Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049196_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:20093745:20095181:1 gene:Zm00001d049196 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat protein PPR986-12
Sequence	ATGCCTTCGGCGCCGCTCGTCGCGGCTGCCATCGGCACGCGCGTCAGCCTCCGCCCGAAC CTCTCACTCCTCGCCGATCGTTGCGCTACACCTTGCGCCCTAGCCCGCGTGCACGCCGCC ATGCTCGTCTCCGGCCGCCTCGCCGAGGACGCTTTCGCCGCGTCCCGGCTCCTGGACGCC TACGTCGCGCTCTCTCCGGATCCCGCTGCCGCCGCACTCGCGCTCCTCTCCTCCCTGCCC TGCGCGCCCAACTCCTTCATGTTCAACACCACGCTCCGCGTGCTCGCTTCCTCCCCGGAC CCGGCCACCGCATTCCCCTTCTTCTCCCGCATCCACGGCACTGGAGCCCTCGTGCCCGGC CGGCACACATTCCCCTTCCTCCTGAAGGCCGCCGCGCGCCTTCCGCTCTCTCTCCCCGTC ACCGAACAGCTCCACGCGCTCGCCGTCCGGCACGGGGTCCACCTCGATGCCTACGTCGCC AATGGCCTCGTTCGGGCCTACTCCGTGGCGGGCCTTCTCCGCCCCGCGCGCAGGGTGTTC GACGAGGTGCCCGAGCGGAACGCGGCCGTGTACACTACCATGGTCTCCGCGTACGCGCAG AACGGGAGGCACGAGGACGCGATGGCGGCGTTCGTCCAGATGGTCCGCGTGGGCTTCGAG CCCTGCGGCGCCGCGCTGGCCTCGGTGCTGTCTGCGTGCGCGCGGTCGCCGTCGGGCGGG CTCGAGATGGGCCGTCACGTGCACGACCTAATGGTGGCACGGGGCGTGGCAGTTGGTCCC ATCCTCGGCACGGCGCTGGTCGACATGTACGTCAAAAATGGCGCCATTGAGGAGGCCTTG GCAGTGTTCGACGGGCTGCCAGAGCGGCGCGTGCCGGCTGCATGGAACCCTCTCATCTCG GGGCTGGCGAACCTCGGGCACGGTGAGCGTGCACTCGACTTTTTCAGACGGATGCAGCGG GAGGGTGTGCCACCGAATGCGACCACACTCGTCGGGGCACTCTCGGCGTGCTCCCACCCA GGGCTGCTGGACGAGGCCCGCCGGCTGTTCAGGTCCATGGAGAAGGACTTCGGGATCGTT CCAGGAATCCAGCACTACGGATGCATGGTGGACCTCCTTGGCCGTGCTGGCCTCTTATCG GAAGCGGAGGATATGATACGGGAGATGTCATGCAAGGCGGACACCGTGATATGGGGAGCA CTCCTGACGGCCTGCAAGAACCACGGTGTCATTGAGATTGCGGAGCGGGCAGCGGTGGAG ATGCTGAAACTAAATCCCAGTAACCATGGAGTGTATGTGGTACTGTCCAACTTGTATGCC GAGGCTGGTAGGTGGCAGGACGTGGACAAGCTGAGGAAGGTGATGAAGGGAGCGAGGCTC TCTAAAATCCCTGGGGCAAGCGCAGTTAATGGTGATGGGTCACTGGAGCAACCATAG

Peptide Sequence

PEP ID	Zm00001d049196_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:20093745:20095181:1 gene:Zm00001d049196 transcript:Zm00001d049196_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat protein PPR986-12
Sequence	MPSAPLVAAAIGTRVSLRPNLSLLADRCATPCALARVHAAMLVSGRLAEDAFAASRLLDA YVALSPDPAAAALALLSSLPCAPNSFMFNTTLRVLASSPDPATAFPFFSRIHGTGALVPG RHTFPFLLKAAARLPLSLPVTEQLHALAVRHGVHLDAYVANGLVRAYSVAGLLRPARRVF DEVPERNAAVYTTMVSAYAQNGRHEDAMAAFVQMVRVGFEPCGAALASVLSACARSPSGG LEMGRHVHDLMVARGVAVGPILGTALVDMYVKNGAIEEALAVFDGLPERRVPAAWNPLIS GLANLGHGERALDFFRRMQREGVPPNATTLVGALSACSHPGLLDEARRLFRSMEKDFGIV PGIQHYGCMVDLLGRAGLLSEAEDMIREMSCKADTVIWGALLTACKNHGVIEIAERAAVE MLKLNPSNHGVYVVLSNLYAEAGRWQDVDKLRKVMKGARLSKIPGASAVNGDGSLEQP

Transcript Sequence

Transcript ID	Zm00001d049196_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:20093745:20095181:1 gene:Zm00001d049196 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat protein PPR986-12
Sequence	ATGCCTTCGGCGCCGCTCGTCGCGGCTGCCATCGGCACGCGCGTCAGCCTCCGCCCGAAC CTCTCACTCCTCGCCGATCGTTGCGCTACACCTTGCGCCCTAGCCCGCGTGCACGCCGCC ATGCTCGTCTCCGGCCGCCTCGCCGAGGACGCTTTCGCCGCGTCCCGGCTCCTGGACGCC TACGTCGCGCTCTCTCCGGATCCCGCTGCCGCCGCACTCGCGCTCCTCTCCTCCCTGCCC TGCGCGCCCAACTCCTTCATGTTCAACACCACGCTCCGCGTGCTCGCTTCCTCCCCGGAC CCGGCCACCGCATTCCCCTTCTTCTCCCGCATCCACGGCACTGGAGCCCTCGTGCCCGGC CGGCACACATTCCCCTTCCTCCTGAAGGCCGCCGCGCGCCTTCCGCTCTCTCTCCCCGTC ACCGAACAGCTCCACGCGCTCGCCGTCCGGCACGGGGTCCACCTCGATGCCTACGTCGCC AATGGCCTCGTTCGGGCCTACTCCGTGGCGGGCCTTCTCCGCCCCGCGCGCAGGGTGTTC GACGAGGTGCCCGAGCGGAACGCGGCCGTGTACACTACCATGGTCTCCGCGTACGCGCAG AACGGGAGGCACGAGGACGCGATGGCGGCGTTCGTCCAGATGGTCCGCGTGGGCTTCGAG CCCTGCGGCGCCGCGCTGGCCTCGGTGCTGTCTGCGTGCGCGCGGTCGCCGTCGGGCGGG CTCGAGATGGGCCGTCACGTGCACGACCTAATGGTGGCACGGGGCGTGGCAGTTGGTCCC ATCCTCGGCACGGCGCTGGTCGACATGTACGTCAAAAATGGCGCCATTGAGGAGGCCTTG GCAGTGTTCGACGGGCTGCCAGAGCGGCGCGTGCCGGCTGCATGGAACCCTCTCATCTCG GGGCTGGCGAACCTCGGGCACGGTGAGCGTGCACTCGACTTTTTCAGACGGATGCAGCGG GAGGGTGTGCCACCGAATGCGACCACACTCGTCGGGGCACTCTCGGCGTGCTCCCACCCA GGGCTGCTGGACGAGGCCCGCCGGCTGTTCAGGTCCATGGAGAAGGACTTCGGGATCGTT CCAGGAATCCAGCACTACGGATGCATGGTGGACCTCCTTGGCCGTGCTGGCCTCTTATCG GAAGCGGAGGATATGATACGGGAGATGTCATGCAAGGCGGACACCGTGATATGGGGAGCA CTCCTGACGGCCTGCAAGAACCACGGTGTCATTGAGATTGCGGAGCGGGCAGCGGTGGAG ATGCTGAAACTAAATCCCAGTAACCATGGAGTGTATGTGGTACTGTCCAACTTGTATGCC GAGGCTGGTAGGTGGCAGGACGTGGACAAGCTGAGGAAGGTGATGAAGGGAGCGAGGCTC TCTAAAATCCCTGGGGCAAGCGCAGTTAATGGTGATGGGTCACTGGAGCAACCATAG