Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049346_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:27240538:27245048:-1 gene:Zm00001d049346 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell wall integrity protein scw1
Sequence	ATGGCCGGCGCCGGTATCCACCCGTTCCAGCAGTGGCCACCCACGGCGGCCGCGCCGCCC CCGCCGGGGGCCGCGGCCTCGGTCGCCGTCCCTCCTCCACCCCCCGTCCCCGGCGCGCCT GGCACCGTTGGCCCGGACGAGGTCCGCACTATCTTCATCACGGGGCTCCCTGCAGACGTC AAGGAAAGGGAGCTGCACAACCTGCTGCGCTGGCTCCCGGGATTCGAGGCGTCCCAGATC AACTTCAAGGGCGACCAGCCCATGGGCTTCGCGCTCTTCTCCACCGCGCACCAGGCCATC GCCGCAAAGACTGCGCTCCAGGATATGGTGTTCGATGCTGAGACCAAGGTGGCGCTGCAC ACCGAGATGGCCAAGAAGAACCTCTTCGTTAAGAGATGTGTGGGAATTGATGCAAATGCT GTGGATCAAAGTAAACGGTTGCGAACAGGTGGAGATTATACTCATTCTCCTTATGCTCCT CCATTTCATCCACCTCCACCAGCTGTTTCCATGTGGGGAACCCCAGGTTATATCACAGCG CCACCTCCTTACAATCCATATGCTGCGTATCCAGTCCCCCCTGTAGCGATGACTTCACCT GCTCCTGTTACAGGACCAACTGCCTATGCTCCTGTGCAGAACACAAAGGATAATCCTCCC TGCAATACCCTTTTCATTGGTAATCTCGGTGATACTGTAGTCGAAGAGGAATTGCGAAGT CTCTTCAGTGTGCAACCTGGATTCAAGCAAATGAAAGTGTTACGTCAAGATAGGAACACT GTTTGCTTTATTGAATTTGAGGATGTGAATGCTGCTACATCTGTGCACCAAACTCTGCAG GGTGCTGTTATTCCTAGTTCTGGTCGTGGTGGAATGCGAATTCAATATCCTTTATTTATT CGAAAAAAATGGATTCTTACATTGCATCAGACCTATATCTCAATTTTCAATTTAATACTC TCTTCATAA

Peptide Sequence

PEP ID	Zm00001d049346_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:27240538:27245048:-1 gene:Zm00001d049346 transcript:Zm00001d049346_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell wall integrity protein scw1
Sequence	MAGAGIHPFQQWPPTAAAPPPPGAAASVAVPPPPPVPGAPGTVGPDEVRTIFITGLPADV KERELHNLLRWLPGFEASQINFKGDQPMGFALFSTAHQAIAAKTALQDMVFDAETKVALH TEMAKKNLFVKRCVGIDANAVDQSKRLRTGGDYTHSPYAPPFHPPPPAVSMWGTPGYITA PPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEELRS LFSVQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQYPLFI RKKWILTLHQTYISIFNLILSS

Transcript Sequence

Transcript ID	Zm00001d049346_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:27240538:27245048:-1 gene:Zm00001d049346 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell wall integrity protein scw1
Sequence	ACTCACAATCCAGATCCCGAGATCCATCGTCTCATCATCTCCATCCCCAAATCCGCAATT CGTCGTTCTCTCTATCTCCTCCTTCCGAACCCTCGCCCTCCCAGCCCCCAAACCCCAATC TGTCTCTTCCGCTAGGTTTAGCGTAATTCCATGGCCGGCGCCGGTATCCACCCGTTCCAG CAGTGGCCACCCACGGCGGCCGCGCCGCCCCCGCCGGGGGCCGCGGCCTCGGTCGCCGTC CCTCCTCCACCCCCCGTCCCCGGCGCGCCTGGCACCGTTGGCCCGGACGAGGTCCGCACT ATCTTCATCACGGGGCTCCCTGCAGACGTCAAGGAAAGGGAGCTGCACAACCTGCTGCGC TGGCTCCCGGGATTCGAGGCGTCCCAGATCAACTTCAAGGGCGACCAGCCCATGGGCTTC GCGCTCTTCTCCACCGCGCACCAGGCCATCGCCGCAAAGACTGCGCTCCAGGATATGGTG TTCGATGCTGAGACCAAGGTGGCGCTGCACACCGAGATGGCCAAGAAGAACCTCTTCGTT AAGAGATGTGTGGGAATTGATGCAAATGCTGTGGATCAAAGTAAACGGTTGCGAACAGGT GGAGATTATACTCATTCTCCTTATGCTCCTCCATTTCATCCACCTCCACCAGCTGTTTCC ATGTGGGGAACCCCAGGTTATATCACAGCGCCACCTCCTTACAATCCATATGCTGCGTAT CCAGTCCCCCCTGTAGCGATGACTTCACCTGCTCCTGTTACAGGACCAACTGCCTATGCT CCTGTGCAGAACACAAAGGATAATCCTCCCTGCAATACCCTTTTCATTGGTAATCTCGGT GATACTGTAGTCGAAGAGGAATTGCGAAGTCTCTTCAGTGTGCAACCTGGATTCAAGCAA ATGAAAGTGTTACGTCAAGATAGGAACACTGTTTGCTTTATTGAATTTGAGGATGTGAAT GCTGCTACATCTGTGCACCAAACTCTGCAGGGTGCTGTTATTCCTAGTTCTGGTCGTGGT GGAATGCGAATTCAATATCCTTTATTTATTCGAAAAAAATGGATTCTTACATTGCATCAG ACCTATATCTCAATTTTCAATTTAATACTCTCTTCATAATAACAACACACCCATATACCT ATTACATGCCTACATGTTTTTATATCTTAGATACACACTTCCATCTTGATTCTAATTTGG TTTGTATCAAATTTTGGCACTCCTTAACATCCTGCACATTTTCAAAGAATCCCTTTGGGC GAAGGAAGGATTCAGCTGCTGGCCTTGCGAGCGTTCTAAATGGGGCTCCTGCAAATTGAT TGCAGCCTGAGGGGATGTATCTTGAACTTTAGCATGCCATCATGGATTTCATACTACCAC ATCTTATTTATGATCTGCATACTTCTGCTGAATGCACGCTCTCTCACGTGGCATCATCAT CTTCATTTGGTGGAGTATCTGGGACATGATCATCATCTATCATCTTTATTAGGTGGAGTT TCAGGGGCATGATCATCATCTGGCTGACATTGCATTGTCACCAAAACATGCTGGTGTTAC TTTTTTTTACATTATCTTTGTAGCTTGTGAAGGCCATCCTAGTCTTCTAGATGTGCATTT GGCGTTTGTCATGAACATTACACTTTGTAGTATTCGTATTATGTATTTCCCTTTGTGCAG TTGCAACGTTGTGTTTTCATTATAATAGTTGATGTGGTTTCGCTGGTTTACTAACAATTC TGAAATCTTGGATGATTCATTCCATCATGTCATGGCATTTTGACGAGGAAATTTTGTAGA CATGGCATGGCAATATGGCATACTTCATTCCATGCATGCTGGAGCATTGCCATCATCCCC ACGAAGCATGTAATCACAACGTTGATTGGTTTGTTCTTAAATGTTTTCATCCAGGCTGAG AGGCTAACAGGGATAGTAAAATTGCAAAAAAGTCGCAAGCTGTTTCATTCTTTTACTACA GTGGTGGAACACCGAAGCGTTGCTACGGTCCCTTTTGGAAAGCCTTCTTGTTCTTTTCTT ACAGTGGAACGCCTTGGTTCTTTTGCTGCAGTGGAACACCTTCATTCTTTTGCTGCAGGT GAATGCCAAGGCGTGGCTATGTACTTTTTGGTTAGAGAACCTTAGTGATGCTAAAATATA AGCTAACTGAAGCTTAGTGATGTTGATGAGATGTAAGGAACTTATGGATCTGCTGAGGTG GTTTCTAGCTTGACTAGGCAACCCTTTCGGTTTTTATCCTGCCTTGTAATACCAAGGCAT GGTTGTGGCCCTTTTGTTTAGAGAACCTTAGTGATGCTGGTATGTAAGCCAACTTAATCT TAGTGATGTTGATGAGATAAACAATGGATCCGATGAGGTGGTTT