Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049357_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:27754839:27761380:-1 gene:Zm00001d049357 gene_biotype:protein_coding transcript_biotype:protein_coding description:26S proteasome non-ATPase regulatory subunit 1 homolog B
Sequence	ATGGCTGCTGCTGCGGTGATGGTGAGCTCGGCGGGCTCCCTGCTGGCGATGCTGCAAGAG CCGGCGCCGGAGCTCAAGCTCCACGCGCTGGCCAGCCTCAACTCCCTCGTCCACGCCTTC TGGCACGAGATCTCCACCAGCGTCTCCTCCATTGAGAGTTTGTATGAAGACGAGGAGTTT GTCCAGAGGCAGCTTGCAGCACTAGTTGCTTCTAAGGTGTTTTTCTACTTGGGCGAGCTA AATGATGCTCTGTCATATGCACTTGGCGCTGGACCCCTTTTTGATGTTTCTGACGATTCT GATTACGCTCAAACACTGTTAGCAAAAGCTTTGGATGAATATGCTGCCATCCAATCAAGG GTCACTGGGGAAGAAAAAACGATGGATCCTAGGCTGGAGGCCATTGTGGAAAGGATGCTA GACAAGTGCATTCTTGATGGAAAATATCAACAGGCCATGGGCATGTCTGTTGAGTGTCGG AGACTGGATAAACTGGAGGGAGCAATTTCCCGATGTGATAATCTTCATGGAGCGCTTTCA TATTGCATCAATCTGTCTCACCAATATGTTAGTCACCGCGAATATCGATTGGAGATTCTA CAATGTCTTGTCAAAATATATCAGACATTGCCAAATCCAGATTATTTAAGCATTTGCCAG TGTCTTATGTTCTTGGGTGAACCTGAAAGTGTTGCAAGCATCTTGGACAAGCTGATTTCT GGAAGCAAGGATGATGCTCTCCTTGCATACCAAACTGCTTTCGATCTTGCTGAAAATGAA AATCAGGCTTTTCTCCTGAATGTGCGGGATCACCTTGATGCATTGAGTTCACATACTTCT GCCCATGTGTACCCTGCCAGTGGACCGGCTGTACCAAGTAATCAAACTAATGCTGCTACA GAACCATCCGAAGATGTCCAGATGAGGGAGAACATAACCACGCCAAATGGCAGTGCTGTC ACTGTGGATCCAAATGCATCAACACATGCCGATAGGCTGACAAAAATCAAGGGTATACTG TCAGGAGAGACATCTATTCAGTTGACGCTGCAGTTCCTATACAGCCATAATAGGTCTGAT CTTCAAATTTTGAAGACTATAAAGCAAGCTGTGGAAATGAGGAACAGTGTCTGCCACAGT GCAACAATATGCTCCAATGCAATCATGCATGCAGGGACAACAGTTGATACCTTCCTCAGA GAAAACTTGGAATGGCTAGGTAGGGCAACCAACTGGGCCAAGTTCAGTGCCACTGCTGGA CTAGGCGTCATTCATAGGGGCCATCTTCAACAAGGCCGCGCATTGATGGCCCCCTACCTA CCACAGAATGGTGCTGGTGGCAGTGGTAGCCCATACTCGGAAGGAGGTGCCCTCTATGCT CTTGGTTTGATTCATGCCAACCATGGTGAAGGAATCAAAGAGTTTCTTCGTGAGAGTCTT CGCAACACCACTTCTGAGGTGGTCCAGCATGGTGCTTGTCTGGGACTCGGGCTTGCAGCA TTAGGTACATCAGACGAGGAAATATGCGAGGACATAAAGAACATTCTTTACACGGATAGT GCTGTGGCTGGTGAAGCAGCTGGTATTGGCTTGGGTTTGCTCATGGTTGGCACGGCCAGT GAGAAGGCCACAGAGATGCTTGCCTATGCTCATGATACACAGCATGAGAAAATTATCAGG GGCTTGTCACTTGGAATTGCATTGACGGTGTATGGCAGGGAAGAAGAAGCTGACACCTTG ATCGAGCAAATGACGAGAGACCAAGATCCCATACTTCGTTACGGCGGTATGTATGCATTG GCTCTAGCATACAGAGGGACTGCAAATAACAAAGCCATCCACCAGCTTCTGCATTTTGCT GTGTCGGATGTGAGCGATGATGTGCGAAGGACTGCAGTGTTGGCTCTTGGCTTTGTCCTG TACAATGAGCCTGAACAGACACCCAGAATTGTGTCCCTACTATCAGAATCATACAATCCA CATGTCCGTTACGGGGCAGCCCTGGCCGTCGGAATCTCCTGTGCCGGATCAGGATTAAGC GAAGCCATCTCCCTACTGGAGCCTCTGACATCAGACGTCGTCGACTTCGTGCGCCAGGGT GCTCTCATTGCCATGGCAATGGTGATGATCCAGACCAATGAATCTTACGATCCACGCGTC GGAGCATTCAGGCGCCAGTTGGAAAAGATAATCCTTGACAAGCACGAGGACACCATGAGC AAAATGGGCGCCATACTGGCTTCCGGCATTCTCGACGCCGGCGGCAGGAACGTCGGCATC AGGCTCAAGTCGAGGTCAAAGCATGACAGGCTCACTGCCGTTGTCGGACTAGCTGTTTTC ACCCAGTTCTGGTACTGGTACCCGCTGACCTACTTCATAAGCCTCGCCTTCTCTCCGACG GCCCTCATCGGCCTCAACTCCGACCTGAAAGTGCCGACGTTTGAGTTCCTGTCGAACGCC AAGCCGTCCCTGTTCGATTACCCCAAGCCAGCGACTCAGCAGACTGCAGCCGCATCTGTC AAGGTGCCGGCGGCCATCTTGTCGACATATGCTAAGTCCAAGGCTAGGGCAAAGAAGGAC GCAGAGAGCAAGGCCAAGGAGAAAGCAGATGACTCTTCCAATGCTTCTACTTCGATGCAG GTGGACGGCGCCGCTGCGGAGAAGAAGGCTGCCGAACCCGAGCCTGCGTTCCAGGTTCTG ACGAACCCGGCCCGGGTCGTTCCAGCCCAGGAGAAGTTCGTGAAATTCCTGGAAGGCAGC AGGTACAAGCCGGTGAAGGCTGCCCCCTCGGGATTCGTCCTCCTGCAGGACCTCAAGCCC ACGGAGGCCGAGGAGCTCGCCCTAACTGACGCGCCGTCAACCGCCGCCGCCACGACCAAC GCCCTGGCATCCAGCGCCAGCGAGCCGGCTGCCATGGCTGTCGACGATGAGCCCCAGCCG CCCCCGGCCTTCGAGTACACATCGTAA

Peptide Sequence

PEP ID	Zm00001d049357_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:27754839:27761380:-1 gene:Zm00001d049357 transcript:Zm00001d049357_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:26S proteasome non-ATPase regulatory subunit 1 homolog B
Sequence	MAAAAVMVSSAGSLLAMLQEPAPELKLHALASLNSLVHAFWHEISTSVSSIESLYEDEEF VQRQLAALVASKVFFYLGELNDALSYALGAGPLFDVSDDSDYAQTLLAKALDEYAAIQSR VTGEEKTMDPRLEAIVERMLDKCILDGKYQQAMGMSVECRRLDKLEGAISRCDNLHGALS YCINLSHQYVSHREYRLEILQCLVKIYQTLPNPDYLSICQCLMFLGEPESVASILDKLIS GSKDDALLAYQTAFDLAENENQAFLLNVRDHLDALSSHTSAHVYPASGPAVPSNQTNAAT EPSEDVQMRENITTPNGSAVTVDPNASTHADRLTKIKGILSGETSIQLTLQFLYSHNRSD LQILKTIKQAVEMRNSVCHSATICSNAIMHAGTTVDTFLRENLEWLGRATNWAKFSATAG LGVIHRGHLQQGRALMAPYLPQNGAGGSGSPYSEGGALYALGLIHANHGEGIKEFLRESL RNTTSEVVQHGACLGLGLAALGTSDEEICEDIKNILYTDSAVAGEAAGIGLGLLMVGTAS EKATEMLAYAHDTQHEKIIRGLSLGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYAL ALAYRGTANNKAIHQLLHFAVSDVSDDVRRTAVLALGFVLYNEPEQTPRIVSLLSESYNP HVRYGAALAVGISCAGSGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMIQTNESYDPRV GAFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVGIRLKSRSKHDRLTAVVGLAVF TQFWYWYPLTYFISLAFSPTALIGLNSDLKVPTFEFLSNAKPSLFDYPKPATQQTAAASV KVPAAILSTYAKSKARAKKDAESKAKEKADDSSNASTSMQVDGAAAEKKAAEPEPAFQVL TNPARVVPAQEKFVKFLEGSRYKPVKAAPSGFVLLQDLKPTEAEELALTDAPSTAAATTN ALASSASEPAAMAVDDEPQPPPAFEYTS

Transcript Sequence

Transcript ID	Zm00001d049357_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:27754839:27761380:-1 gene:Zm00001d049357 gene_biotype:protein_coding transcript_biotype:protein_coding description:26S proteasome non-ATPase regulatory subunit 1 homolog B
Sequence	AAGACGTGAACTTTCACCGTCATTTCCCCAACAAATAATCGAATCAGCGATCTTCTGCTC CAAGCAAGGTAGCAGAGCCGCACCCCCGTCCAGACCTTGACGAACGGCGAGCAGCAGCAG GGCGTCGCGTACCCTTCGGAGGCGGATCGTTACTCGTAGGCGGCAGCGGACATGGCTGCT GCTGCGGTGATGGTGAGCTCGGCGGGCTCCCTGCTGGCGATGCTGCAAGAGCCGGCGCCG GAGCTCAAGCTCCACGCGCTGGCCAGCCTCAACTCCCTCGTCCACGCCTTCTGGCACGAG ATCTCCACCAGCGTCTCCTCCATTGAGAGTTTGTATGAAGACGAGGAGTTTGTCCAGAGG CAGCTTGCAGCACTAGTTGCTTCTAAGGTGTTTTTCTACTTGGGCGAGCTAAATGATGCT CTGTCATATGCACTTGGCGCTGGACCCCTTTTTGATGTTTCTGACGATTCTGATTACGCT CAAACACTGTTAGCAAAAGCTTTGGATGAATATGCTGCCATCCAATCAAGGGTCACTGGG GAAGAAAAAACGATGGATCCTAGGCTGGAGGCCATTGTGGAAAGGATGCTAGACAAGTGC ATTCTTGATGGAAAATATCAACAGGCCATGGGCATGTCTGTTGAGTGTCGGAGACTGGAT AAACTGGAGGGAGCAATTTCCCGATGTGATAATCTTCATGGAGCGCTTTCATATTGCATC AATCTGTCTCACCAATATGTTAGTCACCGCGAATATCGATTGGAGATTCTACAATGTCTT GTCAAAATATATCAGACATTGCCAAATCCAGATTATTTAAGCATTTGCCAGTGTCTTATG TTCTTGGGTGAACCTGAAAGTGTTGCAAGCATCTTGGACAAGCTGATTTCTGGAAGCAAG GATGATGCTCTCCTTGCATACCAAACTGCTTTCGATCTTGCTGAAAATGAAAATCAGGCT TTTCTCCTGAATGTGCGGGATCACCTTGATGCATTGAGTTCACATACTTCTGCCCATGTG TACCCTGCCAGTGGACCGGCTGTACCAAGTAATCAAACTAATGCTGCTACAGAACCATCC GAAGATGTCCAGATGAGGGAGAACATAACCACGCCAAATGGCAGTGCTGTCACTGTGGAT CCAAATGCATCAACACATGCCGATAGGCTGACAAAAATCAAGGGTATACTGTCAGGAGAG ACATCTATTCAGTTGACGCTGCAGTTCCTATACAGCCATAATAGGTCTGATCTTCAAATT TTGAAGACTATAAAGCAAGCTGTGGAAATGAGGAACAGTGTCTGCCACAGTGCAACAATA TGCTCCAATGCAATCATGCATGCAGGGACAACAGTTGATACCTTCCTCAGAGAAAACTTG GAATGGCTAGGTAGGGCAACCAACTGGGCCAAGTTCAGTGCCACTGCTGGACTAGGCGTC ATTCATAGGGGCCATCTTCAACAAGGCCGCGCATTGATGGCCCCCTACCTACCACAGAAT GGTGCTGGTGGCAGTGGTAGCCCATACTCGGAAGGAGGTGCCCTCTATGCTCTTGGTTTG ATTCATGCCAACCATGGTGAAGGAATCAAAGAGTTTCTTCGTGAGAGTCTTCGCAACACC ACTTCTGAGGTGGTCCAGCATGGTGCTTGTCTGGGACTCGGGCTTGCAGCATTAGGTACA TCAGACGAGGAAATATGCGAGGACATAAAGAACATTCTTTACACGGATAGTGCTGTGGCT GGTGAAGCAGCTGGTATTGGCTTGGGTTTGCTCATGGTTGGCACGGCCAGTGAGAAGGCC ACAGAGATGCTTGCCTATGCTCATGATACACAGCATGAGAAAATTATCAGGGGCTTGTCA CTTGGAATTGCATTGACGGTGTATGGCAGGGAAGAAGAAGCTGACACCTTGATCGAGCAA ATGACGAGAGACCAAGATCCCATACTTCGTTACGGCGGTATGTATGCATTGGCTCTAGCA TACAGAGGGACTGCAAATAACAAAGCCATCCACCAGCTTCTGCATTTTGCTGTGTCGGAT GTGAGCGATGATGTGCGAAGGACTGCAGTGTTGGCTCTTGGCTTTGTCCTGTACAATGAG CCTGAACAGACACCCAGAATTGTGTCCCTACTATCAGAATCATACAATCCACATGTCCGT TACGGGGCAGCCCTGGCCGTCGGAATCTCCTGTGCCGGATCAGGATTAAGCGAAGCCATC TCCCTACTGGAGCCTCTGACATCAGACGTCGTCGACTTCGTGCGCCAGGGTGCTCTCATT GCCATGGCAATGGTGATGATCCAGACCAATGAATCTTACGATCCACGCGTCGGAGCATTC AGGCGCCAGTTGGAAAAGATAATCCTTGACAAGCACGAGGACACCATGAGCAAAATGGGC GCCATACTGGCTTCCGGCATTCTCGACGCCGGCGGCAGGAACGTCGGCATCAGGCTCAAG TCGAGGTCAAAGCATGACAGGCTCACTGCCGTTGTCGGACTAGCTGTTTTCACCCAGTTC TGGTACTGGTACCCGCTGACCTACTTCATAAGCCTCGCCTTCTCTCCGACGGCCCTCATC GGCCTCAACTCCGACCTGAAAGTGCCGACGTTTGAGTTCCTGTCGAACGCCAAGCCGTCC CTGTTCGATTACCCCAAGCCAGCGACTCAGCAGACTGCAGCCGCATCTGTCAAGGTGCCG GCGGCCATCTTGTCGACATATGCTAAGTCCAAGGCTAGGGCAAAGAAGGACGCAGAGAGC AAGGCCAAGGAGAAAGCAGATGACTCTTCCAATGCTTCTACTTCGATGCAGGTGGACGGC GCCGCTGCGGAGAAGAAGGCTGCCGAACCCGAGCCTGCGTTCCAGGTTCTGACGAACCCG GCCCGGGTCGTTCCAGCCCAGGAGAAGTTCGTGAAATTCCTGGAAGGCAGCAGGTACAAG CCGGTGAAGGCTGCCCCCTCGGGATTCGTCCTCCTGCAGGACCTCAAGCCCACGGAGGCC GAGGAGCTCGCCCTAACTGACGCGCCGTCAACCGCCGCCGCCACGACCAACGCCCTGGCA TCCAGCGCCAGCGAGCCGGCTGCCATGGCTGTCGACGATGAGCCCCAGCCGCCCCCGGCC TTCGAGTACACATCGTAAGGGTGATGGTCCTCGGATCAGGATGCATGGGTTGGCCGGTTG GGTTGTCTGTAGCAACTTCGTGTTGTTGGATGGCGGACTCGGGCGTATCGCTAATTCATT TTTTTAACTCCATATAATACCTTTCCTCAAGCATTTGTCGCGTGAAGAAAATATCTTGCT ACCTGAGTTTTCTGCTGAATTTGCAGCAAATCAGGAAGCCATGTCAAGAATAATAAATTC GAACCTTTGTCCCCATATTGTCCATATATTATGAAAAAAAAAGAGGGAACAAGTTCGAAT CCAATGGACGTCAATAGAGTTTGGGGAAACGAAAGATGGCCAAACCAAAATTTACGAG