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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049183_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:19622983:19624218:1 gene:Zm00001d049183 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-ketoglutarate-dependent dioxygenase alkB
Sequence

ATGTACGGCACTTCCGACCCCACAGCTGCGGAGCGCACGGCTTTCCGGCGTGCGGAGAAA
CAGTACAAGCTTTACAAGACACTCAACGTCAAGGGCAGGTCCAGGTCCAGGTCCAGGTCA
GGATGCAGGCCGTCTAGCGGAGAGGGAGGTGGCGCTGATCTGTCAGCCGTAGTTGACTTC
CATGCTCTGCTTGCCGCCGACGGGGAGCTTCCTGACGGGATTGGTCGGCGTGAGTGCCCC
GGATTCGACCGCCCCGTGTTCTGCTTCTTGGACCGGCCAGGGTTCTATTTCATTCCTGGT
GCTTTATCAACTGAGGAACAATGCTGTTGGATCAGGGAAAGCTTGAAAACATTTCCACAG
CCACCTAATAGGACTAATTTGACTGCAATATATGGTTCAATTTCGGACTTACTCATCGCT
GCCGAAAATCAACAGATATTGGTTGAAGCAGAAAATCCTGATATCCAAGAAAGAAATAAA
CAGAATAATTGTGGAGGGAAAACAGAATCCAAATACTTCAAATTTGTGGACTCAGAGAGC
CAGAAAGGGGAAGAGCATAGGTCAAACGCAGCAACTACCCTTGTGAGGAAGCTCCGGTGG
AGCACCCTTGGTCTGCAATTTGATTGGTCAAAGATATAG

Peptide Sequence

PEP ID

Zm00001d049183_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:19622983:19624218:1 gene:Zm00001d049183 transcript:Zm00001d049183_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-ketoglutarate-dependent dioxygenase alkB
Sequence

MYGTSDPTAAERTAFRRAEKQYKLYKTLNVKGRSRSRSRSGCRPSSGEGGGADLSAVVDF
HALLAADGELPDGIGRRECPGFDRPVFCFLDRPGFYFIPGALSTEEQCCWIRESLKTFPQ
PPNRTNLTAIYGSISDLLIAAENQQILVEAENPDIQERNKQNNCGGKTESKYFKFVDSES
QKGEEHRSNAATTLVRKLRWSTLGLQFDWSKI

Transcript Sequence

Transcript ID

Zm00001d049183_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:19622983:19624218:1 gene:Zm00001d049183 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-ketoglutarate-dependent dioxygenase alkB
Sequence

AGCATTCCATTTCCAGGAAGGCCACGGCGGCGAGAACTCACTCGGGCGCTGCCGGCGATG
TACGGCACTTCCGACCCCACAGCTGCGGAGCGCACGGCTTTCCGGCGTGCGGAGAAACAG
TACAAGCTTTACAAGACACTCAACGTCAAGGGCAGGTCCAGGTCCAGGTCCAGGTCAGGA
TGCAGGCCGTCTAGCGGAGAGGGAGGTGGCGCTGATCTGTCAGCCGTAGTTGACTTCCAT
GCTCTGCTTGCCGCCGACGGGGAGCTTCCTGACGGGATTGGTCGGCGTGAGTGCCCCGGA
TTCGACCGCCCCGTGTTCTGCTTCTTGGACCGGCCAGGGTTCTATTTCATTCCTGGTGCT
TTATCAACTGAGGAACAATGCTGTTGGATCAGGGAAAGCTTGAAAACATTTCCACAGCCA
CCTAATAGGACTAATTTGACTGCAATATATGGTTCAATTTCGGACTTACTCATCGCTGCC
GAAAATCAACAGATATTGGTTGAAGCAGAAAATCCTGATATCCAAGAAAGAAATAAACAG
AATAATTGTGGAGGGAAAACAGAATCCAAATACTTCAAATTTGTGGACTCAGAGAGCCAG
AAAGGGGAAGAGCATAGGTCAAACGCAGCAACTACCCTTGTGAGGAAGCTCCGGTGGAGC
ACCCTTGGTCTGCAATTTGATTGGTCAAAGATATAG