Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049455_T014
CDS Infomation	cds chromosome:B73_RefGen_v4:4:30749749:30757086:-1 gene:Zm00001d049455 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative SNF2-domain/RING finger domain/helicase domain protein
Sequence	ATGAATGAAAACTCTGCCATTATTATTTCGGATAGTGATGATGACTCAATTGGCTCAATA TTCGATGATGACGACCAGCCAGCGTCTGCAATCGCAAGGCTTGATCAAAATGCTGAAGGA CGAATAATCAATTTTGAGGATGAAGATTGGCAAAGGAGCGCTCCTGCTCCACCATCGACT AAGCCTACTGAGAACAACAATGGTCAATACAGGATTCTTCCAGCATCCCTTACGAATGGT AGACATGCTGAGAGTAGTCGTTATACATTTGGTTCAGTGGACAGGATTCATCCCCATGCA AATCCTTATATGGCTATGCGACCGGGCCATTCTACTTCCAGTAGAATTGATAGCGTAGTG GAAAAGCACAACAGTTCTACAGCAGATGCAAATGACAATAACAAGAGGGTCCTTCCATCA TCCTTTTCAAATGGCAACACATCAAAATCTATGCATCCAATTGTTGCTAGCGAAACACGC AAGCTCCCACTGCCTTTATCCACCAAAAAGTCACCAAATATTGGTGAAAACAGAATGGGG ACAAATATTGCCAATGGAAATTTGCAGCCTTCATCTTCAATAATGGCAAGAGGAACTTCT AGTACACTTAATACCCATAAAGTGGATGATGATGATGATGTCATTGTATATGGAGGTTCT AGCTCACATAGGGTACTGCCTTCAACGTTTGAGGCAACCAATTCTAATAACAGTGAAGTT GCTAAGGGCTTTGAGACACACAGTCGCCTTAATCCTGAAAATAGGGTCTTAGATTACGCT GAGAGAGCAGTATATCAAGAAGCCCTGCAGAATATTAGTCGCGAAAAAAGTGAAGATGAT CTGCCTGAGGGTGTGCTAGCAGTACCTCTGCTTAGACATCAGAAAATGGCATTGGCTTGG ATGGTTTCAAAGGAGAATAGCTCACATTGTGCTGGTGGAATTCTTGCCGATGATCAGGGC CTTGGGAAGACAGTGTCTACTATTGCCCTTATACAAAAACAGAGGATGGAACAGTCGAAA TTTATGTTTGTTGATTCAGATCGTTTGAAATCTGAAGCACTAAACCTTGATGAAGATGAT GAGGGAGAACAAACTGTTAGCAATGAACCTAAAAAGGACCAAGGCGCTTGTTCATTGTCA ACATCTGCTGGTACTAGTGCTGAACTTTTTGTTAATCAACCGAATAATGTTGTGAATAAA ATGGTTGAAACCAAAGCAGAACGCAAGAAAAAAGCTAAAGTTTCCACATCATCTGCATCC ACCTCACGTTCCATGACAAGGCCAGCTGCAGGTACTCTAGTAGTGTGCCCTGCTAGTGTT CTTAAGCAGTGGTCTAACGAATTAACTGACAAGGTTAGCGAAAGTGCTAAATTATCTGTT TTAGTCTACCATGGTGGTGCAAGGACCAAAGATCCACGTGAGCTGGCAAAATACGATGTA GTTGTTACTACATATACAATTGTGGCCAATGAAGTACCTAAACAGATGGCTGATGATGAC GCAGATCAAAAGAACAGTGAAGAACCCTCTGCTAGCAATAAAAGAAAGCCATCGGCGAAT ATGCAAAACAAGGCTAAGAAAAAGAAGAAGAAACTTAAGGACTCAAACTTTGACCTTGAC AGTGGTCCAATTGCAAGAGTGCGATGGTTTAGGGTTGTGCTTGATGAAGCTCAGACAATA AAAAACTTCCGAACTGTAGTGGCCAGAGCCTGTTGTGGGCTAAGAGCAAAGCGGAGATGG TGCTTATCAGGAACACCTATACAAAATGCAATTGATGATCTGTTTAGCTATTTCCGTTTC TTGAAATATGATCCGTATTGCACGTATAACTCGTTTTGCACAATGATTAAGCACCCAATT GCTAGAGATGCAATTAATGGATACAAGAAACTTCAGGCTGTGCTGAAGGTAGTTCTCCTG CGTCGTACGAAAGAAACTGTGATCAATGGCAAACCAATAATAAATTTACCTCCTAAGACA ATTAATCTGAATAAAGTAGATTTCACACAAGAGGAGCGGTCGTTTTATTTGATGCTGGAA GAACGCTCTCGGCAACAATTCAAGGCATTTGCTGCGGCTGGGACACTCAAACAAAACTAT GCCAACATCCTTTTAATGTTGCTGCGACTTCGGCAAGCCTGTGATCATCCTATTCTTGTA AAGGGCAATCAGTCAGAATATGGAGGTGATGGTTCTATAGAAATGGCAAAGAAACTTCCT AAGGAAGTGGTGATAGATTTGCTTGCAAAACTGGAAGTGGGGTCAACACTTTGTGGCTTA TGCAATGTAAGCAATCTGGTCTCTATTTTGATGTTCGCCTGTTTTTTATCTTCTTTTCTC TTCTTTTTGGTATAA

Peptide Sequence

PEP ID	Zm00001d049455_P014
PEP Infomation	pep chromosome:B73_RefGen_v4:4:30749749:30757086:-1 gene:Zm00001d049455 transcript:Zm00001d049455_T014 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative SNF2-domain/RING finger domain/helicase domain protein
Sequence	MNENSAIIISDSDDDSIGSIFDDDDQPASAIARLDQNAEGRIINFEDEDWQRSAPAPPST KPTENNNGQYRILPASLTNGRHAESSRYTFGSVDRIHPHANPYMAMRPGHSTSSRIDSVV EKHNSSTADANDNNKRVLPSSFSNGNTSKSMHPIVASETRKLPLPLSTKKSPNIGENRMG TNIANGNLQPSSSIMARGTSSTLNTHKVDDDDDVIVYGGSSSHRVLPSTFEATNSNNSEV AKGFETHSRLNPENRVLDYAERAVYQEALQNISREKSEDDLPEGVLAVPLLRHQKMALAW MVSKENSSHCAGGILADDQGLGKTVSTIALIQKQRMEQSKFMFVDSDRLKSEALNLDEDD EGEQTVSNEPKKDQGACSLSTSAGTSAELFVNQPNNVVNKMVETKAERKKKAKVSTSSAS TSRSMTRPAAGTLVVCPASVLKQWSNELTDKVSESAKLSVLVYHGGARTKDPRELAKYDV VVTTYTIVANEVPKQMADDDADQKNSEEPSASNKRKPSANMQNKAKKKKKKLKDSNFDLD SGPIARVRWFRVVLDEAQTIKNFRTVVARACCGLRAKRRWCLSGTPIQNAIDDLFSYFRF LKYDPYCTYNSFCTMIKHPIARDAINGYKKLQAVLKVVLLRRTKETVINGKPIINLPPKT INLNKVDFTQEERSFYLMLEERSRQQFKAFAAAGTLKQNYANILLMLLRLRQACDHPILV KGNQSEYGGDGSIEMAKKLPKEVVIDLLAKLEVGSTLCGLCNVSNLVSILMFACFLSSFL FFLV

Transcript Sequence

Transcript ID	Zm00001d049455_T014
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:30749749:30757086:-1 gene:Zm00001d049455 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative SNF2-domain/RING finger domain/helicase domain protein
Sequence	AAGGACTGAATATCCCCCGACCGCAACGGCGCCGGTCTCCCTCGCTCCATCCTTCTAGGC AGGCCCTCGCTCTCCCGTGGATCCTCCGCCGCGCCGCCGCCCCTTTATCTGAGCCATCCA GCGGAGCGGAGATCCATCCGTTGGGGCGTGGATTCAGTCCCTTCCCTTCTCGGTGGTTAC TCCCACAGTGAGGGTAACTCGAATAACTGTGAGTGCTACTGTGAGATGGGTGGTGTGCTC TCTCTTTTAGCTTGGTGATCATCTGAAAAAAGGAAGTGCTGTTTATTTCTGTAAGATAGA AAGCAAACCATTGGTTCATGAATGGTTTAGTCATGCTAAGAAAAACAAAGTTCTAAGAAC ACATATACAGTGCACGTGCTTGCTGGCAATATGAATGAAAACTCTGCCATTATTATTTCG GATAGTGATGATGACTCAATTGGCTCAATATTCGATGATGACGACCAGCCAGCGTCTGCA ATCGCAAGGCTTGATCAAAATGCTGAAGGACGAATAATCAATTTTGAGGATGAAGATTGG CAAAGGAGCGCTCCTGCTCCACCATCGACTAAGCCTACTGAGAACAACAATGGTCAATAC AGGATTCTTCCAGCATCCCTTACGAATGGTAGACATGCTGAGAGTAGTCGTTATACATTT GGTTCAGTGGACAGGATTCATCCCCATGCAAATCCTTATATGGCTATGCGACCGGGCCAT TCTACTTCCAGTAGAATTGATAGCGTAGTGGAAAAGCACAACAGTTCTACAGCAGATGCA AATGACAATAACAAGAGGGTCCTTCCATCATCCTTTTCAAATGGCAACACATCAAAATCT ATGCATCCAATTGTTGCTAGCGAAACACGCAAGCTCCCACTGCCTTTATCCACCAAAAAG TCACCAAATATTGGTGAAAACAGAATGGGGACAAATATTGCCAATGGAAATTTGCAGCCT TCATCTTCAATAATGGCAAGAGGAACTTCTAGTACACTTAATACCCATAAAGTGGATGAT GATGATGATGTCATTGTATATGGAGGTTCTAGCTCACATAGGGTACTGCCTTCAACGTTT GAGGCAACCAATTCTAATAACAGTGAAGTTGCTAAGGGCTTTGAGACACACAGTCGCCTT AATCCTGAAAATAGGGTCTTAGATTACGCTGAGAGAGCAGTATATCAAGAAGCCCTGCAG AATATTAGTCGCGAAAAAAGTGAAGATGATCTGCCTGAGGGTGTGCTAGCAGTACCTCTG CTTAGACATCAGAAAATGGCATTGGCTTGGATGGTTTCAAAGGAGAATAGCTCACATTGT GCTGGTGGAATTCTTGCCGATGATCAGGGCCTTGGGAAGACAGTGTCTACTATTGCCCTT ATACAAAAACAGAGGATGGAACAGTCGAAATTTATGTTTGTTGATTCAGATCGTTTGAAA TCTGAAGCACTAAACCTTGATGAAGATGATGAGGGAGAACAAACTGTTAGCAATGAACCT AAAAAGGACCAAGGCGCTTGTTCATTGTCAACATCTGCTGGTACTAGTGCTGAACTTTTT GTTAATCAACCGAATAATGTTGTGAATAAAATGGTTGAAACCAAAGCAGAACGCAAGAAA AAAGCTAAAGTTTCCACATCATCTGCATCCACCTCACGTTCCATGACAAGGCCAGCTGCA GGTACTCTAGTAGTGTGCCCTGCTAGTGTTCTTAAGCAGTGGTCTAACGAATTAACTGAC AAGGTTAGCGAAAGTGCTAAATTATCTGTTTTAGTCTACCATGGTGGTGCAAGGACCAAA GATCCACGTGAGCTGGCAAAATACGATGTAGTTGTTACTACATATACAATTGTGGCCAAT GAAGTACCTAAACAGATGGCTGATGATGACGCAGATCAAAAGAACAGTGAAGAACCCTCT GCTAGCAATAAAAGAAAGCCATCGGCGAATATGCAAAACAAGGCTAAGAAAAAGAAGAAG AAACTTAAGGACTCAAACTTTGACCTTGACAGTGGTCCAATTGCAAGAGTGCGATGGTTT AGGGTTGTGCTTGATGAAGCTCAGACAATAAAAAACTTCCGAACTGTAGTGGCCAGAGCC TGTTGTGGGCTAAGAGCAAAGCGGAGATGGTGCTTATCAGGAACACCTATACAAAATGCA ATTGATGATCTGTTTAGCTATTTCCGTTTCTTGAAATATGATCCGTATTGCACGTATAAC TCGTTTTGCACAATGATTAAGCACCCAATTGCTAGAGATGCAATTAATGGATACAAGAAA CTTCAGGCTGTGCTGAAGGTAGTTCTCCTGCGTCGTACGAAAGAAACTGTGATCAATGGC AAACCAATAATAAATTTACCTCCTAAGACAATTAATCTGAATAAAGTAGATTTCACACAA GAGGAGCGGTCGTTTTATTTGATGCTGGAAGAACGCTCTCGGCAACAATTCAAGGCATTT GCTGCGGCTGGGACACTCAAACAAAACTATGCCAACATCCTTTTAATGTTGCTGCGACTT CGGCAAGCCTGTGATCATCCTATTCTTGTAAAGGGCAATCAGTCAGAATATGGAGGTGAT GGTTCTATAGAAATGGCAAAGAAACTTCCTAAGGAAGTGGTGATAGATTTGCTTGCAAAA CTGGAAGTGGGGTCAACACTTTGTGGCTTATGCAATGTAAGCAATCTGGTCTCTATTTTG ATGTTCGCCTGTTTTTTATCTTCTTTTCTCTTCTTTTTGGTATAATCATGAGCCTCATGT GTACTTCTGGATGTGTTATTAGTTGGATTGTTGGGTCGTCGTTGGGCATGGGGGTTCCCT TGTAGATTAATTACCCCAACATAGGATGAATTGTTTAGAAGTTTTGTCCATGTGGTCCCT AATGCAGATTTTCTGCACTAGCTCCTCCAAAATCTGGGTATGTATACACCTTAAAGATTT CTAAAAAAACTAGACATTT