Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049479_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:4:31729543:31732526:1 gene:Zm00001d049479 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of Vps4 activity in the MVB pathway protein
Sequence	ATGCGCCGGGACATCGCCAAGCTTCTCGAGGCCGGCCAGGAGGCCACCGCGCGGATCAGG GTGGAGCACATCATCCGGGAGGAGAACATGATGGCCGCGCAGGAGATCCTCGAGCTCTTC TGCGAGCTCATCGCTGTGCGCCTGCCCATCATCGAGACCCAAAGGGAGTGTCCTATTGAT CTCAAAGAAGCAATATCAAGTATCTGTTTCGCTGCTCCAAGATGTGCAGATCTACCTGAA CTGATACAAGTTCAAATGATGTTTGCAACTAAATATGGGAAGGAATTTGTCGCTGCAGCT TCAGAGTTGATGCCTGATTGCGGGGTCAATCGTCAGATAATTGAACTACTTTCTATTCGT CCTCCTCCTGTCCATGCAAAGTTGAAACTGCTGAAGGAGATAGCTGAGGAACATGAAGTT GACTGGGATCCATCAGAGACAGAGATAGAATTTCTCAAACCTCATGAAGATCTATTGAAT GGCCCGACCTACTTCAACGGCTCCACACTACCTCTTCCCAAGGAGAAACACGAGGAAACA GTAGCGGCAAGTGCTGCCGAGCGGCCTGACAAAGACTGCGAGTCAGATACCGGTCTTGAC TCACTGGATTTTCCTGAAGTCCCAAAAGCAGCAATACGTCCACCTTCTAACACACCATTG ACCCCAGATATTGGTCCCCATGCTCCGGGCTCTCAGCCGCTTCCTCGTGAGTTCTCAGAC CGTACTAACTTGGAGGAGAATCCAACAGCTGGCGGCGCTTTTAATGTTATTCAGATGAAA AGCCTGGAACATCTTATCTCTGCACCATCTGCTCAGCCAAACACACCAGATTTGCCAGAT GAAAAGAAGCAATTTATTCCTTTTGCATCTCCACCGCCAGTTGTTGCTACTCCATTGGAA AAAACTGAGACAGTTCCCTCACCTTCAATGTCTCCTCCAGTGAAGCCAACAGAGCCAAAA ATCTCCACAAAGCGGGTTGATGAATTGGCCACACCTCCAGTACCTCCCACTGATTATACG TTCACAAAACAACCAGAACAAGTACGGCCAATCTCTTCCGAGAGTGAGGCAAGTATCGAC TTGGACGATGTACTATCTGCTGCTCAGACAGCTGCTGAATCAGCGGAGCGAGCTGCGTCC GCAGCCCGCGCCGCTGCGAACCTTGTGCAGCTACGCATTGCAGACCTAAAGAAGAATTCA AGGGTCTATAACAAGTACACCGACAGTGCTCAAAAGGAAAGCCCTCATCAGGCCGAGGGT ACACAGAAACCAGTATTTGATCACCAGGACTCCTTCACCAACGAGACACAGGACTATGTG CCGTCTCATGTGCCGCAGAGGTCGCCGTCTCTGGAGGACGATCCGTATTTCTCCTACCCC AACTTGTTCTCGGCGCCAAAACCTTGA

Peptide Sequence

PEP ID	Zm00001d049479_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:4:31729543:31732526:1 gene:Zm00001d049479 transcript:Zm00001d049479_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of Vps4 activity in the MVB pathway protein
Sequence	MRRDIAKLLEAGQEATARIRVEHIIREENMMAAQEILELFCELIAVRLPIIETQRECPID LKEAISSICFAAPRCADLPELIQVQMMFATKYGKEFVAAASELMPDCGVNRQIIELLSIR PPPVHAKLKLLKEIAEEHEVDWDPSETEIEFLKPHEDLLNGPTYFNGSTLPLPKEKHEET VAASAAERPDKDCESDTGLDSLDFPEVPKAAIRPPSNTPLTPDIGPHAPGSQPLPREFSD RTNLEENPTAGGAFNVIQMKSLEHLISAPSAQPNTPDLPDEKKQFIPFASPPPVVATPLE KTETVPSPSMSPPVKPTEPKISTKRVDELATPPVPPTDYTFTKQPEQVRPISSESEASID LDDVLSAAQTAAESAERAASAARAAANLVQLRIADLKKNSRVYNKYTDSAQKESPHQAEG TQKPVFDHQDSFTNETQDYVPSHVPQRSPSLEDDPYFSYPNLFSAPKP

Transcript Sequence

Transcript ID	Zm00001d049479_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:31729543:31732526:1 gene:Zm00001d049479 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of Vps4 activity in the MVB pathway protein
Sequence	CGGGAAGCTTTGGTCCGCGTTGGTTAGTTCTGGTTTCTGATGTCGTGTGTCGGTGTGTGC GTGCGTGCGCAGCAAGACGCTGCTGAAGCTGTCGATCCCGCGGATAAAGCTGCTGCGGAA CCGGCGGGAGCTGCAGCTGCGCCAGATGCGCCGGGACATCGCCAAGCTTCTCGAGGCCGG CCAGGAGGCCACCGCGCGGATCAGGGTGGAGCACATCATCCGGGAGGAGAACATGATGGC CGCGCAGGAGATCCTCGAGCTCTTCTGCGAGCTCATCGCTGTGCGCCTGCCCATCATCGA GACCCAAAGGGAGTGTCCTATTGATCTCAAAGAAGCAATATCAAGTATCTGTTTCGCTGC TCCAAGATGTGCAGATCTACCTGAACTGATACAAGTTCAAATGATGTTTGCAACTAAATA TGGGAAGGAATTTGTCGCTGCAGCTTCAGAGTTGATGCCTGATTGCGGGGTCAATCGTCA GATAATTGAACTACTTTCTATTCGTCCTCCTCCTGTCCATGCAAAGTTGAAACTGCTGAA GGAGATAGCTGAGGAACATGAAGTTGACTGGGATCCATCAGAGACAGAGATAGAATTTCT CAAACCTCATGAAGATCTATTGAATGGCCCGACCTACTTCAACGGCTCCACACTACCTCT TCCCAAGGAGAAACACGAGGAAACAGTAGCGGCAAGTGCTGCCGAGCGGCCTGACAAAGA CTGCGAGTCAGATACCGGTCTTGACTCACTGGATTTTCCTGAAGTCCCAAAAGCAGCAAT ACGTCCACCTTCTAACACACCATTGACCCCAGATATTGGTCCCCATGCTCCGGGCTCTCA GCCGCTTCCTCGTGAGTTCTCAGACCGTACTAACTTGGAGGAGAATCCAACAGCTGGCGG CGCTTTTAATGTTATTCAGATGAAAAGCCTGGAACATCTTATCTCTGCACCATCTGCTCA GCCAAACACACCAGATTTGCCAGATGAAAAGAAGCAATTTATTCCTTTTGCATCTCCACC GCCAGTTGTTGCTACTCCATTGGAAAAAACTGAGACAGTTCCCTCACCTTCAATGTCTCC TCCAGTGAAGCCAACAGAGCCAAAAATCTCCACAAAGCGGGTTGATGAATTGGCCACACC TCCAGTACCTCCCACTGATTATACGTTCACAAAACAACCAGAACAAGTACGGCCAATCTC TTCCGAGAGTGAGGCAAGTATCGACTTGGACGATGTACTATCTGCTGCTCAGACAGCTGC TGAATCAGCGGAGCGAGCTGCGTCCGCAGCCCGCGCCGCTGCGAACCTTGTGCAGCTACG CATTGCAGACCTAAAGAAGAATTCAAGGGTCTATAACAAGTACACCGACAGTGCTCAAAA GGAAAGCCCTCATCAGGCCGAGGGTACACAGAAACCAGTATTTGATCACCAGGACTCCTT CACCAACGAGACACAGGACTATGTGCCGTCTCATGTGCCGCAGAGGTCGCCGTCTCTGGA GGACGATCCGTATTTCTCCTACCCCAACTTGTTCTCGGCGCCAAAACCTTGAAGGCGGAA ACTAGTGGCCTGTAACTGCTAGTAGTAGTCCTATTATGTCTTGGTCTTCGCTGTTGCCTC GGAATTTCTGTGTGTTGCTGAGTTTGGTACATAACGGTACAAAAGGAGACTACTGGGTTA TTACTTGGCTACGAAACCTGTCTAGTTTGAGTCTCTGTAAACTGTACATGTACGGTGTCT GTA