Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049171_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:19002054:19005122:-1 gene:Zm00001d049171 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase/lipooxygenase PLAT/LH2 family protein
Sequence

ATGGTGATCCTCTATCCAGGGTGTGTTGCTCCAACAGTTCACCGTGATTTTCTGCCCAGA
TGGGTGCTGCTGAACAACAGCTCGAGAATGTACTGCCATGTCTTTCCAGATAGAACGAAA
CCGAAAAGGCAATACAGGCATCAGTGGGTGCCTTGCTTCTCCAAGGGATCTTCGTTCCAA
GATCCACTGCCCTCTGTAAAGCCTTCACGCCTTCTTCCAGCAGAGGAACTAAAGACATAT
CCCAACACTGTTCCTGAGGAGATATTTAACACGATCATACTAGATGACTCCGATGCATTC
TATGTGCTAGAACTGAGCACGAGTAGAGAATTTAGTTCCTCTTTGGATAAAAATTCTGCA
ATCTTAATCTGCCTATTTGATGTCGATGGTGACTCCCTATTACAAAGAGTACCGGCAATC
TATTTGGGTCAACCTACACATGGATTTAAGACAGAGCAGCAGATACCCTTCCAAAGTGGT
TCAGTTGATATCGTTACTTTCAAGGGGTCAAAACTGAAAACGATTAAAGAAGTCTGGATC
GGTCTTGAATCAGGTTCATGGAGATTAGATGGTTTGAGCTTGAAAGTAATACATGGACCA
GTTGGTCAGCCTAAAGAAATAAATGGAACTCCAGAACAGAAGTTCAGCGGTTTGCAGTAC
ACTTTTGAGAACGTAAATGTGTTCCTTGGAGATGATGGAGCTTCAGTAGCTGAAGCAAGG
CCGACGGCTATCACTGACCTCTCAGGAGTCGGCCTTTCTGATCTTCAACAAGGGATGTTA
TCCTCAAGAAGCAAAGCTTCAAGCATTCAGGAAGTAAGAGAGGATGGGTTGAGAGAGTAC
GCCGACCTTAAACAATCTCTGCTGCTCTATGACGCATCTATAGTGATAACCGGCTTCTCT
ACCTTCATCTTGGCTTCAAATGACAGCGCTGCCTATTCGTTCCTGATAGGTGGCATTGGA
GGGTTCCTGTACCTGTTGCTGCTCCAAAGATCGGTTGATGGTTTGCCTGTGATCGGTTCA
CCTTCAGAAGCTGGCGGTGCACAGCCTTCGGTAAAAAGTTTCAGCGGTGTAAGGAGGCCA
TGGTTGATACTATCACTAGTACTGGTTGCAGGTGCAGTTGCACTGAAGTATGGTGCTGGA
GGCGACAGCTTTGCGCTCACACCCACCGACCTCTTTGTTGGCACTGCAGGGTTCCTAGCA
AACAAGGTTGCTGTTCTTCTTGCAGCGTTCATGCCTATGCTAAGTGACTCAAAGAGTGAA
GATGGATCTGGTGACAGCAGTTAA

Peptide Sequence

PEP ID

Zm00001d049171_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:19002054:19005122:-1 gene:Zm00001d049171 transcript:Zm00001d049171_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase/lipooxygenase PLAT/LH2 family protein
Sequence

MVILYPGCVAPTVHRDFLPRWVLLNNSSRMYCHVFPDRTKPKRQYRHQWVPCFSKGSSFQ
DPLPSVKPSRLLPAEELKTYPNTVPEEIFNTIILDDSDAFYVLELSTSREFSSSLDKNSA
ILICLFDVDGDSLLQRVPAIYLGQPTHGFKTEQQIPFQSGSVDIVTFKGSKLKTIKEVWI
GLESGSWRLDGLSLKVIHGPVGQPKEINGTPEQKFSGLQYTFENVNVFLGDDGASVAEAR
PTAITDLSGVGLSDLQQGMLSSRSKASSIQEVREDGLREYADLKQSLLLYDASIVITGFS
TFILASNDSAAYSFLIGGIGGFLYLLLLQRSVDGLPVIGSPSEAGGAQPSVKSFSGVRRP
WLILSLVLVAGAVALKYGAGGDSFALTPTDLFVGTAGFLANKVAVLLAAFMPMLSDSKSE
DGSGDSS

Transcript Sequence

Transcript ID

Zm00001d049171_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:19002054:19005122:-1 gene:Zm00001d049171 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase/lipooxygenase PLAT/LH2 family protein
Sequence

AACGCGGCACGCCTCTTGCCTCACCACAGGCCAGACGAAGAAGCGGACCACACGCCACCA
GCTCCACCTCCACGGAATCAGACGGTCTCCTCCTCCTTTTCTTTCTCCCGTGGACTGCAG
CGCCGCCGGGTAGAGATCCCAAATCTGCGCCTCGACCAATTCCTCCTTCCTCCGAGAATG
GTGATCCTCTATCCAGGGTGTGTTGCTCCAACAGTTCACCGTGATTTTCTGCCCAGATGG
GTGCTGCTGAACAACAGCTCGAGAATGTACTGCCATGTCTTTCCAGATAGAACGAAACCG
AAAAGGCAATACAGGCATCAGTGGGTGCCTTGCTTCTCCAAGGGATCTTCGTTCCAAGAT
CCACTGCCCTCTGTAAAGCCTTCACGCCTTCTTCCAGCAGAGGAACTAAAGACATATCCC
AACACTGTTCCTGAGGAGATATTTAACACGATCATACTAGATGACTCCGATGCATTCTAT
GTGCTAGAACTGAGCACGAGTAGAGAATTTAGTTCCTCTTTGGATAAAAATTCTGCAATC
TTAATCTGCCTATTTGATGTCGATGGTGACTCCCTATTACAAAGAGTACCGGCAATCTAT
TTGGGTCAACCTACACATGGATTTAAGACAGAGCAGCAGATACCCTTCCAAAGTGGTTCA
GTTGATATCGTTACTTTCAAGGGGTCAAAACTGAAAACGATTAAAGAAGTCTGGATCGGT
CTTGAATCAGGTTCATGGAGATTAGATGGTTTGAGCTTGAAAGTAATACATGGACCAGTT
GGTCAGCCTAAAGAAATAAATGGAACTCCAGAACAGAAGTTCAGCGGTTTGCAGTACACT
TTTGAGAACGTAAATGTGTTCCTTGGAGATGATGGAGCTTCAGTAGCTGAAGCAAGGCCG
ACGGCTATCACTGACCTCTCAGGAGTCGGCCTTTCTGATCTTCAACAAGGGATGTTATCC
TCAAGAAGCAAAGCTTCAAGCATTCAGGAAGTAAGAGAGGATGGGTTGAGAGAGTACGCC
GACCTTAAACAATCTCTGCTGCTCTATGACGCATCTATAGTGATAACCGGCTTCTCTACC
TTCATCTTGGCTTCAAATGACAGCGCTGCCTATTCGTTCCTGATAGGTGGCATTGGAGGG
TTCCTGTACCTGTTGCTGCTCCAAAGATCGGTTGATGGTTTGCCTGTGATCGGTTCACCT
TCAGAAGCTGGCGGTGCACAGCCTTCGGTAAAAAGTTTCAGCGGTGTAAGGAGGCCATGG
TTGATACTATCACTAGTACTGGTTGCAGGTGCAGTTGCACTGAAGTATGGTGCTGGAGGC
GACAGCTTTGCGCTCACACCCACCGACCTCTTTGTTGGCACTGCAGGGTTCCTAGCAAAC
AAGGTTGCTGTTCTTCTTGCAGCGTTCATGCCTATGCTAAGTGACTCAAAGAGTGAAGAT
GGATCTGGTGACAGCAGTTAATTGGACTTCTTTAAAAATATGTTAGTAATAGTTTCCTAT
AGAAGATCTGTATTCAAGACTGGAACGGAATTAGCTGAAGTGCAAAGGACAAGTCCTAGT
TTCTGAACTGGAAAAAAGAACCCTCTCATCTTGGTGACTGTGTCATCCTTGCAAGGGTTC
AATTCACAGCAAGAGTTCAAGTGTTGTGGCAGTTTGAAGTCAGAAACTTAAGTTGTATTT
TTCAGACATGCAGGACAGCTGTGTATCATTATATCAAGAAGAAGAAGAACAAAAGTCTAG
GATACTTTGAAGCACCCTTAGAAAGGCATGACCAGTACAGCAGAAGAAAAACAGAGACAC
AAAAACTAAGGACATGGCCATAAACTACGGAGCGTTTTGGCTTTTGCCATACAGCACAAC
TTGATTTCATCTTAGAAACTTGAGTTGTAGTATAGTATACTCACCTATCGGACACTGAAC
TGTTAAGATGATATACCGACTACAGCTTTGTTGTATGTAAAAATATGACATTTGTGAGGT
TAAATACACAGTAACTATCGAAAC