Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049286_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:24421063:24426546:-1 gene:Zm00001d049286 gene_biotype:protein_coding transcript_biotype:protein_coding description:LRR receptor-like serine/threonine-protein kinase EFR
Sequence	ATGGCGGCGGCGCAAGCGCAACCGGCTGCGCCGCACGCACTGCATCTGCTGCTGTCGCTT ACCATGTTCCTGCTAACGGCAGGCGCGCAGCGGTCCGACTCCGACTCCGACATCGAGCGG GACGCGCTGCGGGCGTTCAGGGCCAGCGTGTCGGACGCGTCGTTGTCCGGTGCGCTGCAG TCGTGGAACGGCACGTTGCACTTCTGCCAGTGGCCCGGCGTGGCGTGCACGGACGACGGG CACGTCACGTCGCTGAACGTCTCCGGCCTGGGGCTCACCGGCACGGTCTCCGCGGCCGTC GGCAACCTCACGTACCTCGAGTACCTCGTCCTCGAGAAGAACCAGCTCTCCGGGCGCATC CCAGCGAGCATCGGCGGGCTGCGGCGCCTGCGGTACCTCAGCCTCTGCGACAACGGCGGC ATCAGCGGAGAGATCCCGGACAGCCTCCGCGGCTGCACCGGCCTCCAATTCCTGTACCTC AACAACAACAGCCTCACCGGCGCCATCCCCGCGTGGCTCGGCGCGCTCCCCAACCTCACC TACCTGTACCTGCACCAGAACGCGCTGTCCGGCGAGATCCCGCCGTCGCTCGGCAGCCTC ACGGGGCTGCAGGCCCTCAGGCTCGACGAGAACTGCCTGCGAGGCAGCCTGCCCGCTGGC CTCGCGGAACTTCCATCCCTCCAGACGTTCAGCGCGTACCAGAACCTGCTGGAAGGGGAG ATCCCGCCAGGCTTCTTCAACATGTCGTCGCTCCAGTTTCTTGTCCTCACCAACAACGCG TTCCGTGGCGTCCTCCCGCCCTACGCCGGCGCGCGCATGGCCAATCTCAGATCCCTGTAC CTCGGCGGCAACAGCCTGACGGGCCCCATCCCCGCGGCGCTTGGCAAGGCCTCCAGTCTG ACGTCTATCGTCCTAGCAAACAACAGCTTCACTGGGCAGGTGCCTCCCGAGATCGGCATG CTCTGCCCACAGTGGCTGTACATGTCGGGCAACCAGCTGACGGCGAGCGACGAGCAAGGC TGGGAGTTCCTGGACCATCTTACCAACTGCGGCAGCCTGCAGGTCCTCGCCCTTGACGAC AACAAGCTCGGTGGCCAGTTGCCAGGCTCCATTGCCCGCCTCCCGAGGGAGATTCAAGCA CTGAACCTAGGGAAAAACCGCATCTCCGGGTCAATCCCACCGGCCATCGGCGACCTCATC GGGCTCACAACGTTGGGCCTCGAATCCAACCTCCTCAACGGCACCATCCCAGCAGGGATT GGGAACATGAAGAACCTCACGAAGTTGGCGTTGCAGGGGAACCGGTTGACGGGGCCAATC CCATCCTCCATCGGCGACCTCACCCAGCTACTGGAGCTTGATCTGAGCAGTAACGCGCTG AGTGGGTTCATCCCCGACACTCTAGCCAACCTGAACCACCTAACCTCGCTCAACCTCTCG GGCAACGCCCTCACCGGCCAAGTCCCAAGGGAAATCTTCTCCCTGCCGTCCTTGTCGTCC GCCATGGACTTGTCTCACAACCAGCTAGACGGCCCTCTTCCCTCCGACGTCTCCAGCCTC ACCAACCTTGCTCAGCTAGCGCTATCCGGGAACAAATTCTCCGGTCAGCTACCAGAAGAG CTGGAGCAGTGCCAGAGCCTAGAGTTTCTTGATCTGGATTTCAATTCCTTCCATGGAAGC ATCCCTCCGTCGCTGAGCAAGCTCAAGGGTCTCAGGAGACTCGGCCTGGCGAGCAACGGG TTGTCCGGGAGCATCCCACCGGAGCTCGGCAACATGTCTGGCCTGCAGGAGCTGTACCTG TCTAGAAACGACCTGACAGGAGCCGTCCCGGAGGAACTGGAGGACCTGAGCTCCCTGGTC GAGCTGGACTTGTCCTACAACCATCTCGACGGCAGCGTGCCCCTGCGCGGCATATTCGCC AACACTTCCGGGCTCAAGATCGCAGGGAACGCGGGACTCTGCGGTGGCGTCCCGGAGCTC GACCTGCCCCGGTGTCCAGCTTCCAGGGACACACGATGGCTTCTCCACATAGTGGTGCCT GTCCTAAGCATCGCTCTCTTCTCGGCCATACTCCTCAGCATGTTCCAGTGGTACAGCAAA GTGGCCGGACAAACAGATAAAAAACCTGATGACGCAACGCCGCCGGCGGATGACGTCCTC GGCGGCATGATGAACTATCAGAGAATATCGTACGCCGGGCTGGACAGAGCTACAAACGGC TTCGCGGACACCAACCTGATCGGCGTAGGCAAGTTCGGGTCCGTGTACCTGGGTGCCCTG CCCCTGGTGCCCAAGGGCGCTCCGGACTCGGCGCCCGAGAAGGTCGCCGTGGCCGTCAAG GTGTTCGATCTCTGCCAGGTCGGTGCCTCCAAGACGTTCGTGTCGGAGTGCGAGGCGCTA CGGAACGTCCGGCACCGGAACCTCGTCAGGATACTCACCTGCTGCGTCGGCGCGGACGCG AGGGGCGACGACTTCAGAGCGCTGGTGTTCGAGTTCATGCCCAACTACAGCCTGGACAGG TGGCTGGGCGTCAACCCCAGGTCTGAAGAGCCGAGGATCGTGAAGAGCCTGAGCGTGATC CAGAGGCTCAACATCGCCGTCGACATCGCCGACGCGCTCTGCTACCTCCACACCAGCTCC GTACCGCCGATCGTCCACTGCGACGTCAAGCCCAGCAACGTTCTCCTCGGCGAGGACATG AGGGCGGTGGTGGGCGACTTGGGCCTTGCGAAGCTGCTACATGAGTCCGGGAGCCATGAC ACTTGCAACGACACAAGCACAGTTGGCTTGAGAGGCACGGTTGGGTATATCCCGCCAGAG TACGGCACGACAGGGAAGGTGTCCACGCACGGCGACGTCTACAGCTTTGGGATCACGCTG CTGGAGATTTTCACCGGGAGGTCACCGACGGACGACGCGTTCAAGGACGGGCTGACGCTA ATGGAGTTCGTGGCCGCGTCGTTCCCAGACAAGATCGAGCAAGTCCTCGACCGGGCCCTG CTGCCGGTCGTCCAAGGCATCGATGGCCAGGTGCCCTGCGGCTCCGACGGCGGCGGCGCG CATGTCTCGGAACGCGGCTGCCTTGTCTCCGCTGTGAGAGTCGCGCTCAGCTGCGCGCGT GCAGTGCCGCTCGAGAGGATCAGCATGGCGGATGCGGCCACCGAGTTGCGCTCCATCAGG GACGCTTGTTGTGCCCATTCGACTGGACAATAA

Peptide Sequence

PEP ID	Zm00001d049286_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:24421063:24426546:-1 gene:Zm00001d049286 transcript:Zm00001d049286_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:LRR receptor-like serine/threonine-protein kinase EFR
Sequence	MAAAQAQPAAPHALHLLLSLTMFLLTAGAQRSDSDSDIERDALRAFRASVSDASLSGALQ SWNGTLHFCQWPGVACTDDGHVTSLNVSGLGLTGTVSAAVGNLTYLEYLVLEKNQLSGRI PASIGGLRRLRYLSLCDNGGISGEIPDSLRGCTGLQFLYLNNNSLTGAIPAWLGALPNLT YLYLHQNALSGEIPPSLGSLTGLQALRLDENCLRGSLPAGLAELPSLQTFSAYQNLLEGE IPPGFFNMSSLQFLVLTNNAFRGVLPPYAGARMANLRSLYLGGNSLTGPIPAALGKASSL TSIVLANNSFTGQVPPEIGMLCPQWLYMSGNQLTASDEQGWEFLDHLTNCGSLQVLALDD NKLGGQLPGSIARLPREIQALNLGKNRISGSIPPAIGDLIGLTTLGLESNLLNGTIPAGI GNMKNLTKLALQGNRLTGPIPSSIGDLTQLLELDLSSNALSGFIPDTLANLNHLTSLNLS GNALTGQVPREIFSLPSLSSAMDLSHNQLDGPLPSDVSSLTNLAQLALSGNKFSGQLPEE LEQCQSLEFLDLDFNSFHGSIPPSLSKLKGLRRLGLASNGLSGSIPPELGNMSGLQELYL SRNDLTGAVPEELEDLSSLVELDLSYNHLDGSVPLRGIFANTSGLKIAGNAGLCGGVPEL DLPRCPASRDTRWLLHIVVPVLSIALFSAILLSMFQWYSKVAGQTDKKPDDATPPADDVL GGMMNYQRISYAGLDRATNGFADTNLIGVGKFGSVYLGALPLVPKGAPDSAPEKVAVAVK VFDLCQVGASKTFVSECEALRNVRHRNLVRILTCCVGADARGDDFRALVFEFMPNYSLDR WLGVNPRSEEPRIVKSLSVIQRLNIAVDIADALCYLHTSSVPPIVHCDVKPSNVLLGEDM RAVVGDLGLAKLLHESGSHDTCNDTSTVGLRGTVGYIPPEYGTTGKVSTHGDVYSFGITL LEIFTGRSPTDDAFKDGLTLMEFVAASFPDKIEQVLDRALLPVVQGIDGQVPCGSDGGGA HVSERGCLVSAVRVALSCARAVPLERISMADAATELRSIRDACCAHSTGQ

Transcript Sequence

Transcript ID	Zm00001d049286_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:24421063:24426546:-1 gene:Zm00001d049286 gene_biotype:protein_coding transcript_biotype:protein_coding description:LRR receptor-like serine/threonine-protein kinase EFR
Sequence	ACACACGAAAAGGGAGAAACCACGCAGTCTCACACAAGGCCGTGACGAGCATGGCGGCGG CGCAAGCGCAACCGGCTGCGCCGCACGCACTGCATCTGCTGCTGTCGCTTACCATGTTCC TGCTAACGGCAGGCGCGCAGCGGTCCGACTCCGACTCCGACATCGAGCGGGACGCGCTGC GGGCGTTCAGGGCCAGCGTGTCGGACGCGTCGTTGTCCGGTGCGCTGCAGTCGTGGAACG GCACGTTGCACTTCTGCCAGTGGCCCGGCGTGGCGTGCACGGACGACGGGCACGTCACGT CGCTGAACGTCTCCGGCCTGGGGCTCACCGGCACGGTCTCCGCGGCCGTCGGCAACCTCA CGTACCTCGAGTACCTCGTCCTCGAGAAGAACCAGCTCTCCGGGCGCATCCCAGCGAGCA TCGGCGGGCTGCGGCGCCTGCGGTACCTCAGCCTCTGCGACAACGGCGGCATCAGCGGAG AGATCCCGGACAGCCTCCGCGGCTGCACCGGCCTCCAATTCCTGTACCTCAACAACAACA GCCTCACCGGCGCCATCCCCGCGTGGCTCGGCGCGCTCCCCAACCTCACCTACCTGTACC TGCACCAGAACGCGCTGTCCGGCGAGATCCCGCCGTCGCTCGGCAGCCTCACGGGGCTGC AGGCCCTCAGGCTCGACGAGAACTGCCTGCGAGGCAGCCTGCCCGCTGGCCTCGCGGAAC TTCCATCCCTCCAGACGTTCAGCGCGTACCAGAACCTGCTGGAAGGGGAGATCCCGCCAG GCTTCTTCAACATGTCGTCGCTCCAGTTTCTTGTCCTCACCAACAACGCGTTCCGTGGCG TCCTCCCGCCCTACGCCGGCGCGCGCATGGCCAATCTCAGATCCCTGTACCTCGGCGGCA ACAGCCTGACGGGCCCCATCCCCGCGGCGCTTGGCAAGGCCTCCAGTCTGACGTCTATCG TCCTAGCAAACAACAGCTTCACTGGGCAGGTGCCTCCCGAGATCGGCATGCTCTGCCCAC AGTGGCTGTACATGTCGGGCAACCAGCTGACGGCGAGCGACGAGCAAGGCTGGGAGTTCC TGGACCATCTTACCAACTGCGGCAGCCTGCAGGTCCTCGCCCTTGACGACAACAAGCTCG GTGGCCAGTTGCCAGGCTCCATTGCCCGCCTCCCGAGGGAGATTCAAGCACTGAACCTAG GGAAAAACCGCATCTCCGGGTCAATCCCACCGGCCATCGGCGACCTCATCGGGCTCACAA CGTTGGGCCTCGAATCCAACCTCCTCAACGGCACCATCCCAGCAGGGATTGGGAACATGA AGAACCTCACGAAGTTGGCGTTGCAGGGGAACCGGTTGACGGGGCCAATCCCATCCTCCA TCGGCGACCTCACCCAGCTACTGGAGCTTGATCTGAGCAGTAACGCGCTGAGTGGGTTCA TCCCCGACACTCTAGCCAACCTGAACCACCTAACCTCGCTCAACCTCTCGGGCAACGCCC TCACCGGCCAAGTCCCAAGGGAAATCTTCTCCCTGCCGTCCTTGTCGTCCGCCATGGACT TGTCTCACAACCAGCTAGACGGCCCTCTTCCCTCCGACGTCTCCAGCCTCACCAACCTTG CTCAGCTAGCGCTATCCGGGAACAAATTCTCCGGTCAGCTACCAGAAGAGCTGGAGCAGT GCCAGAGCCTAGAGTTTCTTGATCTGGATTTCAATTCCTTCCATGGAAGCATCCCTCCGT CGCTGAGCAAGCTCAAGGGTCTCAGGAGACTCGGCCTGGCGAGCAACGGGTTGTCCGGGA GCATCCCACCGGAGCTCGGCAACATGTCTGGCCTGCAGGAGCTGTACCTGTCTAGAAACG ACCTGACAGGAGCCGTCCCGGAGGAACTGGAGGACCTGAGCTCCCTGGTCGAGCTGGACT TGTCCTACAACCATCTCGACGGCAGCGTGCCCCTGCGCGGCATATTCGCCAACACTTCCG GGCTCAAGATCGCAGGGAACGCGGGACTCTGCGGTGGCGTCCCGGAGCTCGACCTGCCCC GGTGTCCAGCTTCCAGGGACACACGATGGCTTCTCCACATAGTGGTGCCTGTCCTAAGCA TCGCTCTCTTCTCGGCCATACTCCTCAGCATGTTCCAGTGGTACAGCAAAGTGGCCGGAC AAACAGATAAAAAACCTGATGACGCAACGCCGCCGGCGGATGACGTCCTCGGCGGCATGA TGAACTATCAGAGAATATCGTACGCCGGGCTGGACAGAGCTACAAACGGCTTCGCGGACA CCAACCTGATCGGCGTAGGCAAGTTCGGGTCCGTGTACCTGGGTGCCCTGCCCCTGGTGC CCAAGGGCGCTCCGGACTCGGCGCCCGAGAAGGTCGCCGTGGCCGTCAAGGTGTTCGATC TCTGCCAGGTCGGTGCCTCCAAGACGTTCGTGTCGGAGTGCGAGGCGCTACGGAACGTCC GGCACCGGAACCTCGTCAGGATACTCACCTGCTGCGTCGGCGCGGACGCGAGGGGCGACG ACTTCAGAGCGCTGGTGTTCGAGTTCATGCCCAACTACAGCCTGGACAGGTGGCTGGGCG TCAACCCCAGGTCTGAAGAGCCGAGGATCGTGAAGAGCCTGAGCGTGATCCAGAGGCTCA ACATCGCCGTCGACATCGCCGACGCGCTCTGCTACCTCCACACCAGCTCCGTACCGCCGA TCGTCCACTGCGACGTCAAGCCCAGCAACGTTCTCCTCGGCGAGGACATGAGGGCGGTGG TGGGCGACTTGGGCCTTGCGAAGCTGCTACATGAGTCCGGGAGCCATGACACTTGCAACG ACACAAGCACAGTTGGCTTGAGAGGCACGGTTGGGTATATCCCGCCAGAGTACGGCACGA CAGGGAAGGTGTCCACGCACGGCGACGTCTACAGCTTTGGGATCACGCTGCTGGAGATTT TCACCGGGAGGTCACCGACGGACGACGCGTTCAAGGACGGGCTGACGCTAATGGAGTTCG TGGCCGCGTCGTTCCCAGACAAGATCGAGCAAGTCCTCGACCGGGCCCTGCTGCCGGTCG TCCAAGGCATCGATGGCCAGGTGCCCTGCGGCTCCGACGGCGGCGGCGCGCATGTCTCGG AACGCGGCTGCCTTGTCTCCGCTGTGAGAGTCGCGCTCAGCTGCGCGCGTGCAGTGCCGC TCGAGAGGATCAGCATGGCGGATGCGGCCACCGAGTTGCGCTCCATCAGGGACGCTTGTT GTGCCCATTCGACTGGACAATAAGCTCCGTACGTGATCTTCGGGTATTACATTCTGTAAA CGCATCGGCAGCTGGTGTATAAATAGGTGGCTAAGTTTGCGCACAGAAACAACATAGAAC AAATGGAGACCTTGAAGATGGTGAAGAACATCGCGCTGTTGCTGCTGCTGTTCAGCAATT CTAACCCAGGAAATGCAGCAGGTGCCTGCAGCCTCTCAGACCTCGCCGTGACGCAGGCCG CGGTGCCCTCGAAGGCGAACGTCTATGCGGTGACGGTGGAGAACCGGTGCATCTGCACGC AGGCGAACGTCAAGCTGGCGTGTGACGGGTTCAGCTCCTCCGTGGCCGTCGACCCAGGCG TGCTCAGCGTGGACGGCAAGCTCTGCACCCTCAACGGCGGGCGCCCCATCGGCATGGGCC CGGAGTACGCCGTCAAGTTCTCCTACGCCTCGCCGTCCCAGTTCGCCTTCAAGCCCGTGT CGTCTTCCATCGCCTGCTCCTGATTAACTCGTCGAGGCCGGCCTTAGCTGTTCGCTCTGC CATACTCACATTCTTTTCCACGGCGATTCGATGTTTCGAACAATATATTGAGGGTGAATA ATTCATCGGGAGTGACATTTTTG