Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049408_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:29598344:29599729:1 gene:Zm00001d049408 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence	ATGATTACGGCGGAGAAGAGCCCCGAAAGGGAGGAGGAGGAGGCGAACCCGCGCGCGGAG GCTTTTCTGGAGATCATCTGCCGCGTCCCGGCGGGGGAGGTGGAGGCGGCGCTGTCCGCT TGCGGCATCGGCCCCACGGCCGAGGTCGAGGAACTGGTGCTCAAGTCCCGCGAATGCTAC AAGCGCCCTAAGTCCGCCGTCCGCTTCTTCCGCTGGGCGGGACAGTCCGTGTCGCACACC GCCTACGCATGGAACCTCCTTGTCGACATCCTCGGCAAGGCCGCCATGTTCGAGTCCATG TGGGACGCCATCCGCTCCATGAAGCAGGAGGGCGGCAGCGGGCTCGTCTCCGTCGCCACC TTCGCCTCCTACTGCACCGCTGGCAACATCAAAGATGCAATCGCGGCCTTAGACGTCATG GACCGCTACGGCCTCAAGCACGACGCCGTCGCGCTCAACTCGCTGCTCTCGGCGATTTGC CGCGTCGAGGGTCGCGTGCAGGATGCGCAGGACGTCTTCGAGCGTACCAAGGCCACCATC CCACCCGACGGCGACACGTTCGCGATACTGCTCGAGGCATGGGAGAAGGAGGGGAACGCG GTGCGCGCCAAGAGCGTCTTTGGCGAGATGGTCGTCCGCATCGGCTGGGACGCAGCCAAC GTATCCGCGTACGACTCCTTCCTCTCCACTCTCGTTCGGGGCGGCCTGTTGGACGAGGCC TTCAAATTTCTGCAGGTGATGCGGAGCAAGGGCTGCTTGCCGGGGATCAATTTTTTTTCT ACAGCTGTGGATCTGGTCGTCCGCAAGGGTGACTACCTCAACGCCGTAGCCATCTGGCAC ATGATGGTCTCTGAAGCCGGCCTCGTTCCCAATTTCTCAATGTACAGCGCCATGATTGGC CTCCACTGCAATGCTGGTAGCATAGACGATGCTCTTGGGTTGCTTGACGAAATGCCCCTC AACGACGTCTTTGCAAATTCTGTCACATACCACACCATACTGGAAGGATTCATCAAGCAT CGCAAGGCTCGTGAGGCTGAAAGTTTCCTAACGGAGATGAGCAAGAATGAGCAACTACCT ACTGCATCCAATTGCGCTGCTGCTATCAGCTTGTTCTTTAAGGAGTTTAACCCATCTGCA TCAATCGACGTGTGGCGCTGTATTGAGGAGCACAACATTACCCTAGCTGAGGACTCTGCC AAAGAGCTAATAGCAGGGCTGCTTGATTTTGGCAGGTTTACTGAGGTGACGAAGCGTGCT GATGAGATGATTGACATGAGAGTTGAGTTGTCACGGTCCACAATGGAGAATATGAAGCGT GCTTTTGCTAAGGCTGGCAGGCACCAATCATATGACAACATTGCAAGAAGGCTAAAGCGA TATTAG

Peptide Sequence

PEP ID	Zm00001d049408_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:29598344:29599729:1 gene:Zm00001d049408 transcript:Zm00001d049408_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence	MITAEKSPEREEEEANPRAEAFLEIICRVPAGEVEAALSACGIGPTAEVEELVLKSRECY KRPKSAVRFFRWAGQSVSHTAYAWNLLVDILGKAAMFESMWDAIRSMKQEGGSGLVSVAT FASYCTAGNIKDAIAALDVMDRYGLKHDAVALNSLLSAICRVEGRVQDAQDVFERTKATI PPDGDTFAILLEAWEKEGNAVRAKSVFGEMVVRIGWDAANVSAYDSFLSTLVRGGLLDEA FKFLQVMRSKGCLPGINFFSTAVDLVVRKGDYLNAVAIWHMMVSEAGLVPNFSMYSAMIG LHCNAGSIDDALGLLDEMPLNDVFANSVTYHTILEGFIKHRKAREAESFLTEMSKNEQLP TASNCAAAISLFFKEFNPSASIDVWRCIEEHNITLAEDSAKELIAGLLDFGRFTEVTKRA DEMIDMRVELSRSTMENMKRAFAKAGRHQSYDNIARRLKRY

Transcript Sequence

Transcript ID	Zm00001d049408_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:29598344:29599729:1 gene:Zm00001d049408 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence	ATGATTACGGCGGAGAAGAGCCCCGAAAGGGAGGAGGAGGAGGCGAACCCGCGCGCGGAG GCTTTTCTGGAGATCATCTGCCGCGTCCCGGCGGGGGAGGTGGAGGCGGCGCTGTCCGCT TGCGGCATCGGCCCCACGGCCGAGGTCGAGGAACTGGTGCTCAAGTCCCGCGAATGCTAC AAGCGCCCTAAGTCCGCCGTCCGCTTCTTCCGCTGGGCGGGACAGTCCGTGTCGCACACC GCCTACGCATGGAACCTCCTTGTCGACATCCTCGGCAAGGCCGCCATGTTCGAGTCCATG TGGGACGCCATCCGCTCCATGAAGCAGGAGGGCGGCAGCGGGCTCGTCTCCGTCGCCACC TTCGCCTCCTACTGCACCGCTGGCAACATCAAAGATGCAATCGCGGCCTTAGACGTCATG GACCGCTACGGCCTCAAGCACGACGCCGTCGCGCTCAACTCGCTGCTCTCGGCGATTTGC CGCGTCGAGGGTCGCGTGCAGGATGCGCAGGACGTCTTCGAGCGTACCAAGGCCACCATC CCACCCGACGGCGACACGTTCGCGATACTGCTCGAGGCATGGGAGAAGGAGGGGAACGCG GTGCGCGCCAAGAGCGTCTTTGGCGAGATGGTCGTCCGCATCGGCTGGGACGCAGCCAAC GTATCCGCGTACGACTCCTTCCTCTCCACTCTCGTTCGGGGCGGCCTGTTGGACGAGGCC TTCAAATTTCTGCAGGTGATGCGGAGCAAGGGCTGCTTGCCGGGGATCAATTTTTTTTCT ACAGCTGTGGATCTGGTCGTCCGCAAGGGTGACTACCTCAACGCCGTAGCCATCTGGCAC ATGATGGTCTCTGAAGCCGGCCTCGTTCCCAATTTCTCAATGTACAGCGCCATGATTGGC CTCCACTGCAATGCTGGTAGCATAGACGATGCTCTTGGGTTGCTTGACGAAATGCCCCTC AACGACGTCTTTGCAAATTCTGTCACATACCACACCATACTGGAAGGATTCATCAAGCAT CGCAAGGCTCGTGAGGCTGAAAGTTTCCTAACGGAGATGAGCAAGAATGAGCAACTACCT ACTGCATCCAATTGCGCTGCTGCTATCAGCTTGTTCTTTAAGGAGTTTAACCCATCTGCA TCAATCGACGTGTGGCGCTGTATTGAGGAGCACAACATTACCCTAGCTGAGGACTCTGCC AAAGAGCTAATAGCAGGGCTGCTTGATTTTGGCAGGTTTACTGAGGTGACGAAGCGTGCT GATGAGATGATTGACATGAGAGTTGAGTTGTCACGGTCCACAATGGAGAATATGAAGCGT GCTTTTGCTAAGGCTGGCAGGCACCAATCATATGACAACATTGCAAGAAGGCTAAAGCGA TATTAG