Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d049006_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:12307519:12308406:-1 gene:Zm00001d049006 gene_biotype:protein_coding transcript_biotype:protein_coding description:PHD finger protein ALFIN-LIKE 6
Sequence

ATGATTAATAACCTCCCTACAATATATGAAGTTGTCACGGGAACTGCCAAGAAGCAAACC
AAGGAGAAAACTCCGAAAAGCAGCAGCAAGAGCAATAAAGCTGGCCCAAAACCGCCACGC
CAGCCAGAACCCAACTCAAGGGGTTCGAAGATGCCACCTCCGAAGGATGAGGATGACAGC
GGAGGCGAGGAAGAGGAGGAAGAGGAAGATCACGAAAACACGCTGTGTGGTTCTTGTGGT
GACAACTACGGACAGGATGAGTTCTGGATATGCTGCGATGCGTGCGAGACTTGGTTCCAT
GGCAAGTGTGTCAAGATCACTCCTGCCAAGGCCGAACACATCAAGCACTACAAGTGTCCG
AACTGCAGCGGTAGTGGCAAGAGAGCCCGAGCATGA

Peptide Sequence

PEP ID

Zm00001d049006_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:12307519:12308406:-1 gene:Zm00001d049006 transcript:Zm00001d049006_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:PHD finger protein ALFIN-LIKE 6
Sequence

MINNLPTIYEVVTGTAKKQTKEKTPKSSSKSNKAGPKPPRQPEPNSRGSKMPPPKDEDDS
GGEEEEEEEDHENTLCGSCGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCP
NCSGSGKRARA

Transcript Sequence

Transcript ID

Zm00001d049006_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:12307519:12308406:-1 gene:Zm00001d049006 gene_biotype:protein_coding transcript_biotype:protein_coding description:PHD finger protein ALFIN-LIKE 6
Sequence

TTTTTTTTTGTGAAATTGCTGCAGGAAGCGCCTTTTTGTCATGATTAATAACCTCCCTAC
AATATATGAAGTTGTCACGGGAACTGCCAAGAAGCAAACCAAGGAGAAAACTCCGAAAAG
CAGCAGCAAGAGCAATAAAGCTGGCCCAAAACCGCCACGCCAGCCAGAACCCAACTCAAG
GGGTTCGAAGATGCCACCTCCGAAGGATGAGGATGACAGCGGAGGCGAGGAAGAGGAGGA
AGAGGAAGATCACGAAAACACGCTGTGTGGTTCTTGTGGTGACAACTACGGACAGGATGA
GTTCTGGATATGCTGCGATGCGTGCGAGACTTGGTTCCATGGCAAGTGTGTCAAGATCAC
TCCTGCCAAGGCCGAACACATCAAGCACTACAAGTGTCCGAACTGCAGCGGTAGTGGCAA
GAGAGCCCGAGCATGATGATGCTGGATATATCCATCTCTCATGCCTGACTTGATGTAAAA
CACCCACATGGGGACCGAATGCCCGATGGTTGTTGCTTTCAGTGTAGGACCAGCTGTAGG
GTCTTGATGTGCTGTTTGCTGTAGTATGTCAAAGACGTTCTAGATCTATTGTTAGTAACT
AGCAACTAATTGTAGTAGCCTGTATTTCTTCAATCTTCTCCCAGGGCGCCTGTGCTGAAC
TCAAACTGTTTTAGATCTAAGTTGTGCATTATGTATCACTCATGTTAGTTTGTTAAAAAA
TGTGTTAGCATTCGTATGAAACGCCAACCATGTTTACAAATTAATTAACTTCAAGTCTAT
TTTGC