Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049409_T018
CDS Infomation

cds chromosome:B73_RefGen_v4:4:29645691:29648371:1 gene:Zm00001d049409 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aconitase1 description: aconitase1
Sequence

ATGAAGCATGGTAGTGTTGTTATAGCAGCAATAACTAGCTGCACAAACACCTCAAATCCT
AGTGTTATGCTTGGTGCTGGTCTTGTAGCTAAGAAAGCTTGCGAGTTGGGTCTTGAGGTT
AAACCATGGGTGAAGACAAGCCTTGCCCCTGGATCAGGAGTTGTCACGAAGTACTTGCTT
CAGAGTGGTCTTCAAGAATACCTCAACCAGCAAGGATTCCATATCGTTGGCTATGGCTGT
ACCACTTGCATTGGAAACTCTGGTGATCTCGATGAATCTGTATCAACTGCCATTACAGAA
AATGATGTTGTTGCTGCTGCTGTTTTGTCGGGTAACCGTAACTTCGAGGGTCGTGTGCAC
CCTTTAACTCGGGCTAACTATCTTGCTTCGCCACCTCTTGTTGTTGCTTATGCACTTGCC
GGAACTGTTGATATTGATTTTGAGAAAGAGCCCATTGGATTTGGAAAGGATGGCAAGGAA
GTCTACTTCAGGGATATATGGCCCTCGACAGAAGAAATTGCGCAGGTTGTCCAATCCAGT
GTGCTGCCTGACATGTTCAAGGGCACCTATGAGGCTATCACAAAAGGCAACCCAATGTGG
AACCAGCTAACTGTCCCAGAAGCATCACTCTACTCATGGGATTCCAAATCCACTTACATT
CATGAGCCCCCTTACTTTAAGGACATGACCATGTCCCCACCTGGCCCCTCTACAGTGAAA
GATGCCTACTGCTTGCTGAACTTCGGGGACAGCATTACTACAGATCACATTTCACCTGCA
GGAAGCATACACAAAGACAGTCCTGCTGCCAAGTATTTGATGGAGCGTGGTGTGGACCGG
AAGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAAGTAATGGCAAGGGGAACG
TTTGCAAACATTAGGATCGTGAACAAGTTTTTGAACGGAGAAGTTGGACCCAAGACCATT
CATGTTCCTACTGGGGAGAAGCTTTCTGTTTTTGATGCGGCCATGAGATACAAATCTGAG
GGCCATGCTACTATAATCCTCGCTGGCGCTGAGTATGGAAGCGGCAGTTCTCGTGATTGG
GCTGCTAAGGGTCCGATGCTCCTGGGAGTTAAAGCTGTAATTGCCAAGAGCTTTGAGCGT
ATCCACAGAAGCAACTTGGTGGGGATGGGAATCATTCCTCTGTGCTTCAAAGCTGGTGAG
GATGCTGATTCACTTGGCCTCACTGGACATGAGCGGTACAGCATCGATCTCCCTACCAAC
CTCAGTGAGATCCGTCCCGGCCAGGATGTGACTGTTACTACCGACAATGGGAAATCTTTC
ACTTGCATCGTTCGCTTTGACACTGAGGTGGAGCTGGCGTACTTCAACCATGGAGGCATC
CTCCCTTATGTCATCCGCAACTTGGCAGCTGCGCATAACTGA

Peptide Sequence

PEP ID

Zm00001d049409_P018
PEP Infomation

pep chromosome:B73_RefGen_v4:4:29645691:29648371:1 gene:Zm00001d049409 transcript:Zm00001d049409_T018 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aconitase1 description: aconitase1
Sequence

MKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLEVKPWVKTSLAPGSGVVTKYLL
QSGLQEYLNQQGFHIVGYGCTTCIGNSGDLDESVSTAITENDVVAAAVLSGNRNFEGRVH
PLTRANYLASPPLVVAYALAGTVDIDFEKEPIGFGKDGKEVYFRDIWPSTEEIAQVVQSS
VLPDMFKGTYEAITKGNPMWNQLTVPEASLYSWDSKSTYIHEPPYFKDMTMSPPGPSTVK
DAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRKDFNSYGSRRGNDEVMARGT
FANIRIVNKFLNGEVGPKTIHVPTGEKLSVFDAAMRYKSEGHATIILAGAEYGSGSSRDW
AAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERYSIDLPTN
LSEIRPGQDVTVTTDNGKSFTCIVRFDTEVELAYFNHGGILPYVIRNLAAAHN

Transcript Sequence

Transcript ID

Zm00001d049409_T018
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:29645691:29648371:1 gene:Zm00001d049409 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aconitase1 description: aconitase1
Sequence

GGGTTTTGCAGTGCCAAAGGAGCAGCAGGATAAGGTTGTCAAATTTGACTTTCATGGGCA
GCCAGCAGAAATGAAGCATGGTAGTGTTGTTATAGCAGCAATAACTAGCTGCACAAACAC
CTCAAATCCTAGTGTTATGCTTGGTGCTGGTCTTGTAGCTAAGAAAGCTTGCGAGTTGGG
TCTTGAGGTTAAACCATGGGTGAAGACAAGCCTTGCCCCTGGATCAGGAGTTGTCACGAA
GTACTTGCTTCAGAGTGGTCTTCAAGAATACCTCAACCAGCAAGGATTCCATATCGTTGG
CTATGGCTGTACCACTTGCATTGGAAACTCTGGTGATCTCGATGAATCTGTATCAACTGC
CATTACAGAAAATGATGTTGTTGCTGCTGCTGTTTTGTCGGGTAACCGTAACTTCGAGGG
TCGTGTGCACCCTTTAACTCGGGCTAACTATCTTGCTTCGCCACCTCTTGTTGTTGCTTA
TGCACTTGCCGGAACTGTTGATATTGATTTTGAGAAAGAGCCCATTGGATTTGGAAAGGA
TGGCAAGGAAGTCTACTTCAGGGATATATGGCCCTCGACAGAAGAAATTGCGCAGGTTGT
CCAATCCAGTGTGCTGCCTGACATGTTCAAGGGCACCTATGAGGCTATCACAAAAGGCAA
CCCAATGTGGAACCAGCTAACTGTCCCAGAAGCATCACTCTACTCATGGGATTCCAAATC
CACTTACATTCATGAGCCCCCTTACTTTAAGGACATGACCATGTCCCCACCTGGCCCCTC
TACAGTGAAAGATGCCTACTGCTTGCTGAACTTCGGGGACAGCATTACTACAGATCACAT
TTCACCTGCAGGAAGCATACACAAAGACAGTCCTGCTGCCAAGTATTTGATGGAGCGTGG
TGTGGACCGGAAGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAAGTAATGGC
AAGGGGAACGTTTGCAAACATTAGGATCGTGAACAAGTTTTTGAACGGAGAAGTTGGACC
CAAGACCATTCATGTTCCTACTGGGGAGAAGCTTTCTGTTTTTGATGCGGCCATGAGATA
CAAATCTGAGGGCCATGCTACTATAATCCTCGCTGGCGCTGAGTATGGAAGCGGCAGTTC
TCGTGATTGGGCTGCTAAGGGTCCGATGCTCCTGGGAGTTAAAGCTGTAATTGCCAAGAG
CTTTGAGCGTATCCACAGAAGCAACTTGGTGGGGATGGGAATCATTCCTCTGTGCTTCAA
AGCTGGTGAGGATGCTGATTCACTTGGCCTCACTGGACATGAGCGGTACAGCATCGATCT
CCCTACCAACCTCAGTGAGATCCGTCCCGGCCAGGATGTGACTGTTACTACCGACAATGG
GAAATCTTTCACTTGCATCGTTCGCTTTGACACTGAGGTGGAGCTGGCGTACTTCAACCA
TGGAGGCATCCTCCCTTATGTCATCCGCAACTTGGCAGCTGCGCATAACTGAGGCAAGAT
CACACACCGTTTGACCCACAATGGCAGTGGCAGGCTCCATGTTCCCAGGGCTAGCGACCT
GGTTCTCAATGTAGTGACATTTGTGATGGATCTAGGGGTCTCTTTGTCGATTCAGCCCAT
AAATAAAGTGTGAAATAAAAGCCGCAGGTGGAGGCAGGAACCTGCTGATTGAGGGAACAG
TTTTGCCTGTGTTTGGTTACATGAAATATCTGTTTCACAGATGTGTAGAGCATGGTGTAA
ATGCTTCCTGTGCTGTTACTTTCGTTTCGACAAATTGATTATGCTGTAGCCCTTCAGGTT
TCATCTAGACATTTCGGTGTCTTGGAGCACATTCTTTTTTCTGATGTTGGTAATGTTTTC
TGTAGGCTAGTAGTAGCCAATATTATGTTT