Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048926_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:4:8239757:8246444:-1 gene:Zm00001d048926 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGACGGAGCAGCTCCTTCCGATCGCGATCCACCGGGTGCTCGAAGCCGGCATGCAG
CTCGGCGCGGCGGAGGGGCGCAAGCAGGCCAAGGGCATCGCCGAGGTGTTCCCCGACCTG
GGGCGCGCGCAGTACCTCGCGGCGTACATGGACCTGGAGTTCGTGCGCAGCCTCGACGCG
GCCATCGACAAGCGCCTGTTCCTGCGCCGCACCCTCGTCATCACCGAGCGAGTGGCGCGG
GACTACCCCAAATCGCCCGTGTTCGCCTCCTTCCACGCCAAGCTCCTCTTCGTCCTGGGT
GAGTACGACGCAGCCGAGACGGAGTGCCGCCGCGCGCTGGAAATGGTGGAGCCCAATGAC
CCGCAAGACGACTGCATCCCGGTTGGGTCAATCAGCGGGGAAAACCGTGGCGTCAGGCTG
GTTTCGGTGGCCTGCGAGTTCCACGAGCTGATCAACAAGATCGTGATGCTGGCCAGCGAT
TACTGGGACTCCATGAGCAGTGAGAGGCAGCGTCACAGCTTCCTACAGGTCAGGCTCGAT
GTGCTGCAGCATGAGTACAACAAGGTTGATCCGTCGCATGCGTTCGCTATGTCTGATGTG
CGGAGCTTTGTCAAGGAGCACGAGTCTTGGAGGTTCTGGATTTGCCCCCTTTGTCATTGC
AAGAAGTTCATGTACACTGGTTTGCTATTGTCACACATGTGCACCAGGCACCCAAGGGCA
GTCCTGCCACGACTTCAGTCAGTATTGGATCAGAAACTCAGTGATGAAGCATTGGAGAGT
GACGATTCTCTGCATGCGGTGACATTTTGTGAAGATTCAGAACAGCAAGACGTGACGATT
TGCTTCAACAAGAGCAGCGAGGTATTCAAATGGTTGTTCTATGCACCTTCAAGTGGAGTA
CGGCCAAAGCCATTCCTTGAAATACGACAAATGAAGTGTGATAAAGGACGTATGCTGCTT
GAAAGCATAAAGGACAAAATGAAGACTCTACCTGCAGATAGATCTAGTACTGAGTTCGCC
AAGGCTATTCCTGAAATCGAGGAGCAGTGGCAGAATTTTCTCAAATGTTCTGTGTTGGAC
TACAGAGAAGTCATTCTCCAACTTGCAAGATCATTCCTATGGAGAGATTTAAAGAAATGC
ATGACTGAGGATCCAGAACTTGCTGCTAAGCCGATTAGTGCCGCTGATATTGATGCCATA
TTCACTAAAGAAGTTGTTAATCCTGCCAGCAATGCTGTAGAGTCTTCTCAAACAGTGGGG
GCTCAAATGGTCAGTGGAAATTGTCAAGAAAGTGTTCACGACGAAGGGGACAGCTCTGAC
AACCATGGAAAGAATACAGAATCGTCAGATCAGACAACTGATATGGTGGAACGTGAGACT
GGCCTTGCTGCAAAACTGGATAAGTTGGAGAATGGTCCAAAGATCAGTGAGAGTAATCCG
GAAGGTAATGTTCACGACAAATGGGAGAGTTCTAACAACCACGGAAAGATTACAGAATCA
TCACATCAGGCAATCGGTATGGTGGAAAGTGAGACTGACCTTGCTGCAAAATCAGTAATG
ACATTCTGTAATGTTCACGACGAAGAGGAGAGTTGTGACAACCAGGGAAAGAATACAGAA
TCATCAGATCAGGCCATTTGTATGGTGGAAAGTGAGACCGACCTTGCTACAAAACTGAAT
AAGTTGGAGATTGATCCAAAGATCAGTGAGAGTAACCAGGAAAGTAATGTTCACGACAAT
GGGGAGAGTTCTGGCAACCAGGGAAAGAATACAAAATCACTAGATCAGGCAATCGGTATG
GCGGAAAGTGAGACCGACCTTGCGGGAAAACTAGATAAGTTGGGGACTGATCCAAAGATC
AGTGAGAGTAACCAGGAAAGTGAGTTACACGCTGAACATGAGAGTTCTGATTCCCCAGTA
AGCAGGAGTGACGTGGCACTAAGCTCGAAGGGGACTTCTGAGGCCACGGTTACCGACACA
AAGTTGCCACGGTTACCTACCAACACGATGGAGGGAGTGAGTGACTTTGACACAAACCTC
TTGGCATATACGCTTGGCTCCATCTAG

Peptide Sequence

PEP ID

Zm00001d048926_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:4:8239757:8246444:-1 gene:Zm00001d048926 transcript:Zm00001d048926_T004 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKTEQLLPIAIHRVLEAGMQLGAAEGRKQAKGIAEVFPDLGRAQYLAAYMDLEFVRSLDA
AIDKRLFLRRTLVITERVARDYPKSPVFASFHAKLLFVLGEYDAAETECRRALEMVEPND
PQDDCIPVGSISGENRGVRLVSVACEFHELINKIVMLASDYWDSMSSERQRHSFLQVRLD
VLQHEYNKVDPSHAFAMSDVRSFVKEHESWRFWICPLCHCKKFMYTGLLLSHMCTRHPRA
VLPRLQSVLDQKLSDEALESDDSLHAVTFCEDSEQQDVTICFNKSSEVFKWLFYAPSSGV
RPKPFLEIRQMKCDKGRMLLESIKDKMKTLPADRSSTEFAKAIPEIEEQWQNFLKCSVLD
YREVILQLARSFLWRDLKKCMTEDPELAAKPISAADIDAIFTKEVVNPASNAVESSQTVG
AQMVSGNCQESVHDEGDSSDNHGKNTESSDQTTDMVERETGLAAKLDKLENGPKISESNP
EGNVHDKWESSNNHGKITESSHQAIGMVESETDLAAKSVMTFCNVHDEEESCDNQGKNTE
SSDQAICMVESETDLATKLNKLEIDPKISESNQESNVHDNGESSGNQGKNTKSLDQAIGM
AESETDLAGKLDKLGTDPKISESNQESELHAEHESSDSPVSRSDVALSSKGTSEATVTDT
KLPRLPTNTMEGVSDFDTNLLAYTLGSI

Transcript Sequence

Transcript ID

Zm00001d048926_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:8239757:8246444:-1 gene:Zm00001d048926 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGTGGAGGAGGTCAGGGCGCGGGCCCGCGCCTCCTACAGCCGCATGAAGACGGAGCAGC
TCCTTCCGATCGCGATCCACCGGGTGCTCGAAGCCGGCATGCAGCTCGGCGCGGCGGAGG
GGCGCAAGCAGGCCAAGGGCATCGCCGAGGTGTTCCCCGACCTGGGGCGCGCGCAGTACC
TCGCGGCGTACATGGACCTGGAGTTCGTGCGCAGCCTCGACGCGGCCATCGACAAGCGCC
TGTTCCTGCGCCGCACCCTCGTCATCACCGAGCGAGTGGCGCGGGACTACCCCAAATCGC
CCGTGTTCGCCTCCTTCCACGCCAAGCTCCTCTTCGTCCTGGGTGAGTACGACGCAGCCG
AGACGGAGTGCCGCCGCGCGCTGGAAATGGTGGAGCCCAATGACCCGCAAGACGACTGCA
TCCCGGTTGGGTCAATCAGCGGGGAAAACCGTGGCGTCAGGCTGGTTTCGGTGGCCTGCG
AGTTCCACGAGCTGATCAACAAGATCGTGATGCTGGCCAGCGATTACTGGGACTCCATGA
GCAGTGAGAGGCAGCGTCACAGCTTCCTACAGGTCAGGCTCGATGTGCTGCAGCATGAGT
ACAACAAGGTTGATCCGTCGCATGCGTTCGCTATGTCTGATGTGCGGAGCTTTGTCAAGG
AGCACGAGTCTTGGAGGTTCTGGATTTGCCCCCTTTGTCATTGCAAGAAGTTCATGTACA
CTGGTTTGCTATTGTCACACATGTGCACCAGGCACCCAAGGGCAGTCCTGCCACGACTTC
AGTCAGTATTGGATCAGAAACTCAGTGATGAAGCATTGGAGAGTGACGATTCTCTGCATG
CGGTGACATTTTGTGAAGATTCAGAACAGCAAGACGTGACGATTTGCTTCAACAAGAGCA
GCGAGGTATTCAAATGGTTGTTCTATGCACCTTCAAGTGGAGTACGGCCAAAGCCATTCC
TTGAAATACGACAAATGAAGTGTGATAAAGGACGTATGCTGCTTGAAAGCATAAAGGACA
AAATGAAGACTCTACCTGCAGATAGATCTAGTACTGAGTTCGCCAAGGCTATTCCTGAAA
TCGAGGAGCAGTGGCAGAATTTTCTCAAATGTTCTGTGTTGGACTACAGAGAAGTCATTC
TCCAACTTGCAAGATCATTCCTATGGAGAGATTTAAAGAAATGCATGACTGAGGATCCAG
AACTTGCTGCTAAGCCGATTAGTGCCGCTGATATTGATGCCATATTCACTAAAGAAGTTG
TTAATCCTGCCAGCAATGCTGTAGAGTCTTCTCAAACAGTGGGGGCTCAAATGGTCAGTG
GAAATTGTCAAGAAAGTGTTCACGACGAAGGGGACAGCTCTGACAACCATGGAAAGAATA
CAGAATCGTCAGATCAGACAACTGATATGGTGGAACGTGAGACTGGCCTTGCTGCAAAAC
TGGATAAGTTGGAGAATGGTCCAAAGATCAGTGAGAGTAATCCGGAAGGTAATGTTCACG
ACAAATGGGAGAGTTCTAACAACCACGGAAAGATTACAGAATCATCACATCAGGCAATCG
GTATGGTGGAAAGTGAGACTGACCTTGCTGCAAAATCAGTAATGACATTCTGTAATGTTC
ACGACGAAGAGGAGAGTTGTGACAACCAGGGAAAGAATACAGAATCATCAGATCAGGCCA
TTTGTATGGTGGAAAGTGAGACCGACCTTGCTACAAAACTGAATAAGTTGGAGATTGATC
CAAAGATCAGTGAGAGTAACCAGGAAAGTAATGTTCACGACAATGGGGAGAGTTCTGGCA
ACCAGGGAAAGAATACAAAATCACTAGATCAGGCAATCGGTATGGCGGAAAGTGAGACCG
ACCTTGCGGGAAAACTAGATAAGTTGGGGACTGATCCAAAGATCAGTGAGAGTAACCAGG
AAAGTGAGTTACACGCTGAACATGAGAGTTCTGATTCCCCAGTAAGCAGGAGTGACGTGG
CACTAAGCTCGAAGGGGACTTCTGAGGCCACGGTTACCGACACAAAGTTGCCACGGTTAC
CTACCAACACGATGGAGGGAGTGAGTGACTTTGACACAAACCTCTTGGCATATACGCTTG
GCTCCATCTAGCTTGTGAGAAATTGTATTACAAACACTAGGAAGTTCATACTCCCTCTAA
CGATGTGCAGAAGAAACAAAAACAATACACCGTGGTGGCTAATAAAAAGTCTAAAACTGT
TGAG