Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049225_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:21651502:21656668:-1 gene:Zm00001d049225 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 10 description:FHA domain-containing protein FHA2
Sequence

ATGGGGAACGCGCGGCGCCCCGCCGCTGACTCGGCGGCGGCGTCGGACCGGGAGGTCGGA
TTTGCGAAGCTACATGGCGAGTGCTTCGAGTACTACATGCAGACCTACTCCATCGTTCTA
GGTCGCCATAGCCGCCGTCGCAGCAAGGGCCCCGTCGCCGCCCCGCCGGAGGCCGACGAC
GGCGTCGACGTGGACCTCGGCGCCCTCGGAGCAGGCATGAACGTCTCCCGCCGCCACGCG
CGCATTTTCTACGACTTCCTGCGCCGCCGTTTCGCGCTTGAGGTGCTTGGTAAGAACGGC
TGCCTCGTCGAGGGCGTGCACCACGTCCCCGGGTCCGCCCCCGTCAAGCTCGACTCCCAG
GACCTCCTCCAGATGGGGGACACCAAGTTCTACTTCCTCCTCCCCTCCCGCTCCGTCTTC
GACGCCGGCATCACGCGCCGGTCATCCGCCGTTCAGCGCGCGATCCCGCCGCCTCCGTCT
GATGATGACGAGGATGAGGATGAACATGAAGAGGCCGTGGCAGCGGCGAAGCGTCGGAGG
GACGGTTATAACGGATCAAAATCTTACAGGGAAGCAGATGATCAACTATTGCTTCAGTTG
GAAGAGAAAGATGTCATCTCATCTGCTGCTACTATCTTGTCTGATCTCTGTGGACCTCAG
GAATGGATTTCTATAAACAAGCTTCATGAAGTGATGTTTGATAAGTACGGCGGTATGTGG
CACCACAGCAGGGTGCGAAAATACCTGACATCCGAAGACTTTGCGGAGGCTGAAACTGAC
GGCAGGCTATGGCATGGACTTGCGTTGCTGCTGAGAAAGTACCCTGAGCATTTCGTGATC
AACATTAGGAAAGGTGGGGGCTTGATCACTGAGTTCGTCTCTTTGGTCTCGCTACAGTCT
TGA

Peptide Sequence

PEP ID

Zm00001d049225_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:21651502:21656668:-1 gene:Zm00001d049225 transcript:Zm00001d049225_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 10 description:FHA domain-containing protein FHA2
Sequence

MGNARRPAADSAAASDREVGFAKLHGECFEYYMQTYSIVLGRHSRRRSKGPVAAPPEADD
GVDVDLGALGAGMNVSRRHARIFYDFLRRRFALEVLGKNGCLVEGVHHVPGSAPVKLDSQ
DLLQMGDTKFYFLLPSRSVFDAGITRRSSAVQRAIPPPPSDDDEDEDEHEEAVAAAKRRR
DGYNGSKSYREADDQLLLQLEEKDVISSAATILSDLCGPQEWISINKLHEVMFDKYGGMW
HHSRVRKYLTSEDFAEAETDGRLWHGLALLLRKYPEHFVINIRKGGGLITEFVSLVSLQS

Transcript Sequence

Transcript ID

Zm00001d049225_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:21651502:21656668:-1 gene:Zm00001d049225 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 10 description:FHA domain-containing protein FHA2
Sequence

ATTGCCCTAAATCCTAACCAGAATCAAACGGTCCAAACCCCAAGCCCCTCCTCGCCTCCT
CGGCCACGCATGGGGAACGCGCGGCGCCCCGCCGCTGACTCGGCGGCGGCGTCGGACCGG
GAGGTCGGATTTGCGAAGCTACATGGCGAGTGCTTCGAGTACTACATGCAGACCTACTCC
ATCGTTCTAGGTCGCCATAGCCGCCGTCGCAGCAAGGGCCCCGTCGCCGCCCCGCCGGAG
GCCGACGACGGCGTCGACGTGGACCTCGGCGCCCTCGGAGCAGGCATGAACGTCTCCCGC
CGCCACGCGCGCATTTTCTACGACTTCCTGCGCCGCCGTTTCGCGCTTGAGGTGCTTGGT
AAGAACGGCTGCCTCGTCGAGGGCGTGCACCACGTCCCCGGGTCCGCCCCCGTCAAGCTC
GACTCCCAGGACCTCCTCCAGATGGGGGACACCAAGTTCTACTTCCTCCTCCCCTCCCGC
TCCGTCTTCGACGCCGGCATCACGCGCCGGTCATCCGCCGTTCAGCGCGCGATCCCGCCG
CCTCCGTCTGATGATGACGAGGATGAGGATGAACATGAAGAGGCCGTGGCAGCGGCGAAG
CGTCGGAGGGACGGTTATAACGGATCAAAATCTTACAGGGAAGCAGATGATCAACTATTG
CTTCAGTTGGAAGAGAAAGATGTCATCTCATCTGCTGCTACTATCTTGTCTGATCTCTGT
GGACCTCAGGAATGGATTTCTATAAACAAGCTTCATGAAGTGATGTTTGATAAGTACGGC
GGTATGTGGCACCACAGCAGGGTGCGAAAATACCTGACATCCGAAGACTTTGCGGAGGCT
GAAACTGACGGCAGGCTATGGCATGGACTTGCGTTGCTGCTGAGAAAGTACCCTGAGCAT
TTCGTGATCAACATTAGGAAAGGTGGGGGCTTGATCACTGAGTTCGTCTCTTTGGTCTCG
CTACAGTCTTGAGAATTTCTCAAAACACACTGCAGCAAGGCGGTGGTGTTGTATAGCTCC
GAGTATTCTTTTGCTACCTTTTGTAAAAAAAAGAGTTAGGGTAAAAGGGATTTGTGCTTA
AGTATTTGGCTATTAGCCAAGTTATAAGAGTGAGGCTATACAACAGTGGTATCTTATTAA
TCTTGAGAAGCTTTTTTATTGTTA