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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049365_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:27942239:27945404:-1 gene:Zm00001d049365 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methionine aminopeptidase

Sequence

ATGGCGGCGAGGGTACCGGCGGCCGATCTCAACCAGCACCTCTCCTCGCCGTTCATCGCA
CGGCGCTGCCACGGCCCAGAGGCGCAGCCGGGCTCTGGAGGAGGGAGGAGGAGGGAGCCG
CTGCGGCGCGGGGCCGTCAGCGCGCGCCTCCCGGTGCCGGACCACATACGCCGGCCGCCC
TACGTCGGCACGGCCGCCGTCCCGGAGGTGTGCCCCGACCGGCAGGTGCACGACGGCGAG
AGCATCATGCGGATGCTGGACGCCTGCGAGCTCGCCGCTCGGGTGCTGCACCATGCCGGG
GCGATGGTCAAGCCCTCGGTGACGACGGACGAGATCGACAGGGCTGTGCACCAGATGATC
GTTGACGCCGGCGCCTACCCCTCCCCTCTCGGATACGGCGGGTTCCCCAAGAGCGTGTGC
ACGTCGGTGAACGAGTGCACCTGCCACGGCATCCCCGACTCACGCGAGCTACAGGATGGC
GACATTATCAACATCGACGTTACTGTCTACTTAAACGGATACCATGGGGACACCTCGAGG
ACGTACCTGTGCGGAGAAGTCGACGACGCAACTAAGCAGCTCGTGAAGGTCACTGAAGAG
TGCATGATGCGCGGCATATCAGCCTGCAGGCACGGCGCCAGTTTCAAGGAAATCGGCCAG
AGAATAAGTGAGCACGCGGAGAAGTACGGATACGGCATCGACCCCTTCGTGGGGCACGGC
GTTGGGAGGATGTTCCACTGCGAGCCCATCATATGGCATACCTACGATTACGAGCCCGGG
TTCATGGTCGCAGGCCAGACATTCACCGTAGAGCCGACGCTGTCGATGGGGAGCACGCAG
TGCGTGGTGTGGGACGACGGGTGGACGGCCGTGGCGGCGGACGGCAGCCTCAGCGCGCAG
TTCGAGCACACCGTGCTGGTCACCGGCGACGGCGCGGAGGTCCTGACCGGGTTCCCGTAG

Peptide Sequence

PEP ID

Zm00001d049365_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:27942239:27945404:-1 gene:Zm00001d049365 transcript:Zm00001d049365_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methionine aminopeptidase

Sequence

MAARVPAADLNQHLSSPFIARRCHGPEAQPGSGGGRRREPLRRGAVSARLPVPDHIRRPP
YVGTAAVPEVCPDRQVHDGESIMRMLDACELAARVLHHAGAMVKPSVTTDEIDRAVHQMI
VDAGAYPSPLGYGGFPKSVCTSVNECTCHGIPDSRELQDGDIINIDVTVYLNGYHGDTSR
TYLCGEVDDATKQLVKVTEECMMRGISACRHGASFKEIGQRISEHAEKYGYGIDPFVGHG
VGRMFHCEPIIWHTYDYEPGFMVAGQTFTVEPTLSMGSTQCVVWDDGWTAVAADGSLSAQ
FEHTVLVTGDGAEVLTGFP

Transcript Sequence

Transcript ID

Zm00001d049365_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:27942239:27945404:-1 gene:Zm00001d049365 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methionine aminopeptidase

Sequence

GAAAAAAACTGTCCCTGCCTCTGTACTCGAGTGGGCGCAGTGAATACCCTCTCTCGGTCC
CTCCAACCGCGCTCGTCTTATCCTCAACTCGTCACCCACTTCCCGCCATCTGCCGTCCCT
GCACTGCGCTTATACCCTGCAGGCAACAGCAGCGATGGCGGCGAGGGTACCGGCGGCCGA
TCTCAACCAGCACCTCTCCTCGCCGTTCATCGCACGGCGCTGCCACGGCCCAGAGGCGCA
GCCGGGCTCTGGAGGAGGGAGGAGGAGGGAGCCGCTGCGGCGCGGGGCCGTCAGCGCGCG
CCTCCCGGTGCCGGACCACATACGCCGGCCGCCCTACGTCGGCACGGCCGCCGTCCCGGA
GGTGTGCCCCGACCGGCAGGTGCACGACGGCGAGAGCATCATGCGGATGCTGGACGCCTG
CGAGCTCGCCGCTCGGGTGCTGCACCATGCCGGGGCGATGGTCAAGCCCTCGGTGACGAC
GGACGAGATCGACAGGGCTGTGCACCAGATGATCGTTGACGCCGGCGCCTACCCCTCCCC
TCTCGGATACGGCGGGTTCCCCAAGAGCGTGTGCACGTCGGTGAACGAGTGCACCTGCCA
CGGCATCCCCGACTCACGCGAGCTACAGGATGGCGACATTATCAACATCGACGTTACTGT
CTACTTAAACGGATACCATGGGGACACCTCGAGGACGTACCTGTGCGGAGAAGTCGACGA
CGCAACTAAGCAGCTCGTGAAGGTCACTGAAGAGTGCATGATGCGCGGCATATCAGCCTG
CAGGCACGGCGCCAGTTTCAAGGAAATCGGCCAGAGAATAAGTGAGCACGCGGAGAAGTA
CGGATACGGCATCGACCCCTTCGTGGGGCACGGCGTTGGGAGGATGTTCCACTGCGAGCC
CATCATATGGCATACCTACGATTACGAGCCCGGGTTCATGGTCGCAGGCCAGACATTCAC
CGTAGAGCCGACGCTGTCGATGGGGAGCACGCAGTGCGTGGTGTGGGACGACGGGTGGAC
GGCCGTGGCGGCGGACGGCAGCCTCAGCGCGCAGTTCGAGCACACCGTGCTGGTCACCGG
CGACGGCGCGGAGGTCCTGACCGGGTTCCCGTAGCTGCCTGCACGCATCACGTGAGCGGT
GAGCCTGGGTGGGCCACTGCGTCGGCGAGGGACGGAACTGCAGGAGCAGGCATGCAGCTA
TGCGCACGCTGACAATTTTATTAAAAATCTATGTTGGACGGTTGCCGTA