACAGCCTTGCTATTTGCTGTTCCTGCAATTAGTTTTGCCTATTGGCAGCGCAGGAAA
CCACAAGAACATTTCTTTGAAGTACCTGCCGAGGAAGATCCAGAGGTGCATCTTGGCCAG
CTTAAAAGATTTTCACTACGAGAATTACAAGTTGCAACAGATGGCTTCTGCAATAAGAAC
ATTCTTGGAAGAGGTGGATTTGGCAAAGTCTACAAAGGACGGCTGGCAGATGGATCTTTG
GTTGCTGTTAAGAGACTAAAGGAGGAGCGCACGCCTGGTGGGGAATTACAGTTTCAAACA
GAAGTTGAGATGATTAGTATGGCTGTACACAGAAATCTATTGCGTCTTCGTGGATTCTGT
ATGACACCAACAGAAAGGTTGCTTGTGTATCCATACATGGCTAATGGAAGTGTTGCATCA
CGTTTAAGAGACCGGGCACCAGCTGAACCTCCGCTAGATTGGCAAACAAGGAGAAGGATT
GCTTTGGGTTCTGCTAGGGGCCTGTCTTATTTACATGACCATTGTGACCCAAAGATTATT
CATCGTGATGTCAAAGCTGCAAATATTTTGTTAGATGAAGACTTCGAGGCTGTGGTGGGG
GATTTTGGTTTGGCCAAACTAATGGATTACAAGGATACCCATGTAACTACTGCTGTTCGT
GGAACAATTGGGCACATTGCACCTGAATACCTTTCAACAGGAAAATCCTCTGAGAAAACT
GATGTATTTGGCTATGGAATTACACTTTTAGAGCTTATTACAGGACAGCGGGCCTTCGAT
CTAGCTTGCCTTGCTAATGATGATGATGTCATGCTTCTTGATTGGGTCAAGGGATTGCTC
AAGGAGAAGAAACTGGAGAGTCTGGTCGACCAAGATCTAGAACACAACTACGTCGACGTT
GAGGTGGAATCTCTGGTACAGGTCGCACTCCTCTGCACTCAGAGCAACCCCATGGAACGC
CCTAAGATGTCAGAGGTTGTGAGGATGCTCGAAGGCGATGGTCTCGCCGAGAGATGGGAG
GAGTGGCAGAAAGCGGAAGTAGTACGGCAAGAGGTCGAGCTAGGCCCTCATCGAACTTCG
GAATGGATCCTCGACTTGACCGACAACCTCCACGCTGAACAGCTGTCAGGGCCGAGGTGA

Peptide Sequence

PEP ID

Zm00001d049480_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:4:31734826:31741600:-1 gene:Zm00001d049480 transcript:Zm00001d049480_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Somatic embryogenesis receptor kinase 2
Sequence

MAEAEPRRRWAVWALLLLLHPAALVLANTEGDALHSLRTNLNDPNNVLQSWDPTLVNPCT
WFHVTCNNDNSVIRVESFTLFTVILEMLHYQELWFRNLDSSKTCSTCENISGMTAHIRNI
LFIILITYMKIRELYSNNISGIIPSGFGNLTNLVSLDLYLNNFTGPIPDSLGKLLKLRFL
RLNNNSLSGSIPKSLTAITALQVLDLSNNNLSGEVPSTGSFSLFTPISFANNPNLCGPGT
TKPCPGAPPFSPPPYNPTPPVQSPGSSSSSTGAIAGGVAAGTALLFAVPAISFAYWQRRK
PQEHFFEVPAEEDPEVHLGQLKRFSLRELQVATDGFCNKNILGRGGFGKVYKGRLADGSL
VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS
RLRDRAPAEPPLDWQTRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVG
DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGITLLELITGQRAFD
LACLANDDDVMLLDWVKGLLKEKKLESLVDQDLEHNYVDVEVESLVQVALLCTQSNPMER
PKMSEVVRMLEGDGLAERWEEWQKAEVVRQEVELGPHRTSEWILDLTDNLHAEQLSGPR

Transcript Sequence

Transcript ID

Zm00001d049480_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:31734826:31741600:-1 gene:Zm00001d049480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Somatic embryogenesis receptor kinase 2
Sequence

CCACCCCACCACCCGTGTCTCGTATCGCCATTCTACCCAACCGCAACGAAAATGAGCCCA
GGCGATAAAGGCTGAGTCCGTCCGTCGAAAAGCGAGCGCAGAGTGGGAGAGAGAAGGGGG
TCGATTCGGAGAGATCGAGAAAGAGGAGGGAGGCGGAGGGCGACGTGGCGGTGGGTGCTG
AAGCGGAGCCTGCAGCGCCCGCTCGAGTACTCGCCGGATCGCCCGACCTGCCGGTACAGC
GCTGCAGACAGCCTGATCCGGCCGATCCGGCGGGAATGGCGGCGCGAGGAGGGATCTAGC
GGAGGTGGTGGGGTCGCGCGGCAATGGCGGAGGCAGAGCCGCGGCGCCGGTGGGCGGTGT
GGGCGCTACTGCTGCTGCTCCACCCCGCCGCGCTCGTGCTCGCCAACACCGAAGGTGATG
CCTTGCATAGCTTACGTACCAACTTAAATGATCCTAATAATGTTCTACAAAGTTGGGATC
CCACTCTGGTCAACCCCTGCACTTGGTTTCATGTTACCTGCAATAATGACAACAGTGTCA
TCAGAGTTGAAAGTTTTACTTTATTCACAGTGATCTTGGAAATGCTGCACTATCAGGAAC
TTTGGTTCCGCAACTTGGACAGCTCTAAAACTTGCAGTACCTGTGAAAACATTTCAGGCA
TGACTGCTCATATAAGAAATATCCTGTTCATAATACTTATCACATATATGAAAATAAGGG
AGCTCTACAGTAATAATATCAGCGGAATTATACCTAGTGGATTTGGAAACCTTACAAACT
TGGTCAGTTTGGATTTGTACCTGAACAACTTCACTGGTCCAATACCAGATTCATTGGGGA
AGCTATTGAAGCTGCGGTTCTTGCGTCTTAACAACAACAGCCTTTCTGGTTCAATTCCAA
AATCATTAACTGCTATCACTGCACTCCAAGTTCTGGATCTGTCAAATAACAATTTGTCTG
GAGAAGTTCCATCAACTGGTTCCTTTTCTTTATTCACCCCTATCAGTTTTGCGAACAACC
CTAACTTATGTGGTCCTGGCACCACAAAACCTTGTCCTGGTGCTCCTCCCTTTTCTCCAC
CTCCATACAACCCTACACCCCCTGTGCAATCACCAGGAAGTAGCTCTTCTAGTACTGGAG
CAATTGCTGGTGGAGTGGCTGCTGGCACAGCCTTGCTATTTGCTGTTCCTGCAATTAGTT
TTGCCTATTGGCAGCGCAGGAAACCACAAGAACATTTCTTTGAAGTACCTGCCGAGGAAG
ATCCAGAGGTGCATCTTGGCCAGCTTAAAAGATTTTCACTACGAGAATTACAAGTTGCAA
CAGATGGCTTCTGCAATAAGAACATTCTTGGAAGAGGTGGATTTGGCAAAGTCTACAAAG
GACGGCTGGCAGATGGATCTTTGGTTGCTGTTAAGAGACTAAAGGAGGAGCGCACGCCTG
GTGGGGAATTACAGTTTCAAACAGAAGTTGAGATGATTAGTATGGCTGTACACAGAAATC
TATTGCGTCTTCGTGGATTCTGTATGACACCAACAGAAAGGTTGCTTGTGTATCCATACA
TGGCTAATGGAAGTGTTGCATCACGTTTAAGAGACCGGGCACCAGCTGAACCTCCGCTAG
ATTGGCAAACAAGGAGAAGGATTGCTTTGGGTTCTGCTAGGGGCCTGTCTTATTTACATG
ACCATTGTGACCCAAAGATTATTCATCGTGATGTCAAAGCTGCAAATATTTTGTTAGATG
AAGACTTCGAGGCTGTGGTGGGGGATTTTGGTTTGGCCAAACTAATGGATTACAAGGATA
CCCATGTAACTACTGCTGTTCGTGGAACAATTGGGCACATTGCACCTGAATACCTTTCAA
CAGGAAAATCCTCTGAGAAAACTGATGTATTTGGCTATGGAATTACACTTTTAGAGCTTA
TTACAGGACAGCGGGCCTTCGATCTAGCTTGCCTTGCTAATGATGATGATGTCATGCTTC
TTGATTGGGTCAAGGGATTGCTCAAGGAGAAGAAACTGGAGAGTCTGGTCGACCAAGATC
TAGAACACAACTACGTCGACGTTGAGGTGGAATCTCTGGTACAGGTCGCACTCCTCTGCA
CTCAGAGCAACCCCATGGAACGCCCTAAGATGTCAGAGGTTGTGAGGATGCTCGAAGGCG
ATGGTCTCGCCGAGAGATGGGAGGAGTGGCAGAAAGCGGAAGTAGTACGGCAAGAGGTCG
AGCTAGGCCCTCATCGAACTTCGGAATGGATCCTCGACTTGACCGACAACCTCCACGCTG
AACAGCTGTCAGGGCCGAGGTGAAGGCAGCTTTGGACTCACTGATTCTTGTATCTTGCAA
GGGCAATAGCGATGTGTATCAATCATCCTAGTCAAGAATCCCCCATTTGTTCATACCAAT
CGTTGGGTGAAGCGAGGAGATGTGGTCAGCCATGATGTGCATTGGATGTATGTTGCTGAG
GTGACATGGCTGAGTTCATATATGCGAGGGCAGCAGAGCTCGACAAGCTAGTGTCGTGCG
CTGTCGGTGCATGCACTAGTGGTCCTGGATTTGCGAAGGTTGGAAGGAACTGACGCGAAC
CGTTCTGACTCCCCTCCTACAAAAGGATCGGATGATATAGGTGTGCCTATGGACCTGTTC
TGGGTGGCAAGGTTAATCAGAAGTTTCCGTGCTGAGTGTTGTAATTATGTCTCTAGACTG
TACTCTGTAGTGGCGAACTTAAGAGTTAGTTTGATGGACAGGAAAATGAAGGGGATTCCT
CTCCTATGGATCTTCTCTATTTTTCTGTCCAAACTAAATCAGCCCTAATGAGGGTGGGAC
GTTAGGGTGGGGATGTATAGACGTCATGTAATGGAGGAGGTGCATATTTCTTAGGGTACA
TCTACACATCCTAAACTGAATATAGCTTCGCCCCCCTATTTATATCGATGATCTCAATTT
TCGTG