Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049407_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:29595235:29597575:-1 gene:Zm00001d049407 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyphenol oxidase chloroplastic
Sequence	ATGGCGACGGCCAGCGCCGCTTCAAGCTTCCTCGTCCCGGCGACTGCTATCGCCCCGACA CCCTCTGCATGCCCATCCACGGTTCCCAAGAACAAGAAGAATGCTGCCGGCCGGCGGCGG CGCACATTGCAGTGCAGGGCCAGCGGCCGGCGGGGCGACGACGAAGACAGCCGCCTCCTC TGGCTGCCCCGGCGGGAAGTGCTGACCGGTCTGGGCGGCGTGGCCGCCAGCTTCGTCGGG TACCCGGATCTGGCTTCCATCGCCCTGGAAGCGAACCCCGTGGAGAGCTGCCGGCGGGGC GAGAAGGTGACGGAGAAGCTGGTGGAGTGCTCGGACCCGAACAGAGACTTCCCGTGCCCG CCGGCGTCACGGGTCCCCATCGTGGACTTCACGCCGGAGGCGAGGGTGACGCGCGTCCGC AGGCCGGCGCACCTCCTGGACCCGGAGTACCAGGAGAAGTACAGGGAGGCGGTGGGGAAG ATGCGGGCGCTGGACGGGTCGAACCCGCTGAGCTTCGCGGCGCAGGCGGCCGTCCACCAG TCCTACTGCGACGGGCACTACCGGCTGGACCCGACGGAGAAGAACCGGCCCTTCGACGTG CACTTCTCGTGGATCTTCGCGCCGTGGCACCGCATGTACATCTACTTCTACGAGCGCGCC CTCGGCCAGCTCATCGGCGACGACACCTTCGCGCTGCCCTATTGGAACTGGGACGCGCCC GCCGGCATGGGGATCCCGGCCATCTTCAAGCAGGGCGTCTCCACGGCCGACAACCCGCTG TACGACCCCTACCGCAACATGGAGAACATGGACGCCCTGCTCGATCTGGACTACCTCAAG AAACCCAGACGCGACACCATCCCTTTCGAGCCGCCGACGGACCCAGCCGCGCGCGCCAAG TACGACGACGCCGTTCAAACCAACCTGTGCACCATATACCTGCAGCAAGTCCGTGACGGC AAGGGCCCCCGTGCTTTCCTCGGCGAGAAGCTGTGCAGCGAGTCGAGCTTCCGGGTGAAG GAGATCAACGAGCGGTCCAAGCGGAGGCAGGCGGACGGGCAGAGCAGCAAGGTGAGCCCA AGCAAGTCGCAGAGCCAGGGCACGCTGGAGCGGATGGCGCACACGACGGTGCACGTGTGG ACGGGGCGGGCGAACCCGGCGACGTGCAGCGCGGAGCAGGGCGGCGTGGTGGGGCACGAC GGCAAGCCGCACTGCCAGGTGGACATGGGGTTCCTGGGCACGGCGGGGCGTGACCCGCTC TTCTACTCGCACCACGCGAACGTGGACCGGATGTGGCACATCTGGTCCACTAGGCTGGGC GGTAAGGGCTTCGACGACCCGGAGTGGCTGGACACCAGCTTCGTGTTCTACGACGACTAC CGGAGCCCGCGGCTGGTGCGGATGAAGTTCCGCGACGTCCTGGACGCGACCAGGCTCGGG TACACGTACGACAAGGAGTCGGAGGCGGCGCTGCCGTGGCTGAACAGCAAGCCGACCCGG TTCTCCGGCGGCGGCAAGGCGAAGGCGAAGGCGGCGCCCAAGGTGGCGTCGGAGTTCCCG CTGACCCTGACGGACGAGGCCGTGGACGTGCCGGCGGTGGCGGTCCCGGCGCGGCAGGCC GGGAAGGACCTGGTGCTGCTGATCGAGGGCATCGAGTACGACCCCCAGATCAACAACAAG TTCGACGTGGTCATCAACGTGGCCCGGGAGGACGCCGCGAGGGTGGGGCCTAAGGACAGC GAGTACGCCGGCAGCTTCAGCGCCGTGCCCAGCTCCAACGCCGCCGGTGGCACGCTGGTG GGCAAGTTCACGCTCGCCCTCGACGGCGTGCTCGCCGACCTCGGGCTCGCCGGCGCGAGC GCCGTCGACATCGTGCTCGTCCCTCACACGGAGGGCGAGATCAAGCTGTACTTGCCCCCG ACCATCGAGAACGCGTGA

Peptide Sequence

PEP ID	Zm00001d049407_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:29595235:29597575:-1 gene:Zm00001d049407 transcript:Zm00001d049407_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyphenol oxidase chloroplastic
Sequence	MATASAASSFLVPATAIAPTPSACPSTVPKNKKNAAGRRRRTLQCRASGRRGDDEDSRLL WLPRREVLTGLGGVAASFVGYPDLASIALEANPVESCRRGEKVTEKLVECSDPNRDFPCP PASRVPIVDFTPEARVTRVRRPAHLLDPEYQEKYREAVGKMRALDGSNPLSFAAQAAVHQ SYCDGHYRLDPTEKNRPFDVHFSWIFAPWHRMYIYFYERALGQLIGDDTFALPYWNWDAP AGMGIPAIFKQGVSTADNPLYDPYRNMENMDALLDLDYLKKPRRDTIPFEPPTDPAARAK YDDAVQTNLCTIYLQQVRDGKGPRAFLGEKLCSESSFRVKEINERSKRRQADGQSSKVSP SKSQSQGTLERMAHTTVHVWTGRANPATCSAEQGGVVGHDGKPHCQVDMGFLGTAGRDPL FYSHHANVDRMWHIWSTRLGGKGFDDPEWLDTSFVFYDDYRSPRLVRMKFRDVLDATRLG YTYDKESEAALPWLNSKPTRFSGGGKAKAKAAPKVASEFPLTLTDEAVDVPAVAVPARQA GKDLVLLIEGIEYDPQINNKFDVVINVAREDAARVGPKDSEYAGSFSAVPSSNAAGGTLV GKFTLALDGVLADLGLAGASAVDIVLVPHTEGEIKLYLPPTIENA

Transcript Sequence

Transcript ID	Zm00001d049407_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:29595235:29597575:-1 gene:Zm00001d049407 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyphenol oxidase chloroplastic
Sequence	GGGCGGGGGCAGTTGTAGAGATATACGGAGGCACACTCGTGCTTTCCCAGCACAACTCAT CACTCATCAGCAATATAATACCCAAGATACAATCTAGGCAGCCTACAATCTAACGTACTC CAGGCTCCAGCTGATTTGTCCACGCGGCATGGCGACGGCCAGCGCCGCTTCAAGCTTCCT CGTCCCGGCGACTGCTATCGCCCCGACACCCTCTGCATGCCCATCCACGGTTCCCAAGAA CAAGAAGAATGCTGCCGGCCGGCGGCGGCGCACATTGCAGTGCAGGGCCAGCGGCCGGCG GGGCGACGACGAAGACAGCCGCCTCCTCTGGCTGCCCCGGCGGGAAGTGCTGACCGGTCT GGGCGGCGTGGCCGCCAGCTTCGTCGGGTACCCGGATCTGGCTTCCATCGCCCTGGAAGC GAACCCCGTGGAGAGCTGCCGGCGGGGCGAGAAGGTGACGGAGAAGCTGGTGGAGTGCTC GGACCCGAACAGAGACTTCCCGTGCCCGCCGGCGTCACGGGTCCCCATCGTGGACTTCAC GCCGGAGGCGAGGGTGACGCGCGTCCGCAGGCCGGCGCACCTCCTGGACCCGGAGTACCA GGAGAAGTACAGGGAGGCGGTGGGGAAGATGCGGGCGCTGGACGGGTCGAACCCGCTGAG CTTCGCGGCGCAGGCGGCCGTCCACCAGTCCTACTGCGACGGGCACTACCGGCTGGACCC GACGGAGAAGAACCGGCCCTTCGACGTGCACTTCTCGTGGATCTTCGCGCCGTGGCACCG CATGTACATCTACTTCTACGAGCGCGCCCTCGGCCAGCTCATCGGCGACGACACCTTCGC GCTGCCCTATTGGAACTGGGACGCGCCCGCCGGCATGGGGATCCCGGCCATCTTCAAGCA GGGCGTCTCCACGGCCGACAACCCGCTGTACGACCCCTACCGCAACATGGAGAACATGGA CGCCCTGCTCGATCTGGACTACCTCAAGAAACCCAGACGCGACACCATCCCTTTCGAGCC GCCGACGGACCCAGCCGCGCGCGCCAAGTACGACGACGCCGTTCAAACCAACCTGTGCAC CATATACCTGCAGCAAGTCCGTGACGGCAAGGGCCCCCGTGCTTTCCTCGGCGAGAAGCT GTGCAGCGAGTCGAGCTTCCGGGTGAAGGAGATCAACGAGCGGTCCAAGCGGAGGCAGGC GGACGGGCAGAGCAGCAAGGTGAGCCCAAGCAAGTCGCAGAGCCAGGGCACGCTGGAGCG GATGGCGCACACGACGGTGCACGTGTGGACGGGGCGGGCGAACCCGGCGACGTGCAGCGC GGAGCAGGGCGGCGTGGTGGGGCACGACGGCAAGCCGCACTGCCAGGTGGACATGGGGTT CCTGGGCACGGCGGGGCGTGACCCGCTCTTCTACTCGCACCACGCGAACGTGGACCGGAT GTGGCACATCTGGTCCACTAGGCTGGGCGGTAAGGGCTTCGACGACCCGGAGTGGCTGGA CACCAGCTTCGTGTTCTACGACGACTACCGGAGCCCGCGGCTGGTGCGGATGAAGTTCCG CGACGTCCTGGACGCGACCAGGCTCGGGTACACGTACGACAAGGAGTCGGAGGCGGCGCT GCCGTGGCTGAACAGCAAGCCGACCCGGTTCTCCGGCGGCGGCAAGGCGAAGGCGAAGGC GGCGCCCAAGGTGGCGTCGGAGTTCCCGCTGACCCTGACGGACGAGGCCGTGGACGTGCC GGCGGTGGCGGTCCCGGCGCGGCAGGCCGGGAAGGACCTGGTGCTGCTGATCGAGGGCAT CGAGTACGACCCCCAGATCAACAACAAGTTCGACGTGGTCATCAACGTGGCCCGGGAGGA CGCCGCGAGGGTGGGGCCTAAGGACAGCGAGTACGCCGGCAGCTTCAGCGCCGTGCCCAG CTCCAACGCCGCCGGTGGCACGCTGGTGGGCAAGTTCACGCTCGCCCTCGACGGCGTGCT CGCCGACCTCGGGCTCGCCGGCGCGAGCGCCGTCGACATCGTGCTCGTCCCTCACACGGA GGGCGAGATCAAGCTGTACTTGCCCCCGACCATCGAGAACGCGTGAGAACTGAGATGAGA TGAGACCCGCCACGCACTGCTGGCTGGCTGTTTCGTCTGTTCACCGTCCCCATGAGCCAG CAGTGGCGATTTTTAAGTTCTAATTGAAGTAGTATATGCCGTCCTGATAATCCTACCGCT TTGTATATATGTTGCCTGGAATTATAATCTCCTCATATTATATAAT