Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049457_T061
CDS Infomation	cds chromosome:B73_RefGen_v4:4:30899308:30905599:-1 gene:Zm00001d049457 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene108 description:Histone-lysine N-methyltransferase ATXR3
Sequence	ATGCCACCTAAGAAGTGGAGGAAGGTGCTGGCAGCCTCCGCAGCTGCTGTGGAGGTGGAG CCTGGGGAGATTGTGAGTACGAAGCAAGCAGTGCCATTGAAGAAAGCAAGGAGAAATGGG GAGGTTGACAAGGTAGAGCTGCTGCCGGAGAGGCAGAGGAAGGTAAAATCTTCTGGGAAG AGCACCAGGAAGTCTATCAAGGATGACATGGAGCCAGGGGAGATTGCACCGCCAGAAAAA AGGCGAGATGCCAAGTCCCAACGGGCTGATGATAACAGCAGGAGGCCAAGTTCATCTGCC CAGAAAAGCTCCTTGCGGGATTCTGATGAAGAGCCTGGTGAAATTAAGCCAGAGAGCAGC ACCAGTGGCAGTCTAAGGAAGAACCAGCCAACAGAGCCCCACAGCATTAACCACAAGCAC CACACTGACACCTCTGACCAGTCAGGATCAAAAAGTCATAGGAAGGGTCCGAAGGGAGAA GGGAAGAGATCTGCTGCCAGGCATTTGTCTGGGAGAAACCGTGAGATATCATCACCAACA CGGGATCGGCGTGATCGGCACGAGAGGAGCCCAGGCATCTTGGGTCGTTTTCCTCATGAG CGCTCTCGTCATGACAGGTATGACAGGAGCCCGAGCCGCTTAGAGCGTTCCCCACATCGA GAGCGTGCTCGCCACTACGAAAGCAGAGACCACAGCCCATATGTTTCACCTCGACATAGA GCTCGTCAGCCCCATTTCAGGGATAACACGCCAAGTCGTGTTGATAATTTCCCTCGTGGG AGAGTCCAGCGTGAGGATGTCAGAGACCGTAGCCCATTTCTTCACGACAGATCGCCTTCT GAACGTTTTCGGCCTACTGATACTCATGAAGCAAGCAAGAAGAGCAGAAGTGGCAACAAC TCAGAAAAGTCACAGCACAAAAGCAAATCAGCGAAGCAATCTTCAAAGACCAAGAGTGGT AGCAATGAGAAGAATGAGAAAATCTCCAATGAAAAGCCCACTGAAAGCAGTAAGTACACT GAACTGCCACCGCCACCTCCACTACCGCTGCCACCACCGCCGCCTCCACCACCTCCACCT CCACCTCTGCCACCTGCTGTACCGCCTCCCCTGCCTCCACCACCAGAACCTGAGCCAACT GGAGTTCTAGCCGAAGATATGATAGAAGACATGGATATCTGTGACACCCCACCTCACACT AGTGCAGCACCTGAACCCACGGATCCAATTTATGATATAGGGAGGTGGTTTTACCTTGAT CACTTCGGTATCGAGCAAGGACCTTCCAAGCTTGCTGTATTGAAGAAGCTGGTGGAAGAT GGATATCTTCTTTCTGACCATTTGATAAAACATGCTGATAGCAACCGATGGGTGACTGTA GAGAATGCAGCTTCACCACTGGTGCCATCTGATTTCCCCTCTTTTTATTCGGACACTTCA ACACAGATGGTTAACCCACCAGAAGCACCAGGAAATTTGCTCGATGAAGCTCTAGAGGAG GCTTCTAACTTGGCATCAGGTTCTGAGGATAAACAAATGGTGGAAGCTTCTGCAGAAGAT AGTGAAGAATTCTATATTAATGATAGGGTTGAAGCACTGATGGATGGATCAATTTTGGTG CATGGCCAGGAGCTCGAGATCATTGGAGAGCTTTTAGGTGCAGATTTTCAGCCTGCTGAT TGGCAAAGATTGAGTCACCCTGAAGATTTTACTAGGTTCCATGTGCACATCGAAGGAGAC GATGAAATCATTGGAGGCACAGAATTCTTAGAAAATAGAACAACAGATGCTTATGGCCTT GTTTCTGTGGACAACTTCCATCATTATGTCGAGTCTAGCGAATGGTTTTCTGGGAGATGG TCTTGCAAAGGTGGTGACTGGAGGAGAAATGACGAATTGGGCCAAGATACTCCATTCAGG AAAAAACTTGTTCTCAATGAAGGGTATCCTCTATGTCAGATACCAAAAGGTAGCTATGAG GATCCACGCCGGCCCTGCAAGGATGAGTTGTACTACCCTGTACGTGGTAAAAAGCATGAC TTGCCATTGTGGGCATTCTCATCGACAGAAGAAGATATTGACGGTGTTAATGACACCACT AAAAACACTGTTGTGCCTGGGAGGCCAGGTCAGACCAGACAGCCTCCTAGCGAAGTGAAG GTGATGCTTCAAGTGGTTAGTATAAATTATCATGTTATTAAAGACCAATCATCTGTCGAA CCCCGTACAAAACCCAGAGGAACTGATCGACCACCGTCGAGATCTTCACGCTCCCATTCA ATTGGGGCTGAGAGAAGTTCTATCCATGATGGTTCGTCGCATTTCAGGAAGCACCATGAC CATGATTCACAAAGTTTTCACAAGTCCAAGTCTGTTCCAAACATTCCGAAGGACCATGTA TGCACTGTTGATGAGCTGTCAGTTAATCGGGGTGACTGGTACTACCTTGATGGCACTGGG CATGATCAAGGCCCATTTTCTTATTCCGAATTGCAAGAATTAGTTAAAAAGGACACTATC ATTGAACAAAGTAGCGTGTTCCGTAAGATCGATAACACATGGTTTCCAGTTCTTAAGGAT TTAAAACCTGGAAGCTCTGTTCCCAGTGCAGCACCAAGCTCAAACTTAATTGCTGCTTTT ACGCACCCAGACCAATATAATTTTGGTGTGAACCAAGGATCAAGTAGCTTCCATGAGTTA CACCCCCAGTTCGCGGGTTATACACGTGGCAAATTACATGAACTAGTCATGAAATATTTC AAGAGCAGGGAACTTACTTTAGCTATAAATGAGGTCTTGGATCCATGGATTTCAGCAAAG CAACCAAAAAAAGAGTTTGAAGCATACTTTTCTCACAATTCAGCATCTAGGAATTTCCTG CCAGAAGATGGTGGGTCTGCAAAAAGGGCAAGATTGCTACCTGACCAGAGTGACGAAAAT ATTCATTTGTCAGAAGACATTATTGCTAGTCGGAAGGAGGACATCTGTTTTGAAGAGTTA TGTGATGGAGCATCGTCTGTTGATAATGATTCTGTGAATCCCAGAGCAGGAAATGCAAGC TGGGGTCTACTAAATGACCATCTGTTAGCAAGAATCTTTCATTTTATGAGGGCAGATTTG AAATCACTTATTTCTTCTGCAGCTACCTGTAAGAGCTGGAATGCTGCTGCGAAGTATTAC AGAAACATGTGTAGATTCATTGATCTGTCTTCTGTTGGTCCTCTTTGCACTGATTCAGTG TTTTGTGATATTATGGCTGGCTTTGAGAAGCAAAATATTAGGACTCTTATTTTAGCTGGT TGTTCGAACCTTAGTTCACATGCCCTTGGCAGAGTACTTGAACACCTTCCACAAATATCT TATGTTCATATTCAAGGTTGCAGTCATCTAGGGGATCTGAAAAATAAATTTCAGCATGTA AAATGGATCAGGAGCTCATTGAATCCAGAGGGGTCATATCGGAAAATGAAAACCTTGAAG CAGATAGGTGATGGGAACAACTATGCATCCAAAGTTGCAAGGAACTTCGACCAGCTAGAT GATTCTGATGAGCTTGATGGTTATTTTGCTGATATTTCAAAAATCGAGGGTGCTAGCCTT TTTTCATTTGGACAAGGTTTCTATAAACGATCGAAATTGCTTGATGCTAGAAAGTCCTCC GCGGTTTTGTCGAGGGATGCAGAAATGAGGCGTTTGATGCAGAGACAGGCAGAGAACAGT TACAGGAAGATGGAAGAGTTTGTCATAAACAGGCTGAGAGAAATTATGAGGTGTAACAGA TTTGATTTTTTCATTCCAAAGGTTTCCAAGATCGAAGGTAGGTTGAAAAATGGGTATTAT GCTCGCCATGGTTTTCGTACCATCAAGCATGACATCCGTACCATGTGCCAAGATGCATTG AGATATAAAGATGGCAATGATTTGGATGATGTAAAGCAAATTGTTGTCTCCTTCATACAA CTAGCAAAGAGACTAGGGAACCCAAGGTACATTTCTGAGAGAAACGGAGCAGCAGCCCAG GACAGCCTGGACATTAGTCAATATTCATTCGATACTAAA

Peptide Sequence

PEP ID	Zm00001d049457_P061
PEP Infomation	pep chromosome:B73_RefGen_v4:4:30899308:30905599:-1 gene:Zm00001d049457 transcript:Zm00001d049457_T061 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene108 description:Histone-lysine N-methyltransferase ATXR3
Sequence	MPPKKWRKVLAASAAAVEVEPGEIVSTKQAVPLKKARRNGEVDKVELLPERQRKVKSSGK STRKSIKDDMEPGEIAPPEKRRDAKSQRADDNSRRPSSSAQKSSLRDSDEEPGEIKPESS TSGSLRKNQPTEPHSINHKHHTDTSDQSGSKSHRKGPKGEGKRSAARHLSGRNREISSPT RDRRDRHERSPGILGRFPHERSRHDRYDRSPSRLERSPHRERARHYESRDHSPYVSPRHR ARQPHFRDNTPSRVDNFPRGRVQREDVRDRSPFLHDRSPSERFRPTDTHEASKKSRSGNN SEKSQHKSKSAKQSSKTKSGSNEKNEKISNEKPTESSKYTELPPPPPLPLPPPPPPPPPP PPLPPAVPPPLPPPPEPEPTGVLAEDMIEDMDICDTPPHTSAAPEPTDPIYDIGRWFYLD HFGIEQGPSKLAVLKKLVEDGYLLSDHLIKHADSNRWVTVENAASPLVPSDFPSFYSDTS TQMVNPPEAPGNLLDEALEEASNLASGSEDKQMVEASAEDSEEFYINDRVEALMDGSILV HGQELEIIGELLGADFQPADWQRLSHPEDFTRFHVHIEGDDEIIGGTEFLENRTTDAYGL VSVDNFHHYVESSEWFSGRWSCKGGDWRRNDELGQDTPFRKKLVLNEGYPLCQIPKGSYE DPRRPCKDELYYPVRGKKHDLPLWAFSSTEEDIDGVNDTTKNTVVPGRPGQTRQPPSEVK VMLQVVSINYHVIKDQSSVEPRTKPRGTDRPPSRSSRSHSIGAERSSIHDGSSHFRKHHD HDSQSFHKSKSVPNIPKDHVCTVDELSVNRGDWYYLDGTGHDQGPFSYSELQELVKKDTI IEQSSVFRKIDNTWFPVLKDLKPGSSVPSAAPSSNLIAAFTHPDQYNFGVNQGSSSFHEL HPQFAGYTRGKLHELVMKYFKSRELTLAINEVLDPWISAKQPKKEFEAYFSHNSASRNFL PEDGGSAKRARLLPDQSDENIHLSEDIIASRKEDICFEELCDGASSVDNDSVNPRAGNAS WGLLNDHLLARIFHFMRADLKSLISSAATCKSWNAAAKYYRNMCRFIDLSSVGPLCTDSV FCDIMAGFEKQNIRTLILAGCSNLSSHALGRVLEHLPQISYVHIQGCSHLGDLKNKFQHV KWIRSSLNPEGSYRKMKTLKQIGDGNNYASKVARNFDQLDDSDELDGYFADISKIEGASL FSFGQGFYKRSKLLDARKSSAVLSRDAEMRRLMQRQAENSYRKMEEFVINRLREIMRCNR FDFFIPKVSKIEGRLKNGYYARHGFRTIKHDIRTMCQDALRYKDGNDLDDVKQIVVSFIQ LAKRLGNPRYISERNGAAAQDSLDISQYSFDTK

Transcript Sequence

Transcript ID	Zm00001d049457_T061
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:30899308:30905599:-1 gene:Zm00001d049457 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene108 description:Histone-lysine N-methyltransferase ATXR3
Sequence	CCTGGAGGAGGGGGAGCTGCTCAGTGGGGAGGCGGAGACCAATGGGTTGCCTGAGAGGAG CATGCCACCTAAGAAGTGGAGGAAGGTGCTGGCAGCCTCCGCAGCTGCTGTGGAGGTGGA GCCTGGGGAGATTGTGAGTACGAAGCAAGCAGTGCCATTGAAGAAAGCAAGGAGAAATGG GGAGGTTGACAAGGTAGAGCTGCTGCCGGAGAGGCAGAGGAAGGTAAAATCTTCTGGGAA GAGCACCAGGAAGTCTATCAAGGATGACATGGAGCCAGGGGAGATTGCACCGCCAGAAAA AAGGCGAGATGCCAAGTCCCAACGGGCTGATGATAACAGCAGGAGGCCAAGTTCATCTGC CCAGAAAAGCTCCTTGCGGGATTCTGATGAAGAGCCTGGTGAAATTAAGCCAGAGAGCAG CACCAGTGGCAGTCTAAGGAAGAACCAGCCAACAGAGCCCCACAGCATTAACCACAAGCA CCACACTGACACCTCTGACCAGTCAGGATCAAAAAGTCATAGGAAGGGTCCGAAGGGAGA AGGGAAGAGATCTGCTGCCAGGCATTTGTCTGGGAGAAACCGTGAGATATCATCACCAAC ACGGGATCGGCGTGATCGGCACGAGAGGAGCCCAGGCATCTTGGGTCGTTTTCCTCATGA GCGCTCTCGTCATGACAGGTATGACAGGAGCCCGAGCCGCTTAGAGCGTTCCCCACATCG AGAGCGTGCTCGCCACTACGAAAGCAGAGACCACAGCCCATATGTTTCACCTCGACATAG AGCTCGTCAGCCCCATTTCAGGGATAACACGCCAAGTCGTGTTGATAATTTCCCTCGTGG GAGAGTCCAGCGTGAGGATGTCAGAGACCGTAGCCCATTTCTTCACGACAGATCGCCTTC TGAACGTTTTCGGCCTACTGATACTCATGAAGCAAGCAAGAAGAGCAGAAGTGGCAACAA CTCAGAAAAGTCACAGCACAAAAGCAAATCAGCGAAGCAATCTTCAAAGACCAAGAGTGG TAGCAATGAGAAGAATGAGAAAATCTCCAATGAAAAGCCCACTGAAAGCAGTAAGTACAC TGAACTGCCACCGCCACCTCCACTACCGCTGCCACCACCGCCGCCTCCACCACCTCCACC TCCACCTCTGCCACCTGCTGTACCGCCTCCCCTGCCTCCACCACCAGAACCTGAGCCAAC TGGAGTTCTAGCCGAAGATATGATAGAAGACATGGATATCTGTGACACCCCACCTCACAC TAGTGCAGCACCTGAACCCACGGATCCAATTTATGATATAGGGAGGTGGTTTTACCTTGA TCACTTCGGTATCGAGCAAGGACCTTCCAAGCTTGCTGTATTGAAGAAGCTGGTGGAAGA TGGATATCTTCTTTCTGACCATTTGATAAAACATGCTGATAGCAACCGATGGGTGACTGT AGAGAATGCAGCTTCACCACTGGTGCCATCTGATTTCCCCTCTTTTTATTCGGACACTTC AACACAGATGGTTAACCCACCAGAAGCACCAGGAAATTTGCTCGATGAAGCTCTAGAGGA GGCTTCTAACTTGGCATCAGGTTCTGAGGATAAACAAATGGTGGAAGCTTCTGCAGAAGA TAGTGAAGAATTCTATATTAATGATAGGGTTGAAGCACTGATGGATGGATCAATTTTGGT GCATGGCCAGGAGCTCGAGATCATTGGAGAGCTTTTAGGTGCAGATTTTCAGCCTGCTGA TTGGCAAAGATTGAGTCACCCTGAAGATTTTACTAGGTTCCATGTGCACATCGAAGGAGA CGATGAAATCATTGGAGGCACAGAATTCTTAGAAAATAGAACAACAGATGCTTATGGCCT TGTTTCTGTGGACAACTTCCATCATTATGTCGAGTCTAGCGAATGGTTTTCTGGGAGATG GTCTTGCAAAGGTGGTGACTGGAGGAGAAATGACGAATTGGGCCAAGATACTCCATTCAG GAAAAAACTTGTTCTCAATGAAGGGTATCCTCTATGTCAGATACCAAAAGGTAGCTATGA GGATCCACGCCGGCCCTGCAAGGATGAGTTGTACTACCCTGTACGTGGTAAAAAGCATGA CTTGCCATTGTGGGCATTCTCATCGACAGAAGAAGATATTGACGGTGTTAATGACACCAC TAAAAACACTGTTGTGCCTGGGAGGCCAGGTCAGACCAGACAGCCTCCTAGCGAAGTGAA GGTGATGCTTCAAGTGGTTAGTATAAATTATCATGTTATTAAAGACCAATCATCTGTCGA ACCCCGTACAAAACCCAGAGGAACTGATCGACCACCGTCGAGATCTTCACGCTCCCATTC AATTGGGGCTGAGAGAAGTTCTATCCATGATGGTTCGTCGCATTTCAGGAAGCACCATGA CCATGATTCACAAAGTTTTCACAAGTCCAAGTCTGTTCCAAACATTCCGAAGGACCATGT ATGCACTGTTGATGAGCTGTCAGTTAATCGGGGTGACTGGTACTACCTTGATGGCACTGG GCATGATCAAGGCCCATTTTCTTATTCCGAATTGCAAGAATTAGTTAAAAAGGACACTAT CATTGAACAAAGTAGCGTGTTCCGTAAGATCGATAACACATGGTTTCCAGTTCTTAAGGA TTTAAAACCTGGAAGCTCTGTTCCCAGTGCAGCACCAAGCTCAAACTTAATTGCTGCTTT TACGCACCCAGACCAATATAATTTTGGTGTGAACCAAGGATCAAGTAGCTTCCATGAGTT ACACCCCCAGTTCGCGGGTTATACACGTGGCAAATTACATGAACTAGTCATGAAATATTT CAAGAGCAGGGAACTTACTTTAGCTATAAATGAGGTCTTGGATCCATGGATTTCAGCAAA GCAACCAAAAAAAGAGTTTGAAGCATACTTTTCTCACAATTCAGCATCTAGGAATTTCCT GCCAGAAGATGGTGGGTCTGCAAAAAGGGCAAGATTGCTACCTGACCAGAGTGACGAAAA TATTCATTTGTCAGAAGACATTATTGCTAGTCGGAAGGAGGACATCTGTTTTGAAGAGTT ATGTGATGGAGCATCGTCTGTTGATAATGATTCTGTGAATCCCAGAGCAGGAAATGCAAG CTGGGGTCTACTAAATGACCATCTGTTAGCAAGAATCTTTCATTTTATGAGGGCAGATTT GAAATCACTTATTTCTTCTGCAGCTACCTGTAAGAGCTGGAATGCTGCTGCGAAGTATTA CAGAAACATGTGTAGATTCATTGATCTGTCTTCTGTTGGTCCTCTTTGCACTGATTCAGT GTTTTGTGATATTATGGCTGGCTTTGAGAAGCAAAATATTAGGACTCTTATTTTAGCTGG TTGTTCGAACCTTAGTTCACATGCCCTTGGCAGAGTACTTGAACACCTTCCACAAATATC TTATGTTCATATTCAAGGTTGCAGTCATCTAGGGGATCTGAAAAATAAATTTCAGCATGT AAAATGGATCAGGAGCTCATTGAATCCAGAGGGGTCATATCGGAAAATGAAAACCTTGAA GCAGATAGGTGATGGGAACAACTATGCATCCAAAGTTGCAAGGAACTTCGACCAGCTAGA TGATTCTGATGAGCTTGATGGTTATTTTGCTGATATTTCAAAAATCGAGGGTGCTAGCCT TTTTTCATTTGGACAAGGTTTCTATAAACGATCGAAATTGCTTGATGCTAGAAAGTCCTC CGCGGTTTTGTCGAGGGATGCAGAAATGAGGCGTTTGATGCAGAGACAGGCAGAGAACAG TTACAGGAAGATGGAAGAGTTTGTCATAAACAGGCTGAGAGAAATTATGAGGTGTAACAG ATTTGATTTTTTCATTCCAAAGGTTTCCAAGATCGAAGGTAGGTTGAAAAATGGGTATTA TGCTCGCCATGGTTTTCGTACCATCAAGCATGACATCCGTACCATGTGCCAAGATGCATT GAGATATAAAGATGGCAATGATTTGGATGATGTAAAGCAAATTGTTGTCTCCTTCATACA ACTAGCAAAGAGACTAGGGAACCCAAGGTACATTTCTGAGAGAAACGGAGCAGCAGCCCA GGACAGCCTGGACATTAGTCAATATTCATTCGATACTAAAC