Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048891_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:4:7214767:7220280:-1 gene:Zm00001d048891 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAT transposon superfamily isoform 2
Sequence	ATGGGTTCTTCTCCTTCCAAAGCCACTGGAGAGGATGCCCTGGTTCTGTGCAAGGATCGG ATGCGCCACATCAGACAAGCTATTGACTCGAGAGATGCACTGTCAGCAGCGCACTTATCT TACACACAATCTCTCCGTAGTGTGGGTACTGCACTGCGGCAGTATGCTGAGTCTGAGATC TCACCGGAATCATCGCTCTCCATTTCAGAAGTGGATAAGTCACCATCACATTCCTCTATG GCATCTCCTTCGCCTTCGCGTGCAGTAGAGAGTGTTGCCTCTCTGGGGCATCGAGCAAGT CCATCTATTACTCCACCCTCAACACGAATCCATTGCATGAAAGCAGCAGCAACCACTCCT TTGACCTTTGTGATAGATCAATCTACTGCTGAATTTGTGGGGCGCGAATCCCCAGTATCA GCTTTTGTCCCACCCCCACCACCATTGCCTCCAGAATTATGTACCACGTGGGACTTCTTT GATCCCATTGATGCTGCTGGTACCTCTTCCTCCAACAATGAGAATGAGGTAACCCTGAAC TTCAGTAGATTGAGGGATCTAAGAGAGTCAAGGGTAGCTGAAGTAGTTCCATTGAAAGAA GTTGAAGAGGAAATCATGTCCAGAAGGCATACAGAAATTTCTGATGATAATACACCACCT GAGCAGGAAAGAGAGCCAAAGCAAGGTGGGACCGGAAAACCAAGTCAGTTGGTGGATACT TCAACCAAAGCTACATCTGAGCAGGTTGCTGCAAAGTTGGAGGAAAGTGAAATGGAAAAA GAATTATGTGCAGAGGCAGAGGACCCTTCAGAGTTCATCACTCATCGAGCCAAAGATTTT GTGTCGAGCATGAAGGACATTGAAACCCGGTTTATGCGTGCAGCTGAAGCAGGAAATGAG GTTTCCAGAATGCTTGAAACCAAGAAGATCCGACTTGACATATGTGCTAAAATACCAGGT TCTCCAGTCAAGCTACCTTCTGCCCGATTTGTGTCAGCACTTCGAGTGTGCTGCAATCGT GATGTTATTCTCAACCAGGAAACTGCGCAGCATGTTTCAAAGGTTGTCACATGGAAGCGT TCTGTCTCATCTCTTTCATCATCATCTAAGAGTGCACTTATGACATCGATAATGAAAGAT GATGTGGATGACAGTAATAGTGATTTTGTTGAGGAATTCGCCATGGTATCCGGAAGCCAT TCTTCTACGTTGGACAGGCTACACGCATGGGAGAGAAAACTATATGATGAAATCAAGGTA TATCATAAATAA

Peptide Sequence

PEP ID	Zm00001d048891_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:4:7214767:7220280:-1 gene:Zm00001d048891 transcript:Zm00001d048891_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAT transposon superfamily isoform 2
Sequence	MGSSPSKATGEDALVLCKDRMRHIRQAIDSRDALSAAHLSYTQSLRSVGTALRQYAESEI SPESSLSISEVDKSPSHSSMASPSPSRAVESVASLGHRASPSITPPSTRIHCMKAAATTP LTFVIDQSTAEFVGRESPVSAFVPPPPPLPPELCTTWDFFDPIDAAGTSSSNNENEVTLN FSRLRDLRESRVAEVVPLKEVEEEIMSRRHTEISDDNTPPEQEREPKQGGTGKPSQLVDT STKATSEQVAAKLEESEMEKELCAEAEDPSEFITHRAKDFVSSMKDIETRFMRAAEAGNE VSRMLETKKIRLDICAKIPGSPVKLPSARFVSALRVCCNRDVILNQETAQHVSKVVTWKR SVSSLSSSSKSALMTSIMKDDVDDSNSDFVEEFAMVSGSHSSTLDRLHAWERKLYDEIKV YHK

Transcript Sequence

Transcript ID	Zm00001d048891_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:7214767:7220280:-1 gene:Zm00001d048891 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAT transposon superfamily isoform 2
Sequence	GCCACTCTGCGCATGTGACCGAGCAACCCACTGCCGCCCGGGATCGAGCCGCCGCATTGC CGCGTCCCTTCTGGAGCCGCCGCCGCCCACGGGGGTACCGGATCTGAGGAGCAAAGGCCA TTACTTATCGTAAGCAAGATTTCTAATTGGCGGAAGCTTTTATGTGTAGCTGACTGTTGA ATTTACTGGTCTCAAGTATAGAGTAGGCAGGCAATCTGCAGTTTAGTGGAACCCAATGGG TTCTTCTCCTTCCAAAGCCACTGGAGAGGATGCCCTGGTTCTGTGCAAGGATCGGATGCG CCACATCAGACAAGCTATTGACTCGAGAGATGCACTGTCAGCAGCGCACTTATCTTACAC ACAATCTCTCCGTAGTGTGGGTACTGCACTGCGGCAGTATGCTGAGTCTGAGATCTCACC GGAATCATCGCTCTCCATTTCAGAAGTGGATAAGTCACCATCACATTCCTCTATGGCATC TCCTTCGCCTTCGCGTGCAGTAGAGAGTGTTGCCTCTCTGGGGCATCGAGCAAGTCCATC TATTACTCCACCCTCAACACGAATCCATTGCATGAAAGCAGCAGCAACCACTCCTTTGAC CTTTGTGATAGATCAATCTACTGCTGAATTTGTGGGGCGCGAATCCCCAGTATCAGCTTT TGTCCCACCCCCACCACCATTGCCTCCAGAATTATGTACCACGTGGGACTTCTTTGATCC CATTGATGCTGCTGGTACCTCTTCCTCCAACAATGAGAATGAGGTAACCCTGAACTTCAG TAGATTGAGGGATCTAAGAGAGTCAAGGGTAGCTGAAGTAGTTCCATTGAAAGAAGTTGA AGAGGAAATCATGTCCAGAAGGCATACAGAAATTTCTGATGATAATACACCACCTGAGCA GGAAAGAGAGCCAAAGCAAGGTGGGACCGGAAAACCAAGTCAGTTGGTGGATACTTCAAC CAAAGCTACATCTGAGCAGGTTGCTGCAAAGTTGGAGGAAAGTGAAATGGAAAAAGAATT ATGTGCAGAGGCAGAGGACCCTTCAGAGTTCATCACTCATCGAGCCAAAGATTTTGTGTC GAGCATGAAGGACATTGAAACCCGGTTTATGCGTGCAGCTGAAGCAGGAAATGAGGTTTC CAGAATGCTTGAAACCAAGAAGATCCGACTTGACATATGTGCTAAAATACCAGGTTCTCC AGTCAAGCTACCTTCTGCCCGATTTGTGTCAGCACTTCGAGTGTGCTGCAATCGTGATGT TATTCTCAACCAGGAAACTGCGCAGCATGTTTCAAAGGTTGTCACATGGAAGCGTTCTGT CTCATCTCTTTCATCATCATCTAAGAGTGCACTTATGACATCGATAATGAAAGATGATGT GGATGACAGTAATAGTGATTTTGTTGAGGAATTCGCCATGGTATCCGGAAGCCATTCTTC TACGTTGGACAGGCTACACGCATGGGAGAGAAAACTATATGATGAAATCAAGGTATATCA TAAATAAATATGCAGAGCAAGCTCAAACCTTTTGCTAGTCTCGTGGATACCTCTACATGG AATGCCTGTTCTTTTATAGATGTCAAGTAAAAACTGGTGTGTTTAATCTTGAAGCGCTCA TGACTTTATTTTTGAGATAAGTGGTACATTGTCACAATGGTTGATAAATGAGAACATGTA ATACATGATCTTTATTAATATTGCATTTTTTAATCTAATTGTTCAATTGTAGTTTGTAGA TTGTTTATTTTGTGCTAAATACATAACTTTTGCTATGCTCTTAAATATATGTATCTAGAA AAGCTAAAACGTCTTATAATTTGAAAAGGAGGGAGTAGCAAATAAACTATGGTGTAGGCT ATGACTATGAGGTGTTTGGACACTTGATGGCATATCGAATAATTGTCACCAGGGGCGGAT CTGCACCCGGGGCTGCCCGGGATGCAGCCCCAGTCGCGGCAACAACCTCTCCTAAGCACG TCATCCGCACCTACGCGTCTGTCACCGTCCGGCGTCCGCTAGGATGGATAAATTCTGTTG CATGGTCATTTTGTTTCATCAATCGTGCCTAGACCTGTTGGCTAGCGTTCATCAATTAAC TGTTGCGTTCATCATTTTTTATGGTCTGTTTCATCAATTATTTATTAGGTTTGTTGACAA AATTATTTTTTATACTTTTAGGGATAGGATGGATAGTTTTCTTATCAAAAAAAAATTTTT AACACAACACTTGGGACTAATGAGAGCCGTGTAGAGCAAAATTTCTCCTTTTGCATACTC TTGCTTTTCATGGACATAATAAATTATATCATTTAGCTTTATCTTAGTTCAGTCTAAAAA AATTTAGCGTCCCCTTTAATCCATTCCTGAATCTGCCGCTGATTGTCACTGCCTTAACGC CTTGGTTTCTATAGGCAAGTGAAAATGTTAGGAAGGCCTATGATGAGAAATGTAACCTAC TCCGACGCCAATTTGCACGAGGCCTAAATGCGCAGGTGATTGATAAGACTAGAGCTGTTG TGAAGGATCTCCATTCCAGGGTATCTGTTGTGATTCAAGCTGTTGATGCAATCTCCAAAA GAATTGAGAAGATAAGGGATGAAGAACTGCAGCCACAGCTTGTCGAGCTAATTCAAGGGT ATATATATATACCTGATAGACAGTATTTCATTTCTTATACCACAATTTCGAATGCAATCT TCCTGTTTCAATTTTTTTCAGTGTATGCTAACAATTTTTTCTCGAACACGTAGGAGAGTT GCGTGTCATTCCATTAATAGGTAGAAAATGGTCAACTACATGCCGATTCTATAGATCTGG TTAATATTACACCAAATTTATTAAATATTTCAATTGTCAACATCACTCCAATTTTTTTGG CAGAATGGCAGTACAGTAGAAGAGCATGCAGTGTTGGAGTTGTCTAGAGTTGCCAGGTTC GGGTTTGAAATCGCCTTCCTCCGCATTTGCGGAGGGAAGACTTGCCTCGGTTTATCCCTT TCCCGGACCTCACCCCTTGTAATTACCATCTCACCCCTTGTGTAATGGGCCAGGCCCAAT TACACAAGTCTATTAATACACATCACCCAACCCTGATTAGGGTTATGGGTTCACATTCCA ATATGGTATCAAAGCACCGATGCTGTGTCTGCCCTTTTTTTAGAATGATAGTGCAATACT GAGAATCAGAAGATTGCAGTTCACAGCCTATTCTAAGAGGTCTCTTTGTTTTGCTGAAAC ATTCTGATGGTTCATAACTGTACCTTCAGTCTTAGCTGATCAAAATCATGTTTTTGACAT TTCTAGTCTACTAACCTTGATCTGACTTCATACAGGCTAATCAGAATGTGGAAACTGATG CTGGAATGTCACCACAAACAGTTCATCACGATCACATTAGCATACCACGTGAAAGACTCG ACCTCGGCGCGTCAAGGTGAGCACCACCATCACCGCCAGGCGGCGATGCATCTGTGGAAT GAGATGGACAGCTTCTCCTCCAGCTTCAGAAACTGGGTCACCGCTCACAAATCGTACGTC GAGGCCCTCAACGCGTGGCTCCAGAAGTGCGTCCTGCAGCCGCCCCAGGACCGGCGCAGG CGCAAACGCAAGGTCTCCTTCCCTCCTCGGCAGGCTGTCTCCCCTCCCATATTCATCCTC TGCGGGGACTGGCTCGCCAGGACAGAACCTCTCCCTGCTGACGAGCTATGCAGATCCCTC AAAGACGTGATGCAGCTCCTCCGCGGCTCGTTCGAGCACCGCGACGAGCAGAACAGGCCC AGAAGCGGCGAGTCGCAGGAGTGCGGGATGCTGGAGAACAGTAGCGAGCAGGAGGCGGCG GCTAAGAGTGGGAGTTGTGCAGCATCAGCTGAAGGGCTGCAGTCGAGACTGACGGCGGTT CTTGACCGCCTGACAAAGTTCTCGGAGGCATCACTGAAGTGCTACGAGGAGCTCAAGCAG AACTACGAGATGGCCTGTGCTGATTATAGGAGAGTTGGACCAAATGCTCAGCTTGCTTAG GATTGATGTTGGCTGTGGTGTGTGACTTTTTGCTATCTCTGTTCTGGATGACAAATTCTC TAGTGTTTTGGTATATATTTTGTGAACAATCAGGTGATAGCACAATCTTTGGCCGAATAT TACTGATGATTTAGTGCTATCAGTTAT