Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049273_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:23998240:24004490:1 gene:Zm00001d049273 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coiled-coil domain-containing protein SCD2
Sequence	ATGGATGCGCCCCGCGGCGGCCACGCGCGGCGGCCGGGCCCCTCCGGCGAGGCGGCGAAC CAGCGCCGCGCGGCCGCGGCTCAAGCGATGGCGCGCATGGAGGAGATGATGCTCGCGCAC GCAGGCGCCGCCGGCGAGTTCAGCATCATCCTCGACGCCCCTCTGCCTTCGCTGCAGCAG TACCGCCGCCACCCCACGCCGCCGTCGGGGGCCCCCTCGGCCTCGTCCGCCAACTCCTCC CCGTTCCGACGCGGCGGCGGCGGAGGGCGGGACGAGGGAGTCCCCGCGCGCTTGCGCCGC GACGGGAGCGGCCACGACGCCCTCGGCGACCCGGTCACCGCCGCGCGCGCCTCTCGCCAC GGCGCGGCCGATGGAACGGGCGCAGGCGCCGCACGGCCGCGAGCGGGTGGCGCGCGCCGC GAGCGCGAGCAGGAGAAGCCCGTAGAGGCGCCGGTGCGGCTGACGGACCCGCGGAGCGTG CGGAGGCCTGTCTCTCGCGGCGAGACGCCTCCCCCGACGGCCGCCGAGGTGAGACGCGTG GCGGATCAGGAGGAGGAAGAAGAGACGCCTCTTAAGCTGCTGGCGCGCGGCGGGCGGAGC TCAAGCGCGGCTAGGCCTGCAGAAGCCTCGCAAGCGTCAGAGACGGTCCCTACGGCCGCA AGGCCGTCGAGCCGGCGGTCGAGGCGGGACGTCGGCGCGAAGCAAGGTTTGTCTGAGGTA ACGTCGAACGTGGACTCCGACGTGGAGAGTGTCGGGCGCCGGAGCAGCCGAGGGAGCGAG GACGGTGGGGATGAGCGGGTGTCGTTGCCCATGCCACTGGCAGCCGTCGTCGCCAGAGAC CGGAGCAGGAGCAATTCGCCCGCGATAAGTCGGAATGGTGTGGACTCAGCTGCAGCGAAT CGCACTCCATCAACAGGAAGGTCAACCTTTGCACCTCCAGTTGGCGTTAGTGTGAGGCCT CTACAAGCTGTGGAAATTCCCAATGGGACACCTAGGGATAGAAGGGCTGTTTATCCCGAT CCTACTTTCGCCCAGTCCACACGGTCACGGGACTCACATGACAGTTCAACACTGACAGAA GAGCTTGAAATGCTAAAAGATGAGAATGTAAATCTTCTGGAGAAGCTTGGGCTAGCAGAA GAGAAACTTAGACAATCTGAAGCCCGGACAACAGAGCTCGAGAAACAGGTTGCTAATCTT GGCAATGGGTTATCTATGGAAGTAAAGCTTATGAAAAGGAGGGAGGAAATGCTTGTAAGA AAGGAGCAAGAGATAAGAAAAGCTCTTATATCCAAGAATGGTAAAAGCGAGGAACTCACC ACTCTTCAGCAACAGCTACAGTCTGCAAGAGAAGAAGCATCGGCTGCTGTGAAGAAACTC AAAGAAGCTGAATCCGAAACACAAGAGTTACATACAATGACACGCAGGATGATCTTAAGC AAAGAAGAAATGGAAGAGGTTGTCATGAAGAGGTGTTGGTTAGCCCGTTATTGGGGTTTG GCTGTCCAATATGGCATCTATCCAGACATCTCAATGTCAAAACATGAATACTGGTCTTCA CTTGCACCTCTTCCATTTGAGTATGTAACATCTGCTGGACAGAGAGCCAAGGATGGATCC GAAGCAGAAGGTAATGGTTTGGAAGACGTGGACAAGCTTGTTCATGATTTGACTGTTACA GCAGGGGAAGGCAACGTAGAAACCATGCTTGCTGTTGATAAAGGACTTCAAGAACTAGCT TTCCTGAAGGTGGAGGATGCGGTACTTTTTGCCCTTGCCCAACACCATCGTACTAATGTT GCTGGAGCAGCTGATCCAGATATTAAATCATCTGGGGATGAAAAATTCACTGAGGCATTT GACCTAAGCAAGGAGGAGGAAGAAGATGTACAGTTCAAGCAGGCTTGGCTCATATTTTTC TGGAGGAGGGCTAAGACCAACAACGTGGAAGAAGATATTGCCGAGGAGCGATTGCACATG TGGATCGATCGACACGGCCAGCAACCAACGTCACATGACGCTGTGGATGTTGAGCAAGGC ATACACGAGCTGAGGAAGCTTGGCATCGAGCAGCTCCTGTGGGAGCTCTCCCGCCACGAG GCGAACCTTGCCAAAGACAGTCCATCTGATGTCGAGGACCTGACCTAA

Peptide Sequence

PEP ID	Zm00001d049273_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:23998240:24004490:1 gene:Zm00001d049273 transcript:Zm00001d049273_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coiled-coil domain-containing protein SCD2
Sequence	MDAPRGGHARRPGPSGEAANQRRAAAAQAMARMEEMMLAHAGAAGEFSIILDAPLPSLQQ YRRHPTPPSGAPSASSANSSPFRRGGGGGRDEGVPARLRRDGSGHDALGDPVTAARASRH GAADGTGAGAARPRAGGARREREQEKPVEAPVRLTDPRSVRRPVSRGETPPPTAAEVRRV ADQEEEEETPLKLLARGGRSSSAARPAEASQASETVPTAARPSSRRSRRDVGAKQGLSEV TSNVDSDVESVGRRSSRGSEDGGDERVSLPMPLAAVVARDRSRSNSPAISRNGVDSAAAN RTPSTGRSTFAPPVGVSVRPLQAVEIPNGTPRDRRAVYPDPTFAQSTRSRDSHDSSTLTE ELEMLKDENVNLLEKLGLAEEKLRQSEARTTELEKQVANLGNGLSMEVKLMKRREEMLVR KEQEIRKALISKNGKSEELTTLQQQLQSAREEASAAVKKLKEAESETQELHTMTRRMILS KEEMEEVVMKRCWLARYWGLAVQYGIYPDISMSKHEYWSSLAPLPFEYVTSAGQRAKDGS EAEGNGLEDVDKLVHDLTVTAGEGNVETMLAVDKGLQELAFLKVEDAVLFALAQHHRTNV AGAADPDIKSSGDEKFTEAFDLSKEEEEDVQFKQAWLIFFWRRAKTNNVEEDIAEERLHM WIDRHGQQPTSHDAVDVEQGIHELRKLGIEQLLWELSRHEANLAKDSPSDVEDLT

Transcript Sequence

Transcript ID	Zm00001d049273_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:23998240:24004490:1 gene:Zm00001d049273 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coiled-coil domain-containing protein SCD2
Sequence	CCCCAATCCCGCGGCTTCTCTTTCTCTTCGTAGTTCGAAACCAAAACGAAGAACAAGGCG TAACGCAAAAGTCAAACTAAAGTCAACGCGGCGGCGGTTAGGCGCCCACCCACCCACCCC AAAGCCCGATGGATGCGCCCCGCGGCGGCCACGCGCGGCGGCCGGGCCCCTCCGGCGAGG CGGCGAACCAGCGCCGCGCGGCCGCGGCTCAAGCGATGGCGCGCATGGAGGAGATGATGC TCGCGCACGCAGGCGCCGCCGGCGAGTTCAGCATCATCCTCGACGCCCCTCTGCCTTCGC TGCAGCAGTACCGCCGCCACCCCACGCCGCCGTCGGGGGCCCCCTCGGCCTCGTCCGCCA ACTCCTCCCCGTTCCGACGCGGCGGCGGCGGAGGGCGGGACGAGGGAGTCCCCGCGCGCT TGCGCCGCGACGGGAGCGGCCACGACGCCCTCGGCGACCCGGTCACCGCCGCGCGCGCCT CTCGCCACGGCGCGGCCGATGGAACGGGCGCAGGCGCCGCACGGCCGCGAGCGGGTGGCG CGCGCCGCGAGCGCGAGCAGGAGAAGCCCGTAGAGGCGCCGGTGCGGCTGACGGACCCGC GGAGCGTGCGGAGGCCTGTCTCTCGCGGCGAGACGCCTCCCCCGACGGCCGCCGAGGTGA GACGCGTGGCGGATCAGGAGGAGGAAGAAGAGACGCCTCTTAAGCTGCTGGCGCGCGGCG GGCGGAGCTCAAGCGCGGCTAGGCCTGCAGAAGCCTCGCAAGCGTCAGAGACGGTCCCTA CGGCCGCAAGGCCGTCGAGCCGGCGGTCGAGGCGGGACGTCGGCGCGAAGCAAGGTTTGT CTGAGGTAACGTCGAACGTGGACTCCGACGTGGAGAGTGTCGGGCGCCGGAGCAGCCGAG GGAGCGAGGACGGTGGGGATGAGCGGGTGTCGTTGCCCATGCCACTGGCAGCCGTCGTCG CCAGAGACCGGAGCAGGAGCAATTCGCCCGCGATAAGTCGGAATGGTGTGGACTCAGCTG CAGCGAATCGCACTCCATCAACAGGAAGGTCAACCTTTGCACCTCCAGTTGGCGTTAGTG TGAGGCCTCTACAAGCTGTGGAAATTCCCAATGGGACACCTAGGGATAGAAGGGCTGTTT ATCCCGATCCTACTTTCGCCCAGTCCACACGGTCACGGGACTCACATGACAGTTCAACAC TGACAGAAGAGCTTGAAATGCTAAAAGATGAGAATGTAAATCTTCTGGAGAAGCTTGGGC TAGCAGAAGAGAAACTTAGACAATCTGAAGCCCGGACAACAGAGCTCGAGAAACAGGTTG CTAATCTTGGCAATGGGTTATCTATGGAAGTAAAGCTTATGAAAAGGAGGGAGGAAATGC TTGTAAGAAAGGAGCAAGAGATAAGAAAAGCTCTTATATCCAAGAATGGTAAAAGCGAGG AACTCACCACTCTTCAGCAACAGCTACAGTCTGCAAGAGAAGAAGCATCGGCTGCTGTGA AGAAACTCAAAGAAGCTGAATCCGAAACACAAGAGTTACATACAATGACACGCAGGATGA TCTTAAGCAAAGAAGAAATGGAAGAGGTTGTCATGAAGAGGTGTTGGTTAGCCCGTTATT GGGGTTTGGCTGTCCAATATGGCATCTATCCAGACATCTCAATGTCAAAACATGAATACT GGTCTTCACTTGCACCTCTTCCATTTGAGTATGTAACATCTGCTGGACAGAGAGCCAAGG ATGGATCCGAAGCAGAAGGTAATGGTTTGGAAGACGTGGACAAGCTTGTTCATGATTTGA CTGTTACAGCAGGGGAAGGCAACGTAGAAACCATGCTTGCTGTTGATAAAGGACTTCAAG AACTAGCTTTCCTGAAGGTGGAGGATGCGGTACTTTTTGCCCTTGCCCAACACCATCGTA CTAATGTTGCTGGAGCAGCTGATCCAGATATTAAATCATCTGGGGATGAAAAATTCACTG AGGCATTTGACCTAAGCAAGGAGGAGGAAGAAGATGTACAGTTCAAGCAGGCTTGGCTCA TATTTTTCTGGAGGAGGGCTAAGACCAACAACGTGGAAGAAGATATTGCCGAGGAGCGAT TGCACATGTGGATCGATCGACACGGCCAGCAACCAACGTCACATGACGCTGTGGATGTTG AGCAAGGCATACACGAGCTGAGGAAGCTTGGCATCGAGCAGCTCCTGTGGGAGCTCTCCC GCCACGAGGCGAACCTTGCCAAAGACAGTCCATCTGATGTCGAGGACCTGACCTAACAGT AACAGCCTGAGCGGACGACGGTGGCCATCTCCCACCCAAATGCAGTCCAGGCTCCAGCCA TATATTTGTATATCATACAGATAACTGGGACATGTAAACATTTTTTGTGGTTTTGGTTTT TCAGCTTTGTCACAAACAGTTCACTGACTCTCCCCGATGTACATAACTTCCACCCCCCGC TTTTGTTGTTTGTAAAAGGCAGCTTGAGGTGTGCAACGGAGAGTGTGTTGATGCGCACGG CGAAAAGGCGCGATAGATAGAAGAATGGCTGGTCAGCCGACTCTGCATGTATAGGTACCG TTACACGG