Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049449_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:4:30659129:30669484:1 gene:Zm00001d049449 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cold regulated protein homolog1 description: cold regulated protein homolog1
Sequence	ATGTTCGATTACATCGATAGACTCTTCATCATGGTTCGCCCTAGGAAGCTTATGTACATG GCCATTGATGGTGTGGCTCCACGTGCTAAAATGAACCAACAGCGTTCTAGACGATTCAGA GCTGCAAAAGATGCAGCTGATGCGGCTGCAGAGGAAGAACGGTTGCGTGAAGAGTTTGAG AGGGAAGGAAGAAGGCTTCCTGCAAAACAACAATCACAAACTTGTGATTCTAATGTTATT ACTCCAGGAACCGAGTTTATGGCTGTTCTTTCAGTTGCGTTACAGTACTACATTCATCAA AGACTGAATTATGATCCTGGATGGAAAAAAATCAAAGTTATTCTATCTGATGCCAATGTT CCTGGCGAAGGGGAGCATAAAATAATGTCGTATATTCGTGGTCAACGGAATCTCCCTGGA TTTAATCCAAACACACGCCATTGCTTATATGGCCTGGATGCAGACCTCATAATGTTAGCT TTAGCAACTCATGAAGTACACTTCTCTATATTGAGAGAGGTAGTTTTTACACCTGGGCAG CAGGACAAATGCTTCTTATGTGGTCAGGTGGGGCATCTAGCCGCTAATTGTGAAGGAAAG GCAAAGAGAAAAGCTGGGGAATACGATGAGAAAGGTGAAGCTATTGTTCCAAAGAAACCA TACCAGTTCTTGAATATCTGGACCCTTCGGGAGTACTTAGAATATGAGTTCAGAATGCCA AATCCGCCTTTCCAGATTGATTTTGAACGGATTGTTGATGATTTCATCTTCATGTGCTTT TTCGTTGGCAACGATTTTCTTCCGCATATGCCAACACTAGAGATCAGGGAGGGAGCTATC AATCTATTAATGGCTGTGTACAAGAAAGAATTTCCTTCAATGGGTGGCTATTTAACAGAT TCTTGCACGCCGGATCTGAATAGAGTCGAACACTTCATTCAAGCAGTTGGCTCTTATGAG GATAAAATATTTCAGAAAAGGGCGCGTTTGCATCAGCGTCAAGCAGAAAGAATAAAACGG GAAAAGGCCCAAGCAAAGCGCGGGGATGATCTGGATCCCCATGTCAGAGATGATCTTATT GTACCTGTTTCAAATTTCCGAGGGTCCCGCCTTGCATCTGGAGCAGTACCTTCACCATAT GAACAGAATGGATCTCAGAGAGAAAGGTACAACCAAACTCGGAAAGCTCCAAGAGTATCA TCATCAGGTTCCAGCATTGCTGCTGCTATCGTTGAGGCTGAACAAGATCTTGAAGCACAG GAGCGTGAAAATAAAGAAGAGTTGAAGTCTATGCTTAAGGATGCTCTTCGTGAGAAATCA GATGTCTTCAATTCTGAAAATTCAGAGGAGGACAAGGTAAAGCTTGGAGAACCAGGATGG AGGGATAGGTACTATGAAGAGAAGTTTGGGGCAAGGACACCTGAACGGATGGAAGAAATA CGGAGGGATGTTGCTCTCAAATATACTGAAGGATTGTGTTGGGTTATGCACTACTACTAT GAAGGGGTGTGCTCATGGCAATGGTTTTATCCTTATCATTATGCTCCTTTTGCTTCGGAT TTAACGAGTCTGAGTCAGCTCAATATAACTTTCGAACTTGGGTCACCATTCAAGCCATTT GATCAGCTAATGGGGGTTTTCCCTGCTGCAAGTGCCCATGCACTTCCTTTAAAGTATCGG CAACTGATGACTGATCCAAATTCACCAATAATTGATTTTTATCCAACTGATTTTGAAGTA GATATGAATGGGAAAAGATTCTCTTGGCAGGGGATAGCAAAACTGCCCTTTATAGAAGAA GATCGGTTGCTGGCTGAGATTAAAAAAGTTGAGGATACTTTGACGCCTGAAGAAGCAAGG AGAAACAGTACCATGTGCAATATGCTTTTTGTGAATGGCGCCCATTCACTTTCTCCCTAT ATCTACTCTCTCAACAGTAAATTCGGGCATCTGCCAGACAAAGACCGTGGTGCAATCAAA GAAAAACTTGATCCTTCAGCTAGTGGAGGAATGAATGGTTACATTGCACTCTGTGGTGGG GACCCGTCCCCTCCTGTCTTCAGATCTCCTGTAGATGGGCTTGAGGACATCATGGATAAT CAAGTGATATGCTCAATCTACAAGCTTCCAGATCCACACAAGCACATCGCTCGTCCACCA GCTGGTGTTATCATACCCAAGAAGAGTGTAGAAGCCGGTGATCTGAAACCACCACCAGTG CTGTGGCATGAAGACAGCGGTAGGAGGCCTCATGATAACAACCACCGGAGGCCTTATGAT AACAGCAACAGGCAAAACCCATCAGGAGCTCTATCTGGCCGCCAACTCGGGGAAGCTGCC CATCGACTTGTTGTAAACAGCTTGAATGTTCGGGGTGGTGGGCAAAATAATTCCCCATCT ATGCCATATCAGACAATGATGAGTGGTATGAACTATCCAAATGGAAGGCATCATGTGGGT AACCATGGAGTGCCTCCGAGAATGGAACAGCCTGCTGGTCGTTCTGGCTGGCATGTTTCT GATGATAACATGACCAATGGTCAAGCAGCTTATGGTCAGTATCAGCCTGAAAGGTTGGGA CCTTCCCGGCATGAACGAGGTAACCATGGAAGGCAACAGTATAACCCATATGCAAGAGAT AACCACCATGATTCTAGTGGAAGAGTTCAGCCACCTGGATACCATCAAAACCGTGGCAAC CCACAGTCTGCTGCTCCATCAGCAGGTCCTGGACTGTATGGGCCATACCCCCCAGCATAT GCTGGTGGTTATTCTGGGGGATACCAGCCTGTACCATATGGGGGTCAACAATGGCAGCAG CGACCTTATGGAGGCGGGACACCCCCCACAAGACCTAACTCACACCAATCACAAAACCGT TATGGTACCTTAGACAGAAGTTCTAACAAGAGGTCCTCAGGTCATGGCCAATACTAA

Peptide Sequence

PEP ID	Zm00001d049449_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:4:30659129:30669484:1 gene:Zm00001d049449 transcript:Zm00001d049449_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cold regulated protein homolog1 description: cold regulated protein homolog1
Sequence	MFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLREEFE REGRRLPAKQQSQTCDSNVITPGTEFMAVLSVALQYYIHQRLNYDPGWKKIKVILSDANV PGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQ QDKCFLCGQVGHLAANCEGKAKRKAGEYDEKGEAIVPKKPYQFLNIWTLREYLEYEFRMP NPPFQIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTD SCTPDLNRVEHFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLI VPVSNFRGSRLASGAVPSPYEQNGSQRERYNQTRKAPRVSSSGSSIAAAIVEAEQDLEAQ ERENKEELKSMLKDALREKSDVFNSENSEEDKVKLGEPGWRDRYYEEKFGARTPERMEEI RRDVALKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLTSLSQLNITFELGSPFKPF DQLMGVFPAASAHALPLKYRQLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEE DRLLAEIKKVEDTLTPEEARRNSTMCNMLFVNGAHSLSPYIYSLNSKFGHLPDKDRGAIK EKLDPSASGGMNGYIALCGGDPSPPVFRSPVDGLEDIMDNQVICSIYKLPDPHKHIARPP AGVIIPKKSVEAGDLKPPPVLWHEDSGRRPHDNNHRRPYDNSNRQNPSGALSGRQLGEAA HRLVVNSLNVRGGGQNNSPSMPYQTMMSGMNYPNGRHHVGNHGVPPRMEQPAGRSGWHVS DDNMTNGQAAYGQYQPERLGPSRHERGNHGRQQYNPYARDNHHDSSGRVQPPGYHQNRGN PQSAAPSAGPGLYGPYPPAYAGGYSGGYQPVPYGGQQWQQRPYGGGTPPTRPNSHQSQNR YGTLDRSSNKRSSGHGQY

Transcript Sequence

Transcript ID	Zm00001d049449_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:30659129:30669484:1 gene:Zm00001d049449 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cold regulated protein homolog1 description: cold regulated protein homolog1
Sequence	GCCCTCTCCAACAACATTTGCTGAGGTTTTCCAGTGCATGTTCGATTACATCGATAGACT CTTCATCATGGTTCGCCCTAGGAAGCTTATGTACATGGCCATTGATGGTGTGGCTCCACG TGCTAAAATGAACCAACAGCGTTCTAGACGATTCAGAGCTGCAAAAGATGCAGCTGATGC GGCTGCAGAGGAAGAACGGTTGCGTGAAGAGTTTGAGAGGGAAGGAAGAAGGCTTCCTGC AAAACAACAATCACAAACTTGTGATTCTAATGTTATTACTCCAGGAACCGAGTTTATGGC TGTTCTTTCAGTTGCGTTACAGTACTACATTCATCAAAGACTGAATTATGATCCTGGATG GAAAAAAATCAAAGTTATTCTATCTGATGCCAATGTTCCTGGCGAAGGGGAGCATAAAAT AATGTCGTATATTCGTGGTCAACGGAATCTCCCTGGATTTAATCCAAACACACGCCATTG CTTATATGGCCTGGATGCAGACCTCATAATGTTAGCTTTAGCAACTCATGAAGTACACTT CTCTATATTGAGAGAGGTAGTTTTTACACCTGGGCAGCAGGACAAATGCTTCTTATGTGG TCAGGTGGGGCATCTAGCCGCTAATTGTGAAGGAAAGGCAAAGAGAAAAGCTGGGGAATA CGATGAGAAAGGTGAAGCTATTGTTCCAAAGAAACCATACCAGTTCTTGAATATCTGGAC CCTTCGGGAGTACTTAGAATATGAGTTCAGAATGCCAAATCCGCCTTTCCAGATTGATTT TGAACGGATTGTTGATGATTTCATCTTCATGTGCTTTTTCGTTGGCAACGATTTTCTTCC GCATATGCCAACACTAGAGATCAGGGAGGGAGCTATCAATCTATTAATGGCTGTGTACAA GAAAGAATTTCCTTCAATGGGTGGCTATTTAACAGATTCTTGCACGCCGGATCTGAATAG AGTCGAACACTTCATTCAAGCAGTTGGCTCTTATGAGGATAAAATATTTCAGAAAAGGGC GCGTTTGCATCAGCGTCAAGCAGAAAGAATAAAACGGGAAAAGGCCCAAGCAAAGCGCGG GGATGATCTGGATCCCCATGTCAGAGATGATCTTATTGTACCTGTTTCAAATTTCCGAGG GTCCCGCCTTGCATCTGGAGCAGTACCTTCACCATATGAACAGAATGGATCTCAGAGAGA AAGGTACAACCAAACTCGGAAAGCTCCAAGAGTATCATCATCAGGTTCCAGCATTGCTGC TGCTATCGTTGAGGCTGAACAAGATCTTGAAGCACAGGAGCGTGAAAATAAAGAAGAGTT GAAGTCTATGCTTAAGGATGCTCTTCGTGAGAAATCAGATGTCTTCAATTCTGAAAATTC AGAGGAGGACAAGGTAAAGCTTGGAGAACCAGGATGGAGGGATAGGTACTATGAAGAGAA GTTTGGGGCAAGGACACCTGAACGGATGGAAGAAATACGGAGGGATGTTGCTCTCAAATA TACTGAAGGATTGTGTTGGGTTATGCACTACTACTATGAAGGGGTGTGCTCATGGCAATG GTTTTATCCTTATCATTATGCTCCTTTTGCTTCGGATTTAACGAGTCTGAGTCAGCTCAA TATAACTTTCGAACTTGGGTCACCATTCAAGCCATTTGATCAGCTAATGGGGGTTTTCCC TGCTGCAAGTGCCCATGCACTTCCTTTAAAGTATCGGCAACTGATGACTGATCCAAATTC ACCAATAATTGATTTTTATCCAACTGATTTTGAAGTAGATATGAATGGGAAAAGATTCTC TTGGCAGGGGATAGCAAAACTGCCCTTTATAGAAGAAGATCGGTTGCTGGCTGAGATTAA AAAAGTTGAGGATACTTTGACGCCTGAAGAAGCAAGGAGAAACAGTACCATGTGCAATAT GCTTTTTGTGAATGGCGCCCATTCACTTTCTCCCTATATCTACTCTCTCAACAGTAAATT CGGGCATCTGCCAGACAAAGACCGTGGTGCAATCAAAGAAAAACTTGATCCTTCAGCTAG TGGAGGAATGAATGGTTACATTGCACTCTGTGGTGGGGACCCGTCCCCTCCTGTCTTCAG ATCTCCTGTAGATGGGCTTGAGGACATCATGGATAATCAAGTGATATGCTCAATCTACAA GCTTCCAGATCCACACAAGCACATCGCTCGTCCACCAGCTGGTGTTATCATACCCAAGAA GAGTGTAGAAGCCGGTGATCTGAAACCACCACCAGTGCTGTGGCATGAAGACAGCGGTAG GAGGCCTCATGATAACAACCACCGGAGGCCTTATGATAACAGCAACAGGCAAAACCCATC AGGAGCTCTATCTGGCCGCCAACTCGGGGAAGCTGCCCATCGACTTGTTGTAAACAGCTT GAATGTTCGGGGTGGTGGGCAAAATAATTCCCCATCTATGCCATATCAGACAATGATGAG TGGTATGAACTATCCAAATGGAAGGCATCATGTGGGTAACCATGGAGTGCCTCCGAGAAT GGAACAGCCTGCTGGTCGTTCTGGCTGGCATGTTTCTGATGATAACATGACCAATGGTCA AGCAGCTTATGGTCAGTATCAGCCTGAAAGGTTGGGACCTTCCCGGCATGAACGAGGTAA CCATGGAAGGCAACAGTATAACCCATATGCAAGAGATAACCACCATGATTCTAGTGGAAG AGTTCAGCCACCTGGATACCATCAAAACCGTGGCAACCCACAGTCTGCTGCTCCATCAGC AGGTCCTGGACTGTATGGGCCATACCCCCCAGCATATGCTGGTGGTTATTCTGGGGGATA CCAGCCTGTACCATATGGGGGTCAACAATGGCAGCAGCGACCTTATGGAGGCGGGACACC CCCCACAAGACCTAACTCACACCAATCACAAAACCGTTATGGTACCTTAGACAGAAGTTC TAACAAGAGGTCCTCAGGTCATGGCCAATACTAATCCCTAAATGCATAGGCCCTTTTTGA GTAAAGGGGAAATATAATCCAAATCCTTGACAAATCACTAAGCAATGCCTTCATCCAAAC AAAACCCCTTACTGTTGTGGCCCTATCCTTGTTAGTAATCACCAAACAATGCCTTAGTAC AAACAACCCCTTACTGTTATAGTCCTGTTCCTGTTAGTAAAAATTATCAGGTATCATGAA TGATGTCACCTTAGCCAGTGACCTACTACAAGCTTCTTGGTCGATTTATCAAGAACTCCA AGGAGCAAATGTTGTTAAATATTAGCTTTGCTGCCAGATGGTGGCATCGGCTGTTCTTTC ATTTGTGTTTCTCATTCATGGGGGTTGGTTATATAGGTGATTGAAAAGTTTTGAACTGTG GTGATAGTGTATGTAACAAACATGTATACAGTTAGTTGATGATGGATATATCCACCATCA TGTATTTGTTTCTTGAGATGACAGTAAAGCGTGATTTCTATGTCATGGCTCCTTTGTCGT TTT