Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049008_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:12383829:12387641:-1 gene:Zm00001d049008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Apyrase 1
Sequence

ATGGCTCGCGTCGCCGCCATGGTGGTGGTGATGGTGCTCCTCCAGCAGTTGGCCTCCTCG
TACTCGTACACCGTCGCGGCCCACGCCGATGCTGCTGGCGTGCTTGGCCGCAAGGCGGGC
GTCGTCGTCGACGAGACTCCGGTGGAGAAATCGCCGGCTGGGCCGGGGAGGTACGCAGTC
ATCTTCGACGCCGGCAGTACGGGGAGTCGGGTGTACATCTTCCGGTTCGGCAGGCAGATG
GACCTCCTCCGCATCGGCGACGAGATCGAATTTTTTGCCAAGTTGAAGCCAGGTCTGAGC
TCGTATGCTGGGCGACCCCAGGAGGCCGCAAAGTCCATTCTGCCTCTTCTCGAGAAGGCC
AAGAGCATTGTCCCCTCATGGCTTATGAAAAGAACCCCTGTTAAGCTTGGAGCGACTGCT
GGATTACGCCTTATCGGAAACCAACAAGCAGACCAAATCCTCGATGCGGTCAGAGACCTG
GTCCACAAGAAGAGCAAATTCCAGTACAAGCCCAACTGGATCAATGTTCTTGAGGGGTCT
CAGGAAGCATCCTACCTATGGGTCGCTCTGAATTACTTGCTGGATAAACTGGGAGGGGAG
TATTCCCAGACGGTAGGCGTGATTGATTTGGGTGGCGGGTCGGTGCAAATGGCGTACGCT
GTCTCCGCAAACGCTGCTGCGAGAGCTCCCGCGGTGCCTGACGGCGAGGATCCCTACATT
ACCAAGGAGTATTTTAAAGGGAAACAGTACAATGTATACGTTCACAGCTACTTGCGCTAT
GGTTCCTTTGCATCACGAGCGGAGATTCTGATGTCCAAGAACGGACCATTCAGCTCCTGC
ATGCTGCGCGGATTTAGTGGTAAATATACCTACAATGGACAGCAGTTCGATGCGACTGCT
AGACCAGAAGGAGCATTGTATGACAAATGCAGGGGAGAGATTGCCAAGGCGATGAATCTC
AAGGCACCATGCAAGACAGCAAAGAACTGCACCTTCTGTGGTGTGTGGAAAGGGGGAGGT
GGAGCTGGCCAAAACGACATCTACGTCGCGTCAGGTTTCTACTACCTTGCCTCACATGTT
GGGTTCATAGATAGCAAAGCTCCAAGCGCAAAGGCCCCTCCTGCCGCATTCAGGGCTGCG
GCTAAGAAGGCCTGCAAATTCGATGTCAACAGAGCAAAAGTGGCCTACCCAGATGTTTCT
AACAGTGATGTGCCGTACTTGTGTATGGATCTTACTTACACGTACACATTGCTCGTTGAC
GGCTTCGGTCTGCAGCCAATGAAAAAGATTACATTTGTATCCAAGGTGAAGCATGGCGAA
TACTACATCGAAGCCACATGGCCTTTGGGTACGGCTATTGAGGCCGTGTCACCGACAAGG
CAGATCGGAAACTAA

Peptide Sequence

PEP ID

Zm00001d049008_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:12383829:12387641:-1 gene:Zm00001d049008 transcript:Zm00001d049008_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Apyrase 1
Sequence

MARVAAMVVVMVLLQQLASSYSYTVAAHADAAGVLGRKAGVVVDETPVEKSPAGPGRYAV
IFDAGSTGSRVYIFRFGRQMDLLRIGDEIEFFAKLKPGLSSYAGRPQEAAKSILPLLEKA
KSIVPSWLMKRTPVKLGATAGLRLIGNQQADQILDAVRDLVHKKSKFQYKPNWINVLEGS
QEASYLWVALNYLLDKLGGEYSQTVGVIDLGGGSVQMAYAVSANAAARAPAVPDGEDPYI
TKEYFKGKQYNVYVHSYLRYGSFASRAEILMSKNGPFSSCMLRGFSGKYTYNGQQFDATA
RPEGALYDKCRGEIAKAMNLKAPCKTAKNCTFCGVWKGGGGAGQNDIYVASGFYYLASHV
GFIDSKAPSAKAPPAAFRAAAKKACKFDVNRAKVAYPDVSNSDVPYLCMDLTYTYTLLVD
GFGLQPMKKITFVSKVKHGEYYIEATWPLGTAIEAVSPTRQIGN

Transcript Sequence

Transcript ID

Zm00001d049008_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:12383829:12387641:-1 gene:Zm00001d049008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Apyrase 1
Sequence

CTCGTGGCTCGCTAGCTAGTGTGCCTCCGCATGCATCCAGTGCTGGCCAGCCGGTGAGCA
CTGCCGCTCGCCGCATCAGGTAGTAGGGCGCTAGCTAGCCATGGCTCGCGTCGCCGCCAT
GGTGGTGGTGATGGTGCTCCTCCAGCAGTTGGCCTCCTCGTACTCGTACACCGTCGCGGC
CCACGCCGATGCTGCTGGCGTGCTTGGCCGCAAGGCGGGCGTCGTCGTCGACGAGACTCC
GGTGGAGAAATCGCCGGCTGGGCCGGGGAGGTACGCAGTCATCTTCGACGCCGGCAGTAC
GGGGAGTCGGGTGTACATCTTCCGGTTCGGCAGGCAGATGGACCTCCTCCGCATCGGCGA
CGAGATCGAATTTTTTGCCAAGTTGAAGCCAGGTCTGAGCTCGTATGCTGGGCGACCCCA
GGAGGCCGCAAAGTCCATTCTGCCTCTTCTCGAGAAGGCCAAGAGCATTGTCCCCTCATG
GCTTATGAAAAGAACCCCTGTTAAGCTTGGAGCGACTGCTGGATTACGCCTTATCGGAAA
CCAACAAGCAGACCAAATCCTCGATGCGGTCAGAGACCTGGTCCACAAGAAGAGCAAATT
CCAGTACAAGCCCAACTGGATCAATGTTCTTGAGGGGTCTCAGGAAGCATCCTACCTATG
GGTCGCTCTGAATTACTTGCTGGATAAACTGGGAGGGGAGTATTCCCAGACGGTAGGCGT
GATTGATTTGGGTGGCGGGTCGGTGCAAATGGCGTACGCTGTCTCCGCAAACGCTGCTGC
GAGAGCTCCCGCGGTGCCTGACGGCGAGGATCCCTACATTACCAAGGAGTATTTTAAAGG
GAAACAGTACAATGTATACGTTCACAGCTACTTGCGCTATGGTTCCTTTGCATCACGAGC
GGAGATTCTGATGTCCAAGAACGGACCATTCAGCTCCTGCATGCTGCGCGGATTTAGTGG
TAAATATACCTACAATGGACAGCAGTTCGATGCGACTGCTAGACCAGAAGGAGCATTGTA
TGACAAATGCAGGGGAGAGATTGCCAAGGCGATGAATCTCAAGGCACCATGCAAGACAGC
AAAGAACTGCACCTTCTGTGGTGTGTGGAAAGGGGGAGGTGGAGCTGGCCAAAACGACAT
CTACGTCGCGTCAGGTTTCTACTACCTTGCCTCACATGTTGGGTTCATAGATAGCAAAGC
TCCAAGCGCAAAGGCCCCTCCTGCCGCATTCAGGGCTGCGGCTAAGAAGGCCTGCAAATT
CGATGTCAACAGAGCAAAAGTGGCCTACCCAGATGTTTCTAACAGTGATGTGCCGTACTT
GTGTATGGATCTTACTTACACGTACACATTGCTCGTTGACGGCTTCGGTCTGCAGCCAAT
GAAAAAGATTACATTTGTATCCAAGGTGAAGCATGGCGAATACTACATCGAAGCCACATG
GCCTTTGGGTACGGCTATTGAGGCCGTGTCACCGACAAGGCAGATCGGAAACTAATGGGC
TGCTGCTCGCACTGAACTGAACTCTGGATTTAGCGCATGTTATCATGGTTGCAGTTAGCG
CTCCTGACCTATAATATTTGACTCTCAAATAATTTCTGTACTGCTGCTCGGCAGCGTGCA
TGCAAACTGAGCATTTTCGAGTCAGCCTCTGCGTGTGTGCGGGCTAATTCAACTATGAAA
TTCATTCGAATTTCTTTCCACTTTCACTTTGGTATCTTCAGTGAATATGTAAATCTTTGA
TGTTCT