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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049165_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:18638637:18650497:1 gene:Zm00001d049165 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SBP-transcription factor 3 description:Squamosa promoter-binding-like protein 18
Sequence

ATGGACTGGGCAGCGGCGTCCGGGTCTCCGTCGTGGGGCGCGGCGGCGACGGACCCCGGT
CCGACCATGCTGTCCTTCGCAGGCCCGTCCTCCTCCGCCGCCGACGCCGAGGTGCGGCTC
CAGGATTTCGCCGCGGGTCTTGCCCAGAGCTCGCGGCCGACTGGGGCGGCGCCGGGAGCC
GGGAGGAGGTCCCGCGCGGCCGTGGGAGGTGCCGGCGCGGAGGCGTGCTCCGTCGACGGC
TGCCGCTCTGATCTCAGCCGGTGCCGCGAGTACCACCGGCGGCATAAGGTCTGTGAGGCA
CACTCCAAGGCGCCGGTGGTGGTCGTCGGCGGACAGGAGCGGCGCTTCTGCCAGCAATGC
AGCCGGTTTCACATGCTGTCCGAGTTTGACGAGGAAAAAAGAAGTTGCCGGAAGCGTCTG
GATGGCCATAATAGGCGTCGAAGAAAGCCACAGCATGATCTGACAAATCTAGGGGGTTTC
TTTCCATACCACCAAGTGAATCAGTTTGAGTTCTACCCACAAACAATTCCAACAGTTGGC
CAGAATTCGGACGCCGTGCACTTGGTGGGCCGTCAGCAGCCTTTCTCCATATCGTTCTCA
AGAACACCAGACGAGTTCCCTTTCCCACAGGGTGGCGGTAGCAGTGTGCTGCACCACCTC
CATGCAGCCCGCCCTGGCCATCACGCTGAAGGCAGCAGCCACACTGGAAGCAGCACACGC
GACAACGCTCTCTCCGGCACACTGGGCCCCGAGTGTGCTCTCTCTCTTCTGTCATCGTCG
CTGCGTCGCCCCTCAACTGCTGGCGTCCCCGCCGTTGGCCAACCCCAGGTTACTGCCTCT
TCGACCACTGCCGTGTCGCAGGCTGCAACGGCAGCTGTGGCCACTGCTGCATTCGCGGCC
AGTGCTGGCCACCATGTGTTTGTTCCTGATGCTATGTTTGAGGATCCATCACAGGCACTG
CCATTCTCTTGGCAGTAG

Peptide Sequence

PEP ID

Zm00001d049165_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:18638637:18650497:1 gene:Zm00001d049165 transcript:Zm00001d049165_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SBP-transcription factor 3 description:Squamosa promoter-binding-like protein 18
Sequence

MDWAAASGSPSWGAAATDPGPTMLSFAGPSSSAADAEVRLQDFAAGLAQSSRPTGAAPGA
GRRSRAAVGGAGAEACSVDGCRSDLSRCREYHRRHKVCEAHSKAPVVVVGGQERRFCQQC
SRFHMLSEFDEEKRSCRKRLDGHNRRRRKPQHDLTNLGGFFPYHQVNQFEFYPQTIPTVG
QNSDAVHLVGRQQPFSISFSRTPDEFPFPQGGGSSVLHHLHAARPGHHAEGSSHTGSSTR
DNALSGTLGPECALSLLSSSLRRPSTAGVPAVGQPQVTASSTTAVSQAATAAVATAAFAA
SAGHHVFVPDAMFEDPSQALPFSWQ

Transcript Sequence

Transcript ID

Zm00001d049165_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:18638637:18650497:1 gene:Zm00001d049165 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SBP-transcription factor 3 description:Squamosa promoter-binding-like protein 18
Sequence

ATATCTTCTCTTGCGGTAGCTTTATTGCACATCCTGCGGGCCTTCTTGCGTGGATGCTCC
CCTCTTGGCTATTTGTTTGTTTCTTGCAGAGGAATTTTTTCCTGAACTTGTCCTCGCCGT
CTTGAAGGTTTCTTGTTTGGGAGCAGGCGGAGGCGTTTCTTTCCTTCTTCGCCGGCGGCG
GCATGGACTGGGCAGCGGCGTCCGGGTCTCCGTCGTGGGGCGCGGCGGCGACGGACCCCG
GTCCGACCATGCTGTCCTTCGCAGGCCCGTCCTCCTCCGCCGCCGACGCCGAGGTGCGGC
TCCAGGATTTCGCCGCGGGTCTTGCCCAGAGCTCGCGGCCGACTGGGGCGGCGCCGGGAG
CCGGGAGGAGGTCCCGCGCGGCCGTGGGAGGTGCCGGCGCGGAGGCGTGCTCCGTCGACG
GCTGCCGCTCTGATCTCAGCCGGTGCCGCGAGTACCACCGGCGGCATAAGGTCTGTGAGG
CACACTCCAAGGCGCCGGTGGTGGTCGTCGGCGGACAGGAGCGGCGCTTCTGCCAGCAAT
GCAGCCGGTTTCACATGCTGTCCGAGTTTGACGAGGAAAAAAGAAGTTGCCGGAAGCGTC
TGGATGGCCATAATAGGCGTCGAAGAAAGCCACAGCATGATCTGACAAATCTAGGGGGTT
TCTTTCCATACCACCAAGTGAATCAGTTTGAGTTCTACCCACAAACAATTCCAACAGTTG
GCCAGAATTCGGACGCCGTGCACTTGGTGGGCCGTCAGCAGCCTTTCTCCATATCGTTCT
CAAGAACACCAGACGAGTTCCCTTTCCCACAGGGTGGCGGTAGCAGTGTGCTGCACCACC
TCCATGCAGCCCGCCCTGGCCATCACGCTGAAGGCAGCAGCCACACTGGAAGCAGCACAC
GCGACAACGCTCTCTCCGGCACACTGGGCCCCGAGTGTGCTCTCTCTCTTCTGTCATCGT
CGCTGCGTCGCCCCTCAACTGCTGGCGTCCCCGCCGTTGGCCAACCCCAGGTTACTGCCT
CTTCGACCACTGCCGTGTCGCAGGCTGCAACGGCAGCTGTGGCCACTGCTGCATTCGCGG
CCAGTGCTGGCCACCATGTGTTTGTTCCTGATGCTATGTTTGAGGATCCATCACAGGCAC
TGCCATTCTCTTGGCAGTAGGATTGTTTTGTTGTCCTGTTTTTATGTGCTCCTGTTGTGT
TCTCGATCGATACTCTAGTGTCTGATGGCTGGGAATTCGGGGTACCTGTGCACTTGCAGA
CTCAGGTTGTGGTCCGTCAGAGATGTATACAAGTGACACGACGACTAGTGCTGGCATCTG
AAAGGAAGTGGTAGCTGCTGTGCAGAGTGTTTAGCCGTTAAATTCAAATGCGCCCGTTCA
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