Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049088_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:15686704:15691271:-1 gene:Zm00001d049088 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent (S)-NAD(P)H-hydrate dehydratase

Sequence

ATGAGCCGGCCCACGGGCGCGTGGCGACTAGGGATGGCAACGTGTACAATACCAGCAGCA
CCGCGTGCGCATGTGGGCCGCCTCCCCGGCATTCGGCAGGCAGCTCGTCCTGCTCTACTG
CTTCCTTCCTTCTCCTCCTCCACTCTCCTCTGTCACCGGCTTCCCCCCATCCTGCCCCTC
GTGCTCCAGCTCCTCCGGGTCCGGGCCAACCACGCGATGGCGGCGTCCGCCGGGACGGTG
TACGAGGCGGACGCGGAGGCCGTCGTGCGCCGGATCACGCCGGCACTCGACCGCGCCAGA
CACAAGGGCCAGGCAGGGAAGATAGCAGTAATCGGAGGATGTCGTGAGTACACTGGAGCT
CCTTATTTTGCCGCTATCTCTGCCTTGAAAGTTGGTGCAGATCTTTCACATGTTTTCTGC
ACGAAAGATGCTGCTACAGTAATTAAGAGCTATAGCCCTGAACTAATTGTACATCCAATA
TTAGAAGAATCTTACAGTGTAAGGGTTGATGAACGAGCATCTGTTTCTTCTAAGATTCTT
ACGGAAGTTGCAAAGTGGATGGAGCGCTTTGATTGCATTGTTGTTGGTCCTGGCCTTGGA
AGGGACCCCTTTCTTCTGGAATGTGTGAGTAATATCATGAGGCACGCACGACAGGCTAAT
ATTCCAACTGTTGTGGATGGGGATGGCCTATTTCTTGTAAACAATAACCTTAATCTTGTT
GAAGGAAACCCTCTTGCCATTTTAACACCAAATGTCTATGAGTACAAGCGTCTTGTTCAG
AAGGTTCTTAACTGTGACGTAGATGAGGAAAGTGCTTCTGAGCAGCTAATCGCACTTTGC
CAAAAAATTGGTGATGTAACAATAATGCAGAAAGGAAAAGCTGATGTCATCAGTGACGGT
AAAACAGCTAATACATATGTTGTTTTCATGTTTCTGAAATCTGAAGTTACACAAGTGAGT
ACTTTTGGTTCCCCAAGACGGTGTGGTGGTCAAGGTGACATCCTTTCTGGAAGTGTGGCA
GTATTTGCATCATGGGCACGACACTTTGTCTTGACAAACGAAGAACCTACAGAGAAAAGA
GTTAATCCTATGACCCTTGGGTGCATAGCTGCCTCCCTTCTACTCCGGAAAGCTGCGTCA
CATGCTTTTGAGAAGAACAAGAGATCGACTGTCACCTCTGATATCATTGAGTTCTTGGGC
AAAAGCTTGGAAGATATCTGCCCTGCCGAGCACTAG

Peptide Sequence

PEP ID

Zm00001d049088_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:15686704:15691271:-1 gene:Zm00001d049088 transcript:Zm00001d049088_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent (S)-NAD(P)H-hydrate dehydratase

Sequence

MSRPTGAWRLGMATCTIPAAPRAHVGRLPGIRQAARPALLLPSFSSSTLLCHRLPPILPL
VLQLLRVRANHAMAASAGTVYEADAEAVVRRITPALDRARHKGQAGKIAVIGGCREYTGA
PYFAAISALKVGADLSHVFCTKDAATVIKSYSPELIVHPILEESYSVRVDERASVSSKIL
TEVAKWMERFDCIVVGPGLGRDPFLLECVSNIMRHARQANIPTVVDGDGLFLVNNNLNLV
EGNPLAILTPNVYEYKRLVQKVLNCDVDEESASEQLIALCQKIGDVTIMQKGKADVISDG
KTANTYVVFMFLKSEVTQVSTFGSPRRCGGQGDILSGSVAVFASWARHFVLTNEEPTEKR
VNPMTLGCIAASLLLRKAASHAFEKNKRSTVTSDIIEFLGKSLEDICPAEH

Transcript Sequence

Transcript ID

Zm00001d049088_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:15686704:15691271:-1 gene:Zm00001d049088 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent (S)-NAD(P)H-hydrate dehydratase

Sequence

AGAGGATGCGGCTGCGTCCGACCTCCTTGCTTTTCGAGAATCCACTGCCTTCGATTCCTA
GTTTCCCACGGCAGGGCAGCCTCATCGGATCCCATGAGCCGGCCCACGGGCGCGTGGCGA
CTAGGGATGGCAACGTGTACAATACCAGCAGCACCGCGTGCGCATGTGGGCCGCCTCCCC
GGCATTCGGCAGGCAGCTCGTCCTGCTCTACTGCTTCCTTCCTTCTCCTCCTCCACTCTC
CTCTGTCACCGGCTTCCCCCCATCCTGCCCCTCGTGCTCCAGCTCCTCCGGGTCCGGGCC
AACCACGCGATGGCGGCGTCCGCCGGGACGGTGTACGAGGCGGACGCGGAGGCCGTCGTG
CGCCGGATCACGCCGGCACTCGACCGCGCCAGACACAAGGGCCAGGCAGGGAAGATAGCA
GTAATCGGAGGATGTCGTGAGTACACTGGAGCTCCTTATTTTGCCGCTATCTCTGCCTTG
AAAGTTGGTGCAGATCTTTCACATGTTTTCTGCACGAAAGATGCTGCTACAGTAATTAAG
AGCTATAGCCCTGAACTAATTGTACATCCAATATTAGAAGAATCTTACAGTGTAAGGGTT
GATGAACGAGCATCTGTTTCTTCTAAGATTCTTACGGAAGTTGCAAAGTGGATGGAGCGC
TTTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCCCTTTCTTCTGGAATGTGTG
AGTAATATCATGAGGCACGCACGACAGGCTAATATTCCAACTGTTGTGGATGGGGATGGC
CTATTTCTTGTAAACAATAACCTTAATCTTGTTGAAGGAAACCCTCTTGCCATTTTAACA
CCAAATGTCTATGAGTACAAGCGTCTTGTTCAGAAGGTTCTTAACTGTGACGTAGATGAG
GAAAGTGCTTCTGAGCAGCTAATCGCACTTTGCCAAAAAATTGGTGATGTAACAATAATG
CAGAAAGGAAAAGCTGATGTCATCAGTGACGGTAAAACAGCTAATACATATGTTGTTTTC
ATGTTTCTGAAATCTGAAGTTACACAAGTGAGTACTTTTGGTTCCCCAAGACGGTGTGGT
GGTCAAGGTGACATCCTTTCTGGAAGTGTGGCAGTATTTGCATCATGGGCACGACACTTT
GTCTTGACAAACGAAGAACCTACAGAGAAAAGAGTTAATCCTATGACCCTTGGGTGCATA
GCTGCCTCCCTTCTACTCCGGAAAGCTGCGTCACATGCTTTTGAGAAGAACAAGAGATCG
ACTGTCACCTCTGATATCATTGAGTTCTTGGGCAAAAGCTTGGAAGATATCTGCCCTGCC
GAGCACTAGCTCCTGCCAGTAATTGTAGTCATGCACGCGGAAGCCTAATAATGTTTATAT
GTCTGTTGAACAGGGTGTTACCATGCCTAATTCTAATGTTGCCCAGTGATGTTGAGAACT
GTGCAGTAGAAGCGTAAGATTGAAACTGGGGAACGACGACTAGAATTCTGAACACATGTT
TCTAGTCGCCTAGGACTATCCGTCTTCTTCTCGACAACACTATCACTATATATAAACTTG
ACCTTAG