Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d049113_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:16448731:16450218:-1 gene:Zm00001d049113 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	ATGGATCAGTCAAACATTAGCAACAAGCACATGACGATGACAACCCTAATGCTCCTCCTC TGTGTCATAGCCATTGCAGATTGCATTTGCCACGCCGCAGTGGCAGCCCGGGTGGAGCCA TCCACCACCGTCGGCAGAACTACAGGAGGAGACGAGGCGATGATGATGGCGAGGTACAAG AAGTGGATGGCGCAGTATCGCCGGAAGTACAAGGACGACGCCGAGAAAGCACACCGTTTC CAGGTATTCAAGGCGAACGCGGAGTTTATTGACAGGTCTAACGCTGGAGGAAAGAAGAAG TACGTCCTAGGGACCAACCAGTTCGCCGACCTGACCAGCAAAGAGTTCGCGGCCATGTAC ACCGGTTTGAGGAAACCGGCGGCGGTGCCTTCCGGGGCCAAGCAGATCCCTGCAGCTGGT TCCAAGTACCAGAATTTTACGCGCCTAGATGATGATGTCCAGGTTGATTGGAGGCAGCAG GGTGCTGTCACTCCTGTCAAGAACCAAGGCCAATGTGGCTGTTGCTGGGCGTTCTCTGCA GTAGGTGCCATGGAAGGTTTGATCATGATAACGACAGGAAACCTGGTCTCCCTGTCGGAG CAGCAGATTCTAGACTGCGACGAGTCAGACGGGAACCAGGGCTGCAACGGTGGCTACATG GACAACGCCTTCCAGTACGTCATCAACAATGGCGGCGTCACCACTGAGGACGCCTACCCT TACTCTGCAGTCCAAGGGACGTGCCAAAACGTCCAGCCAGCCGCCACCATCAGCGGCTTC CAGGACCTGCCCAGCGGCGACGAGAACGCGCTCGCCAACGCAGTCGCCAACCAGCCGGTG TCTGTTGGCGTCGACGGCGGATCGAGTCCTTTCCAGTTTTACCAGGGTGGCATATACGAC GGGGATGGCTGTGGCACGGACATGAACCATGCAGTGACGGCGATCGGCTACGGCGCCGAT GACCAGGGAACCCAGTACTGGATCCTCAAGAACTCCTGGGGCACAGGATGGGGTGAGAAC GGTTTCATGCAGCTACAGATGGGCGTCGGCGCCTGTGGTATCTCCACGATGGCCTCCTAC CCAACTCCATGA

Peptide Sequence

PEP ID	Zm00001d049113_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:16448731:16450218:-1 gene:Zm00001d049113 transcript:Zm00001d049113_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	MDQSNISNKHMTMTTLMLLLCVIAIADCICHAAVAARVEPSTTVGRTTGGDEAMMMARYK KWMAQYRRKYKDDAEKAHRFQVFKANAEFIDRSNAGGKKKYVLGTNQFADLTSKEFAAMY TGLRKPAAVPSGAKQIPAAGSKYQNFTRLDDDVQVDWRQQGAVTPVKNQGQCGCCWAFSA VGAMEGLIMITTGNLVSLSEQQILDCDESDGNQGCNGGYMDNAFQYVINNGGVTTEDAYP YSAVQGTCQNVQPAATISGFQDLPSGDENALANAVANQPVSVGVDGGSSPFQFYQGGIYD GDGCGTDMNHAVTAIGYGADDQGTQYWILKNSWGTGWGENGFMQLQMGVGACGISTMASY PTP

Transcript Sequence

Transcript ID	Zm00001d049113_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:16448731:16450218:-1 gene:Zm00001d049113 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	ACGGGTGCTCCAAACAACTGCACTAGACATCTCAATTAATTAGCTAATGAGCAAGCGGCT GAGCTGCACTCAAGACAAACTACCATGGATCAGTCAAACATTAGCAACAAGCACATGACG ATGACAACCCTAATGCTCCTCCTCTGTGTCATAGCCATTGCAGATTGCATTTGCCACGCC GCAGTGGCAGCCCGGGTGGAGCCATCCACCACCGTCGGCAGAACTACAGGAGGAGACGAG GCGATGATGATGGCGAGGTACAAGAAGTGGATGGCGCAGTATCGCCGGAAGTACAAGGAC GACGCCGAGAAAGCACACCGTTTCCAGGTATTCAAGGCGAACGCGGAGTTTATTGACAGG TCTAACGCTGGAGGAAAGAAGAAGTACGTCCTAGGGACCAACCAGTTCGCCGACCTGACC AGCAAAGAGTTCGCGGCCATGTACACCGGTTTGAGGAAACCGGCGGCGGTGCCTTCCGGG GCCAAGCAGATCCCTGCAGCTGGTTCCAAGTACCAGAATTTTACGCGCCTAGATGATGAT GTCCAGGTTGATTGGAGGCAGCAGGGTGCTGTCACTCCTGTCAAGAACCAAGGCCAATGT GGCTGTTGCTGGGCGTTCTCTGCAGTAGGTGCCATGGAAGGTTTGATCATGATAACGACA GGAAACCTGGTCTCCCTGTCGGAGCAGCAGATTCTAGACTGCGACGAGTCAGACGGGAAC CAGGGCTGCAACGGTGGCTACATGGACAACGCCTTCCAGTACGTCATCAACAATGGCGGC GTCACCACTGAGGACGCCTACCCTTACTCTGCAGTCCAAGGGACGTGCCAAAACGTCCAG CCAGCCGCCACCATCAGCGGCTTCCAGGACCTGCCCAGCGGCGACGAGAACGCGCTCGCC AACGCAGTCGCCAACCAGCCGGTGTCTGTTGGCGTCGACGGCGGATCGAGTCCTTTCCAG TTTTACCAGGGTGGCATATACGACGGGGATGGCTGTGGCACGGACATGAACCATGCAGTG ACGGCGATCGGCTACGGCGCCGATGACCAGGGAACCCAGTACTGGATCCTCAAGAACTCC TGGGGCACAGGATGGGGTGAGAACGGTTTCATGCAGCTACAGATGGGCGTCGGCGCCTGT GGTATCTCCACGATGGCCTCCTACCCAACTCCATGAACACAAATCTTCAGATAAAGCGTA GTATATACCAGTCCATGCATATGACTGCAGAATAAAGCATGGAAGATTAATTACATGCGT GCATCAAGGCATGCTACGTACTGTATTAAAACTTCGGTACTGGCCAGATATATACACAAA GGTAGAATGTTTGTGTGATAATATAGTAATGCTTGTACGAATGCAAAGAACATGACCTTT CAATAATAAATAAGATTAGGCT