Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049380_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:4:28422658:28429865:1 gene:Zm00001d049380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative aminotransferase class III superfamily protein
Sequence	ATGTTATATCTAATCTCCTCCCGTTTTTGTTTGATCGCTTTTCATCACGCCGTCACCCAG GTTAGCAAGCTGGTGAAATACATTGCTAGTGCTGGAAGCTTGCAAGGGGGGCACAGTTTA TCAGAGCCGTCTGCCAGACATTACAGCTCTGAACCTTCACTTCAGGCGACAGAAGAAAAT GGGTTTAAGGGGCACAGCATGCTGGCTCCATTCACAGCGGGATGGCAGAGCACTGATGTA CACCCATTGGTTATAGAGAGATCAGAGGGTTCTTATGTCTATGACAGCAATGGGAAGAAG TATATTGATGCTCTTGCAGGACTGTGGTGCACAGCTTTAGGTGGTAATGAGCCTCGACTA GTCAAAGCGGCAACTGAGCAATTAAACAAATTACCGTTCTACCATTCCTTTTGGAACCGT ACAACCAAACCCTCATTGGATCTCGCAAATGATATTCTCAGCATGTTCACCGCAAGGGAG ATGGGAAAGGTGTTCTTCACAAATAGTGGTTCAGAAGCAAATGACTCCCAGGTTAAACTA GTGTGGTATTATAATAATGCACTGGGAAGGCCAGACAAGAAGAAATTTATTGCTCGCTCA AAATCGTACCATGGATCAACCTTGATTGCAGCTAGTCTATCAGGTCTGCCAGCGCTTCAT CAGAAGTTTGATCTACCAGCACCTTTTGTCCTGCACACAGACTGCCCTCACTACTGGCGA TTCCGTCTTCCTGATGAGACAGAAGAAGAGTTTTCAACTAGACTTGCCAATAATTTGGAG AATCTTGTCCTCAAAGAAGGACCTGAAACAATTGCTGCTTTCATTGCTGAACCTGTGATG GGCGCTGGTGGTGTTATCCTTCCTCCAAAGACCTATTTTGAGAAGATTCAGGCAGTTCTG AAGAAGTATGACATCTTGTTAATTGCGGATGAGGTCATTACTGCATTTGGAAGACTAGGG ACAATGTTTGGATGTGATATGTATAATATTAAACCAGATCTTGTTTCCATAGCCAAGGCT CTTTCTTCTGCATATATGCCAATTGGAGCAATTCTCGTTAGCCCAGAAATAACGGATGTA ATCTATTCTCAGAGCAATAAACTTGGTTCTTTTGCTCATGGCTTTACATACTCGGGACAT CCTGTTTCTTGTGCCGTTGCTGTAGAAACCTTGAAGATATATAAGGAAAGGAATATTGTA GAACACGTCAACAAAATTGCTCCAAGGTTCCAGGAGGGAATCAAGGCCTTCTCAGGCAGC CCAATTGTTGGGGAGATACGCGGTCTGGGACTGATACTTGGAACTGAATTTGTCGACAAC AAATCTCCAAATGATCCATTTCCAGCTGAATGGGGTGTTGGTTCGATATTTGGCGCGGAG TGCGAGAAGCGTGGGATGCTCATCAGGGTGGCTGGGGACAGCATCATGCTGTCACCCCCG CTGATCATGACTCCCAATGAAGTCGAAGAAATCATAAGCAAATTCGGCGATGCTCTGAAG GCTACAGAGGAACGGATTGTAGAACTGAAATCCAGGAAGAATTAG

Peptide Sequence

PEP ID	Zm00001d049380_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:4:28422658:28429865:1 gene:Zm00001d049380 transcript:Zm00001d049380_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative aminotransferase class III superfamily protein
Sequence	MLYLISSRFCLIAFHHAVTQVSKLVKYIASAGSLQGGHSLSEPSARHYSSEPSLQATEEN GFKGHSMLAPFTAGWQSTDVHPLVIERSEGSYVYDSNGKKYIDALAGLWCTALGGNEPRL VKAATEQLNKLPFYHSFWNRTTKPSLDLANDILSMFTAREMGKVFFTNSGSEANDSQVKL VWYYNNALGRPDKKKFIARSKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR FRLPDETEEEFSTRLANNLENLVLKEGPETIAAFIAEPVMGAGGVILPPKTYFEKIQAVL KKYDILLIADEVITAFGRLGTMFGCDMYNIKPDLVSIAKALSSAYMPIGAILVSPEITDV IYSQSNKLGSFAHGFTYSGHPVSCAVAVETLKIYKERNIVEHVNKIAPRFQEGIKAFSGS PIVGEIRGLGLILGTEFVDNKSPNDPFPAEWGVGSIFGAECEKRGMLIRVAGDSIMLSPP LIMTPNEVEEIISKFGDALKATEERIVELKSRKN

Transcript Sequence

Transcript ID	Zm00001d049380_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:28422658:28429865:1 gene:Zm00001d049380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative aminotransferase class III superfamily protein
Sequence	TGCGTGAACTGAAACTGTAATTGCTTGGTTCAAGATCACGACTTCCTTTCGGACAGTTTT GACGCTCGACCCGACCTCGAGTGGTTCAGAACACTGCAGATCGTTTTTGTTTCAGTTAGT TTGTCCTTTTTAGGGCTACTTTGAAACTTAAATCCCATCTGGGATTCTCGGAGATTGAAG GAAAAATGAGCTAATTTTCTATTCGGTCTAGTTTGAAAACTCCATTTTCTCAACTGATTT CTGTTTTCACAAGCAAAAAAAAAACTAATTTTCCTTGGAAAAATGAAAATCACTTGGAAA AATGTGGTTCCCAAACTAGCCCTCAATCACCGGGAATCCCGAGGGGATTTAAGTTTCCAA ACTAGCACTTAGATGTTATATCTAATCTCCTCCCGTTTTTGTTTGATCGCTTTTCATCAC GCCGTCACCCAGGTTAGCAAGCTGGTGAAATACATTGCTAGTGCTGGAAGCTTGCAAGGG GGGCACAGTTTATCAGAGCCGTCTGCCAGACATTACAGCTCTGAACCTTCACTTCAGGCG ACAGAAGAAAATGGGTTTAAGGGGCACAGCATGCTGGCTCCATTCACAGCGGGATGGCAG AGCACTGATGTACACCCATTGGTTATAGAGAGATCAGAGGGTTCTTATGTCTATGACAGC AATGGGAAGAAGTATATTGATGCTCTTGCAGGACTGTGGTGCACAGCTTTAGGTGGTAAT GAGCCTCGACTAGTCAAAGCGGCAACTGAGCAATTAAACAAATTACCGTTCTACCATTCC TTTTGGAACCGTACAACCAAACCCTCATTGGATCTCGCAAATGATATTCTCAGCATGTTC ACCGCAAGGGAGATGGGAAAGGTGTTCTTCACAAATAGTGGTTCAGAAGCAAATGACTCC CAGGTTAAACTAGTGTGGTATTATAATAATGCACTGGGAAGGCCAGACAAGAAGAAATTT ATTGCTCGCTCAAAATCGTACCATGGATCAACCTTGATTGCAGCTAGTCTATCAGGTCTG CCAGCGCTTCATCAGAAGTTTGATCTACCAGCACCTTTTGTCCTGCACACAGACTGCCCT CACTACTGGCGATTCCGTCTTCCTGATGAGACAGAAGAAGAGTTTTCAACTAGACTTGCC AATAATTTGGAGAATCTTGTCCTCAAAGAAGGACCTGAAACAATTGCTGCTTTCATTGCT GAACCTGTGATGGGCGCTGGTGGTGTTATCCTTCCTCCAAAGACCTATTTTGAGAAGATT CAGGCAGTTCTGAAGAAGTATGACATCTTGTTAATTGCGGATGAGGTCATTACTGCATTT GGAAGACTAGGGACAATGTTTGGATGTGATATGTATAATATTAAACCAGATCTTGTTTCC ATAGCCAAGGCTCTTTCTTCTGCATATATGCCAATTGGAGCAATTCTCGTTAGCCCAGAA ATAACGGATGTAATCTATTCTCAGAGCAATAAACTTGGTTCTTTTGCTCATGGCTTTACA TACTCGGGACATCCTGTTTCTTGTGCCGTTGCTGTAGAAACCTTGAAGATATATAAGGAA AGGAATATTGTAGAACACGTCAACAAAATTGCTCCAAGGTTCCAGGAGGGAATCAAGGCC TTCTCAGGCAGCCCAATTGTTGGGGAGATACGCGGTCTGGGACTGATACTTGGAACTGAA TTTGTCGACAACAAATCTCCAAATGATCCATTTCCAGCTGAATGGGGTGTTGGTTCGATA TTTGGCGCGGAGTGCGAGAAGCGTGGGATGCTCATCAGGGTGGCTGGGGACAGCATCATG CTGTCACCCCCGCTGATCATGACTCCCAATGAAGTCGAAGAAATCATAAGCAAATTCGGC GATGCTCTGAAGGCTACAGAGGAACGGATTGTAGAACTGAAATCCAGGAAGAATTAGCCG ATGCTGCTGGTTGTAACGACAGTGAGGATGGTGATGGCAGTGTCCAATATACAGTGTATT TTCAAACTTTATTTCAGTAAAGTGCTGGGCT