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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048998_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:12010181:12012169:1 gene:Zm00001d048998 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein CP26 chloroplastic
Sequence

ATGGCGGCGCTCGCTCCATCCAAGATTCTGGGCACCCAGCTCAACTTCGCGGGCTCCTCC
CGCTACGCCACCGCAGCGCCCACCGCGGGGGCTCAGAAGATTGTCTCCCTTTTCAGCAAG
AAGCCTGCCCAGAAGCCCAAGCCCGCTGCGGTATCGTCGTCTTCTCCAGACATCAGCGAC
GAGCTCGCCAAGTGGTATGGTCCTGACAGGAGGATCTACCTGCCGGATGGGCTGTTGGAC
CGGTCGGAGGTGCCGGAGTACCTCACCGGAGAGGTCCCTGGAGACTATGGCTACGACCCT
TTTGGCCTGGGCAAGAAGCCAGAGGACTTCGCCAAGTACCAGGCCTACGAGCTGATCCAT
GCCAGATGGGCCATGCTCGGTGCCGCTGGCGCTGTCATCCCAGAGGCCTGCAACAAGTTC
GGCGCTAACTGTGGCCCTGAGGCTGTCTGGTTCAAGACCGGCGCGCTGCTCCTGGACGGC
AACACCCTCAACTACTTCGGCAACAGCATCCCCATCAACCTGGTGGTGGCCGTGATCGCG
GAGGTCATCCTCGTCGGCGGCGCCGAGTACTACCGGATCACCAACGGACTGGACCTTGAG
GACAAGCTGCACCCCGGTGGGCCCTTCGACCCCCTGGGCCTGGCCAGCGACCCCGACCAG
GCCGCCATCCTCAAGGTGAAGGAGATCAAGAACGGCCGGCTGGCCATGTTCTCCATGTTC
GCCTTCTTCATCCAGGCCTACGTCACCGGCGAAGGCCCCGTGGAGAACCTCGCCAAGCAC
CTCAGCGACCCCTTCGGCAACAACCTGCTCACCGTCATCTCCGGCGCCGCCGAGAGGACG
CCTAGCCTGTAA

Peptide Sequence

PEP ID

Zm00001d048998_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:12010181:12012169:1 gene:Zm00001d048998 transcript:Zm00001d048998_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein CP26 chloroplastic
Sequence

MAALAPSKILGTQLNFAGSSRYATAAPTAGAQKIVSLFSKKPAQKPKPAAVSSSSPDISD
ELAKWYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGLGKKPEDFAKYQAYELIH
ARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVVAVIA
EVILVGGAEYYRITNGLDLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSMF
AFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGAAERTPSL

Transcript Sequence

Transcript ID

Zm00001d048998_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:12010181:12012169:1 gene:Zm00001d048998 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein CP26 chloroplastic
Sequence

CCCATCAGCCATCCCCTTTTGCTGCAAATCTTTCTCTGAATTGTGGGTCTCCGACAATGG
CGGCGCTCGCTCCATCCAAGATTCTGGGCACCCAGCTCAACTTCGCGGGCTCCTCCCGCT
ACGCCACCGCAGCGCCCACCGCGGGGGCTCAGAAGATTGTCTCCCTTTTCAGCAAGAAGC
CTGCCCAGAAGCCCAAGCCCGCTGCGGTATCGTCGTCTTCTCCAGACATCAGCGACGAGC
TCGCCAAGTGGTATGGTCCTGACAGGAGGATCTACCTGCCGGATGGGCTGTTGGACCGGT
CGGAGGTGCCGGAGTACCTCACCGGAGAGGTCCCTGGAGACTATGGCTACGACCCTTTTG
GCCTGGGCAAGAAGCCAGAGGACTTCGCCAAGTACCAGGCCTACGAGCTGATCCATGCCA
GATGGGCCATGCTCGGTGCCGCTGGCGCTGTCATCCCAGAGGCCTGCAACAAGTTCGGCG
CTAACTGTGGCCCTGAGGCTGTCTGGTTCAAGACCGGCGCGCTGCTCCTGGACGGCAACA
CCCTCAACTACTTCGGCAACAGCATCCCCATCAACCTGGTGGTGGCCGTGATCGCGGAGG
TCATCCTCGTCGGCGGCGCCGAGTACTACCGGATCACCAACGGACTGGACCTTGAGGACA
AGCTGCACCCCGGTGGGCCCTTCGACCCCCTGGGCCTGGCCAGCGACCCCGACCAGGCCG
CCATCCTCAAGGTGAAGGAGATCAAGAACGGCCGGCTGGCCATGTTCTCCATGTTCGCCT
TCTTCATCCAGGCCTACGTCACCGGCGAAGGCCCCGTGGAGAACCTCGCCAAGCACCTCA
GCGACCCCTTCGGCAACAACCTGCTCACCGTCATCTCCGGCGCCGCCGAGAGGACGCCTA
GCCTGTAAGGACGGACGCCACGCCGCCGAGCAATGCCAAGTCATGCGCTGCTGCATGCCG
TCTTTGATTTTACCGGGATAAAAAGCTGTATGTGAGGGTCTGAAGAATGTGCAATGCCCA
CGCGTGTAAATTATCGAGAGGGGGAACAAACCTTTTCATTCTGATTGTGATATGACTGCT
GCTTCCATTGGTGCCTGAGACATGCTACTTACTTAAGTTAATTTGTGTTTTAGGATCAGT
TTGGTACATCTCTCATTTCTAATTCT