Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049379_T017
CDS Infomation	cds chromosome:B73_RefGen_v4:4:28337007:28395840:1 gene:Zm00001d049379 gene_biotype:protein_coding transcript_biotype:protein_coding description:tetratricopeptide repeat (TPR)-containing protein
Sequence	ATGCATGGGGTAGGCGGCCTGATGCGAGGTGGAGACGGGGCCAAGGATTTCGCGGCGTGG GAGGAGCTAGGCCCGGGCAAGAGAAGGGGAAGAAAGAAAGGAACAAAGAATAAGGGCAGT GCTGAAGTTATTAAAAAGTTGGGTGATGCTACTCTACTTTTCGCTGAAGAAAAATTTAAC GAGGCAATACCTATACTACATGAGATTGTGCGAATTGCACCAAATTTGTCAGATTCATAT TATCTACTTGGTAGCATTTATAGTGAGATTGGTGAACTAGATAAAGCCATAAACTTCTTG ATGCTAGCTGCATATGTTTCCCCAAAGGATGCATCTCTGTGGAAGAAACTTATTCCCTTG GCAAAGAAAAAGGGGGATGCTTCTCTGGCAAGACACTGCATTTTAAAAGCAATGAACGCA GATCCAGAAGATGTAGATCTGAAGTATCTTTGTGGTTATATGTATCACAACCTTTGTGAA TATCAGAAAGCTGCAGAAATATATGAACAAATAGTCAGAATTTATCCTGCCAATAGTGCT GTTCGTAAAGTAGCAGCCCAGATGTACAGAGAGTGTGGTCAAATTGACAATGCTATTAAT TTGTTGAAAGACTATGCCGATACTCAAACTTTCAACATTGACTGGAGCGTTCTAGATTTA TTGATATCACTTTATCTAAGAAATAATGTTTTTAGTGAAGCACTAAAGCAGATCAAGAGG GCACAACTACATTTGGGATCTCAACAGAAACTACCAGTACAATTGCAGGCAAAAGAAGTA ATCTGCCATGCATATTGCGGTGACATGAAACATGCTGAGATTTTCCTTCGTGATGTGCGT TTGGAGCCATCAAAAGAAAACATTGATGTGCTCAAGGAACTCGCAAGCAATTTAGAAAAA ATGGGACGATATGAGTATGCAGTAAAGTTTTACCTGCTAATTGAAAATGTTGCTACTCAA AATGATGGTGGTTTATGCTTTGATCACAAAGAAATGGGTAGTTGGTATGTCAAAGCTGCT CAGTGCTACATGATCTTAGGGGACAAAAAAAATGCTATTCCTTATTTTTATAAAGCGTTA CAAAGCATGAAGGACAATATTGGTATACGATTGACCTTATCCTCCCTTCTTATTGATGAC GACAAGACAGATGAAGCTGCCACTTTGCTTTCTCCTCCCAAAATTCCAGAGTTGCAGTCT GCTAATACTCCAGACCAACAGAAACCTTGGTGGTGTGATGGGAAAGTTAAGATGGCGCTT GCAAAACTTTATTACAATAAAGGAAATTTGGAAGATTTTGTGGACACAATTTTTCATCCT ATTCTAGAAACTTTGAATGTTGAATATGCTAATCGAAAGGTCAAGTCAATGAGAAAGCTT CCAAACATTGTTCTGCATGAAAGAGTCAAAGTATTGGGTGAGCAACGGCCAGATAGTGTA TTTCAAGGATTAAGGCCAATAGCATCACCTGATGAATTGTATGTACAATGTTTGTTCACA CAAAAGGCAAACAGAGCAAAGAAATTAATTGAGAAAAGGACCGCTGCAAATGAAGAGTTA AAACATGATTATCTGCCAAGAACAAAGCAAGTTCCTCCTGTTCCTGGTCTACTGACAAAT GTGGAGCATCATCAGCTTGTGTTAAATCTTTGTCGAACATTAGCTTTGCTGCAGCGATAT TGGGATGCACTGCAGATTATCAACCGAACCCTCAAACTTGGAAATGACGCACTCACTGGT GACAAAAAAGAGGAACTCAGATCCTTGGGTGCTCAAATAGCTTATAGAGCTCCAGATCCC AGTCATGGCTTTAAGTATGTCCGTTACGTTGTTCAGCAGCACCCATATTCTCTTGCCGCA TGGAATTCCTACTATAAGGTGGTATCAAGAATAGAGGACAGGTTTCCACATCATTTCAAA TATCTCCTTCGGACAAGAGAAGCGAATCCTGACTGTGTGCCTCCAATAATCATATCCGGG CATCGATTTACTGCTATAAGTCAGCATCAGTCAGCTGCCCGGGATTACCTTGAAGCTTAT AAGCTGGACCCAGAAAACCCTCTTATTAATCTATGTGTAGGCACTGCCTTGATTAGTTTG GCCCTTGGCTTCAGGCTTCAGAATAAGAACCAGTGCATCGTCCAAGCTTTTGCTTTCCTG TACAGATACCTTCGCCTTTGTGATAACAGTCAGGAAGCCTCGTACAACATTGCTCGAGCG TATCACCACATTGGCCTGAATACCTTGGCAGCTGTTTACTACGACAAGGCTTTGTCAACC GAGGAGAAGGATCATCCCATCCCCAAGCTTCCGTACGAGGCTGGTTCACGTGCGCCAGAG GATCTGAGGCCAGGGTATTGTGATGTGCGAAGAGAGGCAGCGTTCAATCTGCATCTAATC TATATGAAGAGTGGAGCTACCGATCTTGCGAGACGGATCCTAAAAACTTACTGCACTGTC TAA

Peptide Sequence

PEP ID	Zm00001d049379_P017
PEP Infomation	pep chromosome:B73_RefGen_v4:4:28337007:28395840:1 gene:Zm00001d049379 transcript:Zm00001d049379_T017 gene_biotype:protein_coding transcript_biotype:protein_coding description:tetratricopeptide repeat (TPR)-containing protein
Sequence	MHGVGGLMRGGDGAKDFAAWEELGPGKRRGRKKGTKNKGSAEVIKKLGDATLLFAEEKFN EAIPILHEIVRIAPNLSDSYYLLGSIYSEIGELDKAINFLMLAAYVSPKDASLWKKLIPL AKKKGDASLARHCILKAMNADPEDVDLKYLCGYMYHNLCEYQKAAEIYEQIVRIYPANSA VRKVAAQMYRECGQIDNAINLLKDYADTQTFNIDWSVLDLLISLYLRNNVFSEALKQIKR AQLHLGSQQKLPVQLQAKEVICHAYCGDMKHAEIFLRDVRLEPSKENIDVLKELASNLEK MGRYEYAVKFYLLIENVATQNDGGLCFDHKEMGSWYVKAAQCYMILGDKKNAIPYFYKAL QSMKDNIGIRLTLSSLLIDDDKTDEAATLLSPPKIPELQSANTPDQQKPWWCDGKVKMAL AKLYYNKGNLEDFVDTIFHPILETLNVEYANRKVKSMRKLPNIVLHERVKVLGEQRPDSV FQGLRPIASPDELYVQCLFTQKANRAKKLIEKRTAANEELKHDYLPRTKQVPPVPGLLTN VEHHQLVLNLCRTLALLQRYWDALQIINRTLKLGNDALTGDKKEELRSLGAQIAYRAPDP SHGFKYVRYVVQQHPYSLAAWNSYYKVVSRIEDRFPHHFKYLLRTREANPDCVPPIIISG HRFTAISQHQSAARDYLEAYKLDPENPLINLCVGTALISLALGFRLQNKNQCIVQAFAFL YRYLRLCDNSQEASYNIARAYHHIGLNTLAAVYYDKALSTEEKDHPIPKLPYEAGSRAPE DLRPGYCDVRREAAFNLHLIYMKSGATDLARRILKTYCTV

Transcript Sequence

Transcript ID	Zm00001d049379_T017
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:28337007:28395840:1 gene:Zm00001d049379 gene_biotype:protein_coding transcript_biotype:protein_coding description:tetratricopeptide repeat (TPR)-containing protein
Sequence	ATGCATGGGGTAGGCGGCCTGATGCGAGGTGGAGACGGGGCCAAGGATTTCGCGGCGTGG GAGGAGCTAGGCCCGGGCAAGAGAAGGGGAAGAAAGAAAGGAACAAAGAATAAGGGCAGT GCTGAAGTTATTAAAAAGTTGGGTGATGCTACTCTACTTTTCGCTGAAGAAAAATTTAAC GAGGCAATACCTATACTACATGAGATTGTGCGAATTGCACCAAATTTGTCAGATTCATAT TATCTACTTGGTAGCATTTATAGTGAGATTGGTGAACTAGATAAAGCCATAAACTTCTTG ATGCTAGCTGCATATGTTTCCCCAAAGGATGCATCTCTGTGGAAGAAACTTATTCCCTTG GCAAAGAAAAAGGGGGATGCTTCTCTGGCAAGACACTGCATTTTAAAAGCAATGAACGCA GATCCAGAAGATGTAGATCTGAAGTATCTTTGTGGTTATATGTATCACAACCTTTGTGAA TATCAGAAAGCTGCAGAAATATATGAACAAATAGTCAGAATTTATCCTGCCAATAGTGCT GTTCGTAAAGTAGCAGCCCAGATGTACAGAGAGTGTGGTCAAATTGACAATGCTATTAAT TTGTTGAAAGACTATGCCGATACTCAAACTTTCAACATTGACTGGAGCGTTCTAGATTTA TTGATATCACTTTATCTAAGAAATAATGTTTTTAGTGAAGCACTAAAGCAGATCAAGAGG GCACAACTACATTTGGGATCTCAACAGAAACTACCAGTACAATTGCAGGCAAAAGAAGTA ATCTGCCATGCATATTGCGGTGACATGAAACATGCTGAGATTTTCCTTCGTGATGTGCGT TTGGAGCCATCAAAAGAAAACATTGATGTGCTCAAGGAACTCGCAAGCAATTTAGAAAAA ATGGGACGATATGAGTATGCAGTAAAGTTTTACCTGCTAATTGAAAATGTTGCTACTCAA AATGATGGTGGTTTATGCTTTGATCACAAAGAAATGGGTAGTTGGTATGTCAAAGCTGCT CAGTGCTACATGATCTTAGGGGACAAAAAAAATGCTATTCCTTATTTTTATAAAGCGTTA CAAAGCATGAAGGACAATATTGGTATACGATTGACCTTATCCTCCCTTCTTATTGATGAC GACAAGACAGATGAAGCTGCCACTTTGCTTTCTCCTCCCAAAATTCCAGAGTTGCAGTCT GCTAATACTCCAGACCAACAGAAACCTTGGTGGTGTGATGGGAAAGTTAAGATGGCGCTT GCAAAACTTTATTACAATAAAGGAAATTTGGAAGATTTTGTGGACACAATTTTTCATCCT ATTCTAGAAACTTTGAATGTTGAATATGCTAATCGAAAGGTCAAGTCAATGAGAAAGCTT CCAAACATTGTTCTGCATGAAAGAGTCAAAGTATTGGGTGAGCAACGGCCAGATAGTGTA TTTCAAGGATTAAGGCCAATAGCATCACCTGATGAATTGTATGTACAATGTTTGTTCACA CAAAAGGCAAACAGAGCAAAGAAATTAATTGAGAAAAGGACCGCTGCAAATGAAGAGTTA AAACATGATTATCTGCCAAGAACAAAGCAAGTTCCTCCTGTTCCTGGTCTACTGACAAAT GTGGAGCATCATCAGCTTGTGTTAAATCTTTGTCGAACATTAGCTTTGCTGCAGCGATAT TGGGATGCACTGCAGATTATCAACCGAACCCTCAAACTTGGAAATGACGCACTCACTGGT GACAAAAAAGAGGAACTCAGATCCTTGGGTGCTCAAATAGCTTATAGAGCTCCAGATCCC AGTCATGGCTTTAAGTATGTCCGTTACGTTGTTCAGCAGCACCCATATTCTCTTGCCGCA TGGAATTCCTACTATAAGGTGGTATCAAGAATAGAGGACAGGTTTCCACATCATTTCAAA TATCTCCTTCGGACAAGAGAAGCGAATCCTGACTGTGTGCCTCCAATAATCATATCCGGG CATCGATTTACTGCTATAAGTCAGCATCAGTCAGCTGCCCGGGATTACCTTGAAGCTTAT AAGCTGGACCCAGAAAACCCTCTTATTAATCTATGTGTAGGCACTGCCTTGATTAGTTTG GCCCTTGGCTTCAGGCTTCAGAATAAGAACCAGTGCATCGTCCAAGCTTTTGCTTTCCTG TACAGATACCTTCGCCTTTGTGATAACAGTCAGGAAGCCTCGTACAACATTGCTCGAGCG TATCACCACATTGGCCTGAATACCTTGGCAGCTGTTTACTACGACAAGGCTTTGTCAACC GAGGAGAAGGATCATCCCATCCCCAAGCTTCCGTACGAGGCTGGTTCACGTGCGCCAGAG GATCTGAGGCCAGGGTATTGTGATGTGCGAAGAGAGGCAGCGTTCAATCTGCATCTAATC TATATGAAGAGTGGAGCTACCGATCTTGCGAGACGGATCCTAAAAACTTACTGCACTGTC TAAAAGCTGGTATCGGGCAATGTTGTTGGGATCGGATATCAGATCCTTCAAGGCTCCTTG CATTAGCTTAGGATCAAGCTAGTCTATAAAGCTAGAACATTGGTGTAATATGTCACTAGT GACTTTAGATGTGTAGCTGAAGAGTTAACAACGTGCTTGATCCAGATTTAAACGTATATT CTGGTTTCACAATGCTGTGTTATAGTCAAATGGTTCAGCGATGCTTTGCTTCATGTGATT TATTGGCAATTCATTATTATTTTTCTC