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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049476_T103
CDS Infomation

cds chromosome:B73_RefGen_v4:4:31588164:31589007:1 gene:Zm00001d049476 gene_biotype:protein_coding transcript_biotype:protein_coding description:Z1A alpha zein protein

Sequence

ATGGCAACCAAAATATTTTGCTTCCTTATGCTCCTTGGTCTTTCTGCAAGTGCTGCTACC
GCGACCATTTTCCCGCAATGCTCACAAGCTCCTATAGCTTCCCTTCTTCCCCCATACCTC
TCACCAGCGGTGTCTTCAGTATGTGAAAACCCAATTCTTCAACCCTACAGGATCCAACAG
GCAATCGCAGCAGGCATCTTACCTTTATCACCCTTGTTCCTCCAACAACCGTCAGCCCTA
TTACAGCAGTTACCTTTGGTGCATTTGTTGGCACAAAACATCAGGGCACAACAACTACAA
CAACTTGTGCTAGCAAACCTTGCTGCCTACTCTCAGCAACAGCAGTTTCTTCCATTCAAC
CAACTGGCTGCATTGAACTCTGCTGCTTATTTGCAACAACAATTGTTGTCGTTCTACCTG
CACGCTGCGCCTAACGCTGGCACCCTCTTACAACTGCAACAATTGCTGCCATTCAACCAA
CTTGCTTTGACAAACCCAGCAGCGTTCTACCAACAACCCATCATTGGTGGTGCCCTCTTT
TAG

Peptide Sequence

PEP ID

Zm00001d049476_P103
PEP Infomation

pep chromosome:B73_RefGen_v4:4:31588164:31589007:1 gene:Zm00001d049476 transcript:Zm00001d049476_T103 gene_biotype:protein_coding transcript_biotype:protein_coding description:Z1A alpha zein protein

Sequence

MATKIFCFLMLLGLSASAATATIFPQCSQAPIASLLPPYLSPAVSSVCENPILQPYRIQQ
AIAAGILPLSPLFLQQPSALLQQLPLVHLLAQNIRAQQLQQLVLANLAAYSQQQQFLPFN
QLAALNSAAYLQQQLLSFYLHAAPNAGTLLQLQQLLPFNQLALTNPAAFYQQPIIGGALF

Transcript Sequence

Transcript ID

Zm00001d049476_T103
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:31588164:31589007:1 gene:Zm00001d049476 gene_biotype:protein_coding transcript_biotype:protein_coding description:Z1A alpha zein protein

Sequence

ATCACTCATATTATTAAGACCAACTAGCAACATAGAAAGCACAATAGTGTACCAACAATG
GCAACCAAAATATTTTGCTTCCTTATGCTCCTTGGTCTTTCTGCAAGTGCTGCTACCGCG
ACCATTTTCCCGCAATGCTCACAAGCTCCTATAGCTTCCCTTCTTCCCCCATACCTCTCA
CCAGCGGTGTCTTCAGTATGTGAAAACCCAATTCTTCAACCCTACAGGATCCAACAGGCA
ATCGCAGCAGGCATCTTACCTTTATCACCCTTGTTCCTCCAACAACCGTCAGCCCTATTA
CAGCAGTTACCTTTGGTGCATTTGTTGGCACAAAACATCAGGGCACAACAACTACAACAA
CTTGTGCTAGCAAACCTTGCTGCCTACTCTCAGCAACAGCAGTTTCTTCCATTCAACCAA
CTGGCTGCATTGAACTCTGCTGCTTATTTGCAACAACAATTGTTGTCGTTCTACCTGCAC
GCTGCGCCTAACGCTGGCACCCTCTTACAACTGCAACAATTGCTGCCATTCAACCAACTT
GCTTTGACAAACCCAGCAGCGTTCTACCAACAACCCATCATTGGTGGTGCCCTCTTTTAG
ATTGCTTATGAGTTATAGTTCAATAATGAAGTTTTTTGGATGATGTTTGTGGCTTCCCAG
AAATAAGAAAGTACATTTCTAGATT