Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049219_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:21199758:21201333:-1 gene:Zm00001d049219 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	ATGGCGCCCTACATTGTCGTCAACAAAACCGTGATCGCATTCACAGCGGTGGCCCTGACG ATTCTTGCTGTGAAAACCATGATGGCCGAGGCCCGAGACCTGTCGTCCACCTCCACCGGT GGCTATGGCGAGGAAGCCATGAAAGTGAGGCATCAGCAGTGGATGGCGGAGCACGGCCGC ACCTACAGGGACGAGGCTGAGAAGGCGCACCGGTTCCAGGTATTCAAGGCGAACGCCGAT TTTGTTGACGCGTCCAATGCCGCAGGTGACGACAAGAAGAGCTATCGGATGGAGCTCAAC GAGTTCGCCGACATGACCAACGACGAGTTCATGGCCATGTACACTGGCTTGAGACCAGTC CCGGCAGGGGCAAAGAAGATGGCCGGTTTCAAGTACGGGAACGTGACTCTTTCAGACGCC GACGACAACCAGCAGACGGTTGACTGGAGGCAGAAAGGCGCGGTCACCGGTATCAAGAAC CAGGGCCAGTGTGTAGACTGTTGTTGCTGGGCCTTCGCTGCGGTGGCGGCCGTGGAGGGC ATCCACCAGATTACGACGGGCAACTTGGTGTCGTTATCGGAGCAGCAGGTGCTGGACTGC GACACCGAGGGGAACAACGGCTGCAACGGCGGCTACATCGACAATGCCTTCCAATACATC GCCGGCAACGGCGGCCTCGCCACCGAGGACGCCTACCCGTACACCGCCGCGCAGGCCATG TGCCAGTCCGTGCAGCCGGTGGCCGCCATCAGCGGCTACCAGGACGTGCCGAGCGGCGAC GAGGCAGCGCTCGCCGCGGCCGTCGCCAACCAGCCGGTGTCGGTTGCCATCGACGCACAT AACTTCCAGCTCTACGGTGGCGGGGTGATGACCGCGGCCAGCTGCAGCACGCCGCCGAAC CTGAACCACGCCGTCACGGCGGTAGGCTACGGCACGGCGGAGGATGGGACCCCGTACTGG CTGCTCAAGAACCAGTGGGGCCAGAACTGGGGAGAGGGAGGATACCTCAGGCTCGAGAGA GGCGCAAACGCCTGTGGTGTCGCCCAGCAAGCCTCCTACCCGGTCGCATGA

Peptide Sequence

PEP ID	Zm00001d049219_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:21199758:21201333:-1 gene:Zm00001d049219 transcript:Zm00001d049219_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	MAPYIVVNKTVIAFTAVALTILAVKTMMAEARDLSSTSTGGYGEEAMKVRHQQWMAEHGR TYRDEAEKAHRFQVFKANADFVDASNAAGDDKKSYRMELNEFADMTNDEFMAMYTGLRPV PAGAKKMAGFKYGNVTLSDADDNQQTVDWRQKGAVTGIKNQGQCVDCCCWAFAAVAAVEG IHQITTGNLVSLSEQQVLDCDTEGNNGCNGGYIDNAFQYIAGNGGLATEDAYPYTAAQAM CQSVQPVAAISGYQDVPSGDEAALAAAVANQPVSVAIDAHNFQLYGGGVMTAASCSTPPN LNHAVTAVGYGTAEDGTPYWLLKNQWGQNWGEGGYLRLERGANACGVAQQASYPVA

Transcript Sequence

Transcript ID	Zm00001d049219_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:21199758:21201333:-1 gene:Zm00001d049219 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	TGCACACAAAGCAGTGCATGCACTAGCTAGCTCTAGCTTCGCCATTGCATTCGCTTACTG GGAGTACGTCTGGTACTTGCACAACTAGCTATATATATCATGGCGCCCTACATTGTCGTC AACAAAACCGTGATCGCATTCACAGCGGTGGCCCTGACGATTCTTGCTGTGAAAACCATG ATGGCCGAGGCCCGAGACCTGTCGTCCACCTCCACCGGTGGCTATGGCGAGGAAGCCATG AAAGTGAGGCATCAGCAGTGGATGGCGGAGCACGGCCGCACCTACAGGGACGAGGCTGAG AAGGCGCACCGGTTCCAGGTATTCAAGGCGAACGCCGATTTTGTTGACGCGTCCAATGCC GCAGGTGACGACAAGAAGAGCTATCGGATGGAGCTCAACGAGTTCGCCGACATGACCAAC GACGAGTTCATGGCCATGTACACTGGCTTGAGACCAGTCCCGGCAGGGGCAAAGAAGATG GCCGGTTTCAAGTACGGGAACGTGACTCTTTCAGACGCCGACGACAACCAGCAGACGGTT GACTGGAGGCAGAAAGGCGCGGTCACCGGTATCAAGAACCAGGGCCAGTGTGTAGACTGT TGTTGCTGGGCCTTCGCTGCGGTGGCGGCCGTGGAGGGCATCCACCAGATTACGACGGGC AACTTGGTGTCGTTATCGGAGCAGCAGGTGCTGGACTGCGACACCGAGGGGAACAACGGC TGCAACGGCGGCTACATCGACAATGCCTTCCAATACATCGCCGGCAACGGCGGCCTCGCC ACCGAGGACGCCTACCCGTACACCGCCGCGCAGGCCATGTGCCAGTCCGTGCAGCCGGTG GCCGCCATCAGCGGCTACCAGGACGTGCCGAGCGGCGACGAGGCAGCGCTCGCCGCGGCC GTCGCCAACCAGCCGGTGTCGGTTGCCATCGACGCACATAACTTCCAGCTCTACGGTGGC GGGGTGATGACCGCGGCCAGCTGCAGCACGCCGCCGAACCTGAACCACGCCGTCACGGCG GTAGGCTACGGCACGGCGGAGGATGGGACCCCGTACTGGCTGCTCAAGAACCAGTGGGGC CAGAACTGGGGAGAGGGAGGATACCTCAGGCTCGAGAGAGGCGCAAACGCCTGTGGTGTC GCCCAGCAAGCCTCCTACCCGGTCGCATGATGAATACGTAAGGGTCGAAAAGAAAACATA TATTCTACACACACGAAGGCATGCATAAGAATGACTACTAAGGAATAAAGCATGCAAACA CATTGACAGAATGACAGTACATACATGCATAGCGTAAAATTGAATCACAATTGTCATGTA CAACACTCAAGATATCATTTATTTCTATTTGGCCTTCTTTTCAAAGATCGCTATTATATA TATACATGTAAGGTAACAAGATTTTATAGCATAAGTCCTTCGCACCTCGCCAATTGTCTA TCCCTCTGTATCATATATAAGATGATGTTTGCCTAGTTTGTT