Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049219_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:21199758:21201330:-1 gene:Zm00001d049219 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	ATGGCGCCCTACATTGTCGTCAACAAAACCGTGATCGCATTCACAGCGGTGGCCCTGACG ATTCTTGCTGTGAAAACCATGATGGCCGAGGCCCGAGACCTGTCGTCCACCTCCACCGGT GGCTATGGCGAGGAAGCCATGAAAGTGAGGCATCAGCAGTGGATGGCGGAGCACGGCCGC ACCTACAGGGACGAGGCTGAGAAGGCGCACCGGTTCCAGGTATTCAAGGCGAACGCCGAT TTTGTTGACGCGTCCAATGCCGCAGGTGACGACAAGAAGAGCTATCGGATGGAGCTCAAC GAGTTCGCCGACATGACCAACGACGAGTTCATGGCCATGTACACTGGCTTGAGACCAGTC CCGGCAGGGGCAAAGAAGATGGCCGGTTTCAAGTACGGGAACGTGACTCTTTCAGACGCC GACGACAACCAGCAGACGGTTGACTGGAGGCAGAAAGGCGCGGTCACCGGTATCAAGAAC CAGGGCCAGTGTGGTTGTTGCTGGGCCTTCGCTGCGGTGGCGGCCGTGGAGGGCATCCAC CAGATTACGACGGGCAACTTGGTGTCGTTATCGGAGCAGCAGGTGCTGGACTGCGACACC GAGGGGAACAACGGCTGCAACGGCGGCTACATCGACAATGCCTTCCAATACATCGCCGGC AACGGCGGCCTCGCCACCGAGGACGCCTACCCGTACACCGCCGCGCAGGCCATGTGCCAG TCCGTGCAGCCGGTGGCCGCCATCAGCGGCTACCAGGACGTGCCGAGCGGCGACGAGGCA GCGCTCGCCGCGGCCGTCGCCAACCAGCCGGTGTCGGTTGCCATCGACGCACATAACTTC CAGCTCTACGGTGGCGGGGTGATGACCGCGGCCAGCTGCAGCACGCCGCCGAACCTGAAC CACGCCGTCACGGCGGTAGGCTACGGCACGGCGGAGGATGGGACCCCGTACTGGCTGCTC AAGAACCAGTGGGGCCAGAACTGGGGAGAGGGAGGATACCTCAGGCTCGAGAGAGGCGCA AACGCCTGTGGTGTCGCCCAGCAAGCCTCCTACCCGGTCGCATGA

Peptide Sequence

PEP ID	Zm00001d049219_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:21199758:21201330:-1 gene:Zm00001d049219 transcript:Zm00001d049219_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	MAPYIVVNKTVIAFTAVALTILAVKTMMAEARDLSSTSTGGYGEEAMKVRHQQWMAEHGR TYRDEAEKAHRFQVFKANADFVDASNAAGDDKKSYRMELNEFADMTNDEFMAMYTGLRPV PAGAKKMAGFKYGNVTLSDADDNQQTVDWRQKGAVTGIKNQGQCGCCWAFAAVAAVEGIH QITTGNLVSLSEQQVLDCDTEGNNGCNGGYIDNAFQYIAGNGGLATEDAYPYTAAQAMCQ SVQPVAAISGYQDVPSGDEAALAAAVANQPVSVAIDAHNFQLYGGGVMTAASCSTPPNLN HAVTAVGYGTAEDGTPYWLLKNQWGQNWGEGGYLRLERGANACGVAQQASYPVA

Transcript Sequence

Transcript ID	Zm00001d049219_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:21199758:21201330:-1 gene:Zm00001d049219 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	ACACAAAGCAGTGCATGCACTAGCTAGCTCTAGCTTCGCCATTGCATTCGCTTACTGGGA GTACGTCTGGTACTTGCACAACTAGCTATATATATCATGGCGCCCTACATTGTCGTCAAC AAAACCGTGATCGCATTCACAGCGGTGGCCCTGACGATTCTTGCTGTGAAAACCATGATG GCCGAGGCCCGAGACCTGTCGTCCACCTCCACCGGTGGCTATGGCGAGGAAGCCATGAAA GTGAGGCATCAGCAGTGGATGGCGGAGCACGGCCGCACCTACAGGGACGAGGCTGAGAAG GCGCACCGGTTCCAGGTATTCAAGGCGAACGCCGATTTTGTTGACGCGTCCAATGCCGCA GGTGACGACAAGAAGAGCTATCGGATGGAGCTCAACGAGTTCGCCGACATGACCAACGAC GAGTTCATGGCCATGTACACTGGCTTGAGACCAGTCCCGGCAGGGGCAAAGAAGATGGCC GGTTTCAAGTACGGGAACGTGACTCTTTCAGACGCCGACGACAACCAGCAGACGGTTGAC TGGAGGCAGAAAGGCGCGGTCACCGGTATCAAGAACCAGGGCCAGTGTGGTTGTTGCTGG GCCTTCGCTGCGGTGGCGGCCGTGGAGGGCATCCACCAGATTACGACGGGCAACTTGGTG TCGTTATCGGAGCAGCAGGTGCTGGACTGCGACACCGAGGGGAACAACGGCTGCAACGGC GGCTACATCGACAATGCCTTCCAATACATCGCCGGCAACGGCGGCCTCGCCACCGAGGAC GCCTACCCGTACACCGCCGCGCAGGCCATGTGCCAGTCCGTGCAGCCGGTGGCCGCCATC AGCGGCTACCAGGACGTGCCGAGCGGCGACGAGGCAGCGCTCGCCGCGGCCGTCGCCAAC CAGCCGGTGTCGGTTGCCATCGACGCACATAACTTCCAGCTCTACGGTGGCGGGGTGATG ACCGCGGCCAGCTGCAGCACGCCGCCGAACCTGAACCACGCCGTCACGGCGGTAGGCTAC GGCACGGCGGAGGATGGGACCCCGTACTGGCTGCTCAAGAACCAGTGGGGCCAGAACTGG GGAGAGGGAGGATACCTCAGGCTCGAGAGAGGCGCAAACGCCTGTGGTGTCGCCCAGCAA GCCTCCTACCCGGTCGCATGATGAATACGTAAGGGTCGAAAAGAAAACATATATTCTACA CACACGAAGGCATGCATAAGAATGACTACTAAGGAATAAAGCATGCAAACACATTGACAG AATGACAGTACATACATGCATAGCGTAAAATTGAATCACAATTGTCATGTACAACACTCA AGATATCATTTATTTCTATTTGGCCTTCTTTTCAAAGATCGCTATTATATATATACATGT AAGGTAACAAGATTTTATAGCATAAGTCCTTCGCACCTCGCCAATTGTCTATCCCTCTGT ATCATATATAAGATGATGTTTGCCTAGTTTGTT