Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049178_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:19296978:19299347:-1 gene:Zm00001d049178 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Sequence

ATGTGCGGAAAGATGGAGCACATCCACATGGAACACAAGGGCTTACTAGGTGGAGAATTT
AAAGATGGAATCTGCGCCTCAGTTCCCAGCCCCCTTCCTGGCACATCAAGCAGGCCGAAC
AGCATGGTTGTGAAGAAGGTTTGCCCGCGGGAGTTCATCCCGGCGCACATCATCGCGGAG
GCGATCTCGACGCTGCACGGGCTGGACCTGCGGTGGTCGGGGCCCATCACGCCCAGCGAG
CGGCAGTACGTGGAGCAGTACGTGCTGGCCATGTACCCGCAGTACTCGCACGGCCTCATC
GAGGACGGCAGCTGCGACAAGGACGACCTCTACTCCACCTACTACATGTCGCCGGAGGCC
GGCGGCGAGCGGCAGCGTTCGTCGCCGGCGGGGTCGCCGTCGTCGTCGGCCGGCACGAGG
CCCGACTCGGCGGACACGGTCCGGCTGGAGCCGTCGCGGCTGCTGGACATGCTCACCAAG
AAGTCGTCCTTCCCGGGGAGCTTCATCTCGATCCCGGAGATCCAGGCCAGGAACCGCGTG
CTCAGCCACTGCGGCCTCACCGACGACGAGTACCTCGTCCTCTTCGCGCCCACGCCGAGG
GACGCCATGATGCTGATTGGCGAGAGCTACCCGTTCTTCCGGAGCAGCTACTACATGTCG
ATCCTGGACGAGGAGAGCGACAGCATCCGCGCCTTCGCGGCGTACAAGGAGGCGAAGGTG
ATCGCGGCGCCGGAGTCGTGGCTGGACCTGCGCATCAAGGGGTCGCAGCTGAGCCAGTAC
TTCCGGCGCAAGTCCAAGCACGCGCCCAAGGGTCTGTTCGCGTACCCGGCCGTCGTCTCC
CCCTCCTCTTCGTCGCCGTCCGCCGCCGCCGCCTCGCGGTACTCGCTGCACTGGGTGTCC
GAGGCGCACCGCAACGCGTGGCACGTGGTCCTGGACGCCACCGCGCTGGCCGTCGGCGAG
GACCGCCTCCCGCTCTCGCTGCACCGCCCGGACTTCGTGCTGTGCACGCTCGGCGACGCC
ACGCGGCAGCAGCAGCAGCAGCAGCCAGCTGCGAGGGTCACCTGCCTCCTCGTCAGGAGG
CGGTCCTTCGATACCTCCCTCTCCTCCCAGCCGCAGAGGCAGTAG

Peptide Sequence

PEP ID

Zm00001d049178_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:19296978:19299347:-1 gene:Zm00001d049178 transcript:Zm00001d049178_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Sequence

MCGKMEHIHMEHKGLLGGEFKDGICASVPSPLPGTSSRPNSMVVKKVCPREFIPAHIIAE
AISTLHGLDLRWSGPITPSERQYVEQYVLAMYPQYSHGLIEDGSCDKDDLYSTYYMSPEA
GGERQRSSPAGSPSSSAGTRPDSADTVRLEPSRLLDMLTKKSSFPGSFISIPEIQARNRV
LSHCGLTDDEYLVLFAPTPRDAMMLIGESYPFFRSSYYMSILDEESDSIRAFAAYKEAKV
IAAPESWLDLRIKGSQLSQYFRRKSKHAPKGLFAYPAVVSPSSSSPSAAAASRYSLHWVS
EAHRNAWHVVLDATALAVGEDRLPLSLHRPDFVLCTLGDATRQQQQQQPAARVTCLLVRR
RSFDTSLSSQPQRQ

Transcript Sequence

Transcript ID

Zm00001d049178_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:19296978:19299347:-1 gene:Zm00001d049178 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Sequence

ATAACTCTTGTTCTCCATCGAAGAACAGACGACATACTCTCTCTCTCTCTCTCTTTGTCT
CTCTCTACTCTCTAGACAGTCGATTAAAGGTGCACAAATGTGCGGAAAGATGGAGCACAT
CCACATGGAACACAAGGGCTTACTAGGTGGAGAATTTAAAGATGGAATCTGCGCCTCAGT
TCCCAGCCCCCTTCCTGGCACATCAAGCAGGCCGAACAGCATGGTTGTGAAGAAGGTTTG
CCCGCGGGAGTTCATCCCGGCGCACATCATCGCGGAGGCGATCTCGACGCTGCACGGGCT
GGACCTGCGGTGGTCGGGGCCCATCACGCCCAGCGAGCGGCAGTACGTGGAGCAGTACGT
GCTGGCCATGTACCCGCAGTACTCGCACGGCCTCATCGAGGACGGCAGCTGCGACAAGGA
CGACCTCTACTCCACCTACTACATGTCGCCGGAGGCCGGCGGCGAGCGGCAGCGTTCGTC
GCCGGCGGGGTCGCCGTCGTCGTCGGCCGGCACGAGGCCCGACTCGGCGGACACGGTCCG
GCTGGAGCCGTCGCGGCTGCTGGACATGCTCACCAAGAAGTCGTCCTTCCCGGGGAGCTT
CATCTCGATCCCGGAGATCCAGGCCAGGAACCGCGTGCTCAGCCACTGCGGCCTCACCGA
CGACGAGTACCTCGTCCTCTTCGCGCCCACGCCGAGGGACGCCATGATGCTGATTGGCGA
GAGCTACCCGTTCTTCCGGAGCAGCTACTACATGTCGATCCTGGACGAGGAGAGCGACAG
CATCCGCGCCTTCGCGGCGTACAAGGAGGCGAAGGTGATCGCGGCGCCGGAGTCGTGGCT
GGACCTGCGCATCAAGGGGTCGCAGCTGAGCCAGTACTTCCGGCGCAAGTCCAAGCACGC
GCCCAAGGGTCTGTTCGCGTACCCGGCCGTCGTCTCCCCCTCCTCTTCGTCGCCGTCCGC
CGCCGCCGCCTCGCGGTACTCGCTGCACTGGGTGTCCGAGGCGCACCGCAACGCGTGGCA
CGTGGTCCTGGACGCCACCGCGCTGGCCGTCGGCGAGGACCGCCTCCCGCTCTCGCTGCA
CCGCCCGGACTTCGTGCTGTGCACGCTCGGCGACGCCACGCGGCAGCAGCAGCAGCAGCA
GCCAGCTGCGAGGGTCACCTGCCTCCTCGTCAGGAGGCGGTCCTTCGATACCTCCCTCTC
CTCCCAGCCGCAGAGGCAGTAGCCACTAGCCACAGCGAATTGGTGTTTGCGAGAGAAATA
GAAATCGAAGCAGGCGCGCGTGTTGCAAGATTGCTGCTTCTTGCCTGTGACTGTGAGCTA
GCCGTTTGGCTTGTGACTGCTGCAAGCAAATTGGTGTTTAGCCGATTCCGTTATCGTGTG
ATGCATGGTGAAACATTACAATAATAAATAAATACATAAACACCATTTTGACAGAGT