Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048969_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:4:11098504:11103117:-1 gene:Zm00001d048969 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 28 description:PHD finger protein

Sequence

ATGGCCGTGATAAACGGGCGCTCGAAGCGTGTTCGGGTGACGGCGGTGCCGCGCCCTCTG
GAGCTGCGGTCGTTCCCGGCCGCCGGAGAGGGGCCGCGCCCGCTGGTCCTGCTGTCGTTC
CCGGCCGCCGGAGAGGGGCTGCCGCCGCGTGGTGCGTTTCGCGACTGTGTACGGTCGTTC
CTGGCTGGATCCGCGGTGCCGGCGGACGGCGCGTGGCAGGTAGCCTTTGGAGTCGGGAAC
GGGGTGGTCGTGGTGATGGAGGTGGTGGAAGAGGACGTCGCTAAAACTGGGATCGAGCGG
ATCTACTGCGATCACTGTACCGTCGCCGAGCTGTTTTTTCATATCAGTGGACTATTAAAA
CCAGTAGGGGTGGAGGGACACATGCCAATCGGTAAGCAAATTCTATCAAACGAGATGATG
ATTGTTATGGCCGGAGAATCTCAATACCATCGCCTTTTCTTTTACAATTTAATAGGCTGG
AGTAGACACCCTGTTTGTGGAAGGAGGTACCATTTCATAATTCGGAATGAATACAAAACC
TGCAAGCATTGTGACCATTGTGGTCTTATGGCCCAGTCGTTTGGAACACGGTGCCCGACA
TGCAAATATGTGATCTCCTCTGATGATCCGGAAGATTGGGACTATAGGCAGTTGGATAAT
CCACGTCACTTGCTGCATGGTATTGTACATGACAATGGGTTTGGTCACCTTGTTCGGATA
AATGGCAGAGAGGGTGGCTCTAGTCTTCTGACGGGGATTCAACTGATGGGTTTCTGGGAT
TGGCTCTGCAGATACCTTAGAGTCAGAAAGGTCTCCTTGATGGATGTCTCTAAGAAGTAT
GAAACAGATTACCGGATCTTACATGCCATCACTACTGGTCATTCATGGTATGGCCAATGG
GGATTCAAACTCAACAAAGGGAGCTTTGGAATTACATCAGAAGAATACTTAAAAGCTATG
GACAACCTTTCCTTAACTCCATTATCACACTTCTTCCCGCACTCCCGATATCCTCGAAAC
CAGCTACAAGATACCATTTCATTCTACCGATCTCTTTCAAAGCAACCTCTCACCACAATT
CGTGAACTGTTCCTCTATGTGCTGGGCCTTGCCACCAGCAAGAGTTCAAATATGCACTAT
GGATCAATGCATAAGGAGCACTCACATACCCATGTGCAAGACACATGGCCTGACGAGGAA
ATAAAACGTGCAACAGAAATTGCTATAAAGGTTCTTCGTGCTGTTGAGAAAACAAGGTGG
GTGACCATGCGAATCCTAAAGGCAGCCATGTACCATTCAATTGGTTCACCGCAGCTAGTG
GACTACTGCCTCAAGACCCTTGGTACTAGAACAATTGATGGAATGATGGTTGCAGTTCGA
TGCAACAGCGATACTAACACCCTAGAGTACAGGCTTATGGATGAACCCATCGTTCTGCCC
AATGTATCCATGCCAACTCAAGACCATCTTCGCCGTGACATAAAGTTCTTGCATGATGCT
CTCCTCCACCCACATACAATGCATCCATACAAACCGGAAAACTGTTATGAGCATGGCAAG
AGGTCTGCCATGGTCCTTTTGGACTGCAAGCAATTCACAAAGCACTATGACCTGGAACAG
GAGTTCTTGCCTCAAAACCCATCCATGTTGCACCTGTGGTGTCAAGTAGAGGTGTTAGAC
CAGGTTGGCGATCCACCTTGCATACCACCAGAGCTCCTAACTCTTCCGCAGACAGCAACT
GTGTCTGATCTGAAGGTGGAGGCAACCAGAACATTCCGTGGCATCTATCTAATGTTGCAT
TCCTTTGTAGCCGATCGGCTTGTTGACTGTGGAACGGCAAGTGAGTCAACTCAACTAAAG
CTCTTGTTTGGGGCAAATGGAACTGTTCGCGTCCAAGGCAGGTGTGCCAGTGGTGAACGC
AGGGTTGGGATTTACCGGATGGAGAGAGGCGTGGATAAATGGACAGTGCGTTGCTCTTGT
GGAGCCAAGGATGATGATGGTGAGAGGATGCTGTCTTGTGACTCTTGCCATGTGTGGCAG
CACACTAGGTGTGTTGGGATTAGTGATTTCGATCAGGTGCCCAAGAAATATGTATGTAAC
TCATGTAAATTACTTAACAAGCGTAAGAGCAGAGGTCACGGACCAGTTTATAACATTGGC
CCAAGCAAAAGATTCAAGATTGGCGCAGGTGGCTTTAGCTCTAGGTGGGGGATTTTTTTG
AGGCCTCCAGCTGACATGTAA

Peptide Sequence

PEP ID

Zm00001d048969_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:4:11098504:11103117:-1 gene:Zm00001d048969 transcript:Zm00001d048969_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 28 description:PHD finger protein

Sequence

MAVINGRSKRVRVTAVPRPLELRSFPAAGEGPRPLVLLSFPAAGEGLPPRGAFRDCVRSF
LAGSAVPADGAWQVAFGVGNGVVVVMEVVEEDVAKTGIERIYCDHCTVAELFFHISGLLK
PVGVEGHMPIGKQILSNEMMIVMAGESQYHRLFFYNLIGWSRHPVCGRRYHFIIRNEYKT
CKHCDHCGLMAQSFGTRCPTCKYVISSDDPEDWDYRQLDNPRHLLHGIVHDNGFGHLVRI
NGREGGSSLLTGIQLMGFWDWLCRYLRVRKVSLMDVSKKYETDYRILHAITTGHSWYGQW
GFKLNKGSFGITSEEYLKAMDNLSLTPLSHFFPHSRYPRNQLQDTISFYRSLSKQPLTTI
RELFLYVLGLATSKSSNMHYGSMHKEHSHTHVQDTWPDEEIKRATEIAIKVLRAVEKTRW
VTMRILKAAMYHSIGSPQLVDYCLKTLGTRTIDGMMVAVRCNSDTNTLEYRLMDEPIVLP
NVSMPTQDHLRRDIKFLHDALLHPHTMHPYKPENCYEHGKRSAMVLLDCKQFTKHYDLEQ
EFLPQNPSMLHLWCQVEVLDQVGDPPCIPPELLTLPQTATVSDLKVEATRTFRGIYLMLH
SFVADRLVDCGTASESTQLKLLFGANGTVRVQGRCASGERRVGIYRMERGVDKWTVRCSC
GAKDDDGERMLSCDSCHVWQHTRCVGISDFDQVPKKYVCNSCKLLNKRKSRGHGPVYNIG
PSKRFKIGAGGFSSRWGIFLRPPADM

Transcript Sequence

Transcript ID

Zm00001d048969_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:11098504:11103117:-1 gene:Zm00001d048969 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 28 description:PHD finger protein

Sequence

CTTCTGCCGCTCAAAATTCCAAATCGTCCTGACTACCCGCGCTTCCCATAATCCTATCCC
GCCCGCGCGGCCCCTCTCGGGATTCAAACGCCAGCCGTTTGTCCTCTCAAACCCGATCGG
ATCTGACCGCCCTCCCAGGCCGTAACAGGATCCCGTCGGTCATGGCCGTGATAAACGGGC
GCTCGAAGCGTGTTCGGGTGACGGCGGTGCCGCGCCCTCTGGAGCTGCGGTCGTTCCCGG
CCGCCGGAGAGGGGCCGCGCCCGCTGGTCCTGCTGTCGTTCCCGGCCGCCGGAGAGGGGC
TGCCGCCGCGTGGTGCGTTTCGCGACTGTGTACGGTCGTTCCTGGCTGGATCCGCGGTGC
CGGCGGACGGCGCGTGGCAGGTAGCCTTTGGAGTCGGGAACGGGGTGGTCGTGGTGATGG
AGGTGGTGGAAGAGGACGTCGCTAAAACTGGGATCGAGCGGATCTACTGCGATCACTGTA
CCGTCGCCGAGCTGTTTTTTCATATCAGTGGACTATTAAAACCAGTAGGGGTGGAGGGAC
ACATGCCAATCGGTAAGCAAATTCTATCAAACGAGATGATGATTGTTATGGCCGGAGAAT
CTCAATACCATCGCCTTTTCTTTTACAATTTAATAGGCTGGAGTAGACACCCTGTTTGTG
GAAGGAGGTACCATTTCATAATTCGGAATGAATACAAAACCTGCAAGCATTGTGACCATT
GTGGTCTTATGGCCCAGTCGTTTGGAACACGGTGCCCGACATGCAAATATGTGATCTCCT
CTGATGATCCGGAAGATTGGGACTATAGGCAGTTGGATAATCCACGTCACTTGCTGCATG
GTATTGTACATGACAATGGGTTTGGTCACCTTGTTCGGATAAATGGCAGAGAGGGTGGCT
CTAGTCTTCTGACGGGGATTCAACTGATGGGTTTCTGGGATTGGCTCTGCAGATACCTTA
GAGTCAGAAAGGTCTCCTTGATGGATGTCTCTAAGAAGTATGAAACAGATTACCGGATCT
TACATGCCATCACTACTGGTCATTCATGGTATGGCCAATGGGGATTCAAACTCAACAAAG
GGAGCTTTGGAATTACATCAGAAGAATACTTAAAAGCTATGGACAACCTTTCCTTAACTC
CATTATCACACTTCTTCCCGCACTCCCGATATCCTCGAAACCAGCTACAAGATACCATTT
CATTCTACCGATCTCTTTCAAAGCAACCTCTCACCACAATTCGTGAACTGTTCCTCTATG
TGCTGGGCCTTGCCACCAGCAAGAGTTCAAATATGCACTATGGATCAATGCATAAGGAGC
ACTCACATACCCATGTGCAAGACACATGGCCTGACGAGGAAATAAAACGTGCAACAGAAA
TTGCTATAAAGGTTCTTCGTGCTGTTGAGAAAACAAGGTGGGTGACCATGCGAATCCTAA
AGGCAGCCATGTACCATTCAATTGGTTCACCGCAGCTAGTGGACTACTGCCTCAAGACCC
TTGGTACTAGAACAATTGATGGAATGATGGTTGCAGTTCGATGCAACAGCGATACTAACA
CCCTAGAGTACAGGCTTATGGATGAACCCATCGTTCTGCCCAATGTATCCATGCCAACTC
AAGACCATCTTCGCCGTGACATAAAGTTCTTGCATGATGCTCTCCTCCACCCACATACAA
TGCATCCATACAAACCGGAAAACTGTTATGAGCATGGCAAGAGGTCTGCCATGGTCCTTT
TGGACTGCAAGCAATTCACAAAGCACTATGACCTGGAACAGGAGTTCTTGCCTCAAAACC
CATCCATGTTGCACCTGTGGTGTCAAGTAGAGGTGTTAGACCAGGTTGGCGATCCACCTT
GCATACCACCAGAGCTCCTAACTCTTCCGCAGACAGCAACTGTGTCTGATCTGAAGGTGG
AGGCAACCAGAACATTCCGTGGCATCTATCTAATGTTGCATTCCTTTGTAGCCGATCGGC
TTGTTGACTGTGGAACGGCAAGTGAGTCAACTCAACTAAAGCTCTTGTTTGGGGCAAATG
GAACTGTTCGCGTCCAAGGCAGGTGTGCCAGTGGTGAACGCAGGGTTGGGATTTACCGGA
TGGAGAGAGGCGTGGATAAATGGACAGTGCGTTGCTCTTGTGGAGCCAAGGATGATGATG
GTGAGAGGATGCTGTCTTGTGACTCTTGCCATGTGTGGCAGCACACTAGGTGTGTTGGGA
TTAGTGATTTCGATCAGGTGCCCAAGAAATATGTATGTAACTCATGTAAATTACTTAACA
AGCGTAAGAGCAGAGGTCACGGACCAGTTTATAACATTGGCCCAAGCAAAAGATTCAAGA
TTGGCGCAGGTGGCTTTAGCTCTAGGTGGGGGATTTTTTTGAGGCCTCCAGCTGACATGT
AAATATCAATAAAATGACAGTGAGTTTGTATGAGATACCGGTTTGTGGATGTTAACTTGT
AGAGTGCTTGGTTTGAGTAATAAGCTAGTCCATCATCTT