Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048877_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:4:6906864:6911197:1 gene:Zm00001d048877 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable LRR receptor-like serine/threonine-protein kinase

Sequence

ATGAGGACGCAACTTGGTGACAAACGTGGTGTCCTTAGTGATTGGAAGGATAATCAAATG
AGCCCCTGCTACTGGGCCAATGTTAATTGCCAAGATAACAAAGTCACAACAATAATTTTG
AGCTCGTCAGGGTTAACAGGATCCTTATCACCCAGCATTGCAAAGCTAACAACTTTACAG
CAGCTGATACTGGATAACAACAACATTACTGGAGGGATTCCTCCGGAGTTTGGAAACCTA
TCAGGTTTGACAATTCTAAACCTTGGAAGAAATAATTTAAATGGGTCAATACCGGACTCC
CTTGGACAACTTTCTAAACTCCAAAATCTGGATCTAAGCCATAATTATTTGACCGGAAAT
ATCCCAAGCTCTTTCTCAAATCTTCTGTCATTGAGTGATATTAATCTGGCATATAATAAT
ATAAGAGGTGCAATCCCACAACATCTACTTCAGGTGGCCCAATACAACTATGCAGGCAAC
CACTTGAATTGTGGCCAAAATTTATCTGCATGTGAACGAGGCAGCACATTGACAGGTGGA
TCCAAAAATTTCAAGCTAAACGTGGTTATTGGAAGCATTGCTGGAGCAGTCACATTTTCT
GTAACTGTAGTTCTAGTTTTGCTATGGTGGCAAAGAATGCGTTACCGGCCTGAAATCTTC
ATTGACGTGTCAGGTCAGAATGATCATATGCTTGAGTTTGGGCAAATAAAGCGGTTCTCA
TGGCGGGAGCTTCAGATTGCAACCAGCAATTTCAGTGAACAGAATGTTCTTGGCAAGGGT
GGTTTTGGTAAGGTGTATAAAGGAGTTCTTCCAGGTCCAAACAGTATAAAGATTGCAGTG
AAACGACTACTGAACGTGGACAGTCGTGATGGGGAAATGGCTTTCCTCAGAGAAGTTGAA
TTGATAAGCATTGCTGTACACAAGAACATATTAAGGTTGATAGGATTCTGTACAACACCA
ACAGAGAGGCTTTTGGTCTACCCTTTCATGGAGAATCTTAGTGTTGCTTCCCGTTTAAGA
GATATAAAACTAAACGAACCAGCATTAGATTGGTCTACAAGAATGCGAATTGCTCTTGGC
GCTGCCTGTGGTTTGGAGTACCTTCATGAGCACTGCAATCCCAAGATCATCCACCGTGAT
GTCAAGGCTGCAAATGTCCTGCTTGATGGGAACTTTGAAGCAGTGGTAGGAGATTTTGGG
CTGGCGAAGATGGTAGACATAGGGAGGAATACAGTAACAACAGGGGTTCGTGGAACTATG
GGCCACGTAGCTCCTGAGTACATAAAGACAGGAAGGCCATCAGTGAAGACAGATATCTTT
GGTTATGGTGTCATGCTGTTAGAGATTGTGACAGGAGAGCGTGCAATTGCATTCCATCCT
GACCGTATAGAAGAAGCAGGCGAGATCCTGCTCACTGATCAGGTCAAGCTATGGATGGAA
GAAGGGCGACTACTCGACCTAGTGGATCGCAATCTAGATGCTGGAAGGAGAGATTGTCCC
AGCAGAGCGGTGGGAGGAGTGGCAGCTGGCTGA

Peptide Sequence

PEP ID

Zm00001d048877_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:4:6906864:6911197:1 gene:Zm00001d048877 transcript:Zm00001d048877_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable LRR receptor-like serine/threonine-protein kinase

Sequence

MRTQLGDKRGVLSDWKDNQMSPCYWANVNCQDNKVTTIILSSSGLTGSLSPSIAKLTTLQ
QLILDNNNITGGIPPEFGNLSGLTILNLGRNNLNGSIPDSLGQLSKLQNLDLSHNYLTGN
IPSSFSNLLSLSDINLAYNNIRGAIPQHLLQVAQYNYAGNHLNCGQNLSACERGSTLTGG
SKNFKLNVVIGSIAGAVTFSVTVVLVLLWWQRMRYRPEIFIDVSGQNDHMLEFGQIKRFS
WRELQIATSNFSEQNVLGKGGFGKVYKGVLPGPNSIKIAVKRLLNVDSRDGEMAFLREVE
LISIAVHKNILRLIGFCTTPTERLLVYPFMENLSVASRLRDIKLNEPALDWSTRMRIALG
AACGLEYLHEHCNPKIIHRDVKAANVLLDGNFEAVVGDFGLAKMVDIGRNTVTTGVRGTM
GHVAPEYIKTGRPSVKTDIFGYGVMLLEIVTGERAIAFHPDRIEEAGEILLTDQVKLWME
EGRLLDLVDRNLDAGRRDCPSRAVGGVAAG

Transcript Sequence

Transcript ID

Zm00001d048877_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:6906864:6911197:1 gene:Zm00001d048877 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable LRR receptor-like serine/threonine-protein kinase

Sequence

AGCCAGATTCCCAGATGTTTACAGGAGAAATTCCAATTGGTCACAAGAGTGCATGTATGT
TAGCTGTGTCCAAATCTGAGCATTGTATTGGGAATATATTAACTGCTACAGAGATTCCAG
ATTGCATGTGAAAGCACTGACTAGATTCAGTAGGAAGTATTTCACCACTTTTTGAGAACT
TGAGCCTACCTTGGGACCCCACAAATAAGACTGTTTTGTCTGCAGTCGAAGCATTGGTTG
AAATGAGGACGCAACTTGGTGACAAACGTGGTGTCCTTAGTGATTGGAAGGATAATCAAA
TGAGCCCCTGCTACTGGGCCAATGTTAATTGCCAAGATAACAAAGTCACAACAATAATTT
TGAGCTCGTCAGGGTTAACAGGATCCTTATCACCCAGCATTGCAAAGCTAACAACTTTAC
AGCAGCTGATACTGGATAACAACAACATTACTGGAGGGATTCCTCCGGAGTTTGGAAACC
TATCAGGTTTGACAATTCTAAACCTTGGAAGAAATAATTTAAATGGGTCAATACCGGACT
CCCTTGGACAACTTTCTAAACTCCAAAATCTGGATCTAAGCCATAATTATTTGACCGGAA
ATATCCCAAGCTCTTTCTCAAATCTTCTGTCATTGAGTGATATTAATCTGGCATATAATA
ATATAAGAGGTGCAATCCCACAACATCTACTTCAGGTGGCCCAATACAACTATGCAGGCA
ACCACTTGAATTGTGGCCAAAATTTATCTGCATGTGAACGAGGCAGCACATTGACAGGTG
GATCCAAAAATTTCAAGCTAAACGTGGTTATTGGAAGCATTGCTGGAGCAGTCACATTTT
CTGTAACTGTAGTTCTAGTTTTGCTATGGTGGCAAAGAATGCGTTACCGGCCTGAAATCT
TCATTGACGTGTCAGGTCAGAATGATCATATGCTTGAGTTTGGGCAAATAAAGCGGTTCT
CATGGCGGGAGCTTCAGATTGCAACCAGCAATTTCAGTGAACAGAATGTTCTTGGCAAGG
GTGGTTTTGGTAAGGTGTATAAAGGAGTTCTTCCAGGTCCAAACAGTATAAAGATTGCAG
TGAAACGACTACTGAACGTGGACAGTCGTGATGGGGAAATGGCTTTCCTCAGAGAAGTTG
AATTGATAAGCATTGCTGTACACAAGAACATATTAAGGTTGATAGGATTCTGTACAACAC
CAACAGAGAGGCTTTTGGTCTACCCTTTCATGGAGAATCTTAGTGTTGCTTCCCGTTTAA
GAGATATAAAACTAAACGAACCAGCATTAGATTGGTCTACAAGAATGCGAATTGCTCTTG
GCGCTGCCTGTGGTTTGGAGTACCTTCATGAGCACTGCAATCCCAAGATCATCCACCGTG
ATGTCAAGGCTGCAAATGTCCTGCTTGATGGGAACTTTGAAGCAGTGGTAGGAGATTTTG
GGCTGGCGAAGATGGTAGACATAGGGAGGAATACAGTAACAACAGGGGTTCGTGGAACTA
TGGGCCACGTAGCTCCTGAGTACATAAAGACAGGAAGGCCATCAGTGAAGACAGATATCT
TTGGTTATGGTGTCATGCTGTTAGAGATTGTGACAGGAGAGCGTGCAATTGCATTCCATC
CTGACCGTATAGAAGAAGCAGGCGAGATCCTGCTCACTGATCAGGTCAAGCTATGGATGG
AAGAAGGGCGACTACTCGACCTAGTGGATCGCAATCTAGATGCTGGAAGGAGAGATTGTC
CCAGCAGAGCGGTGGGAGGAGTGGCAGCTGGCTGAGCTCCAACGACGACAACAGCATGAG
ATGAGGCAACAGGGCAAACTATTCAACTTCAGTGAAGAGTCTCAAAACATCCAGGAAGCC
ATTGAGTTGTCAGCTGGCAGATGAGCTGTCATAAGAAAGTGACATGATTTTCACTTGTTC
CTTAAATAGAAAGGCTATAAGAGAAATATTGACTATTAGGAATAGTCTATAAGGTCCTGG
ACTCCTGGTGTAATATCTTGCACAAGTAACTCCGTCCATATGCTGTTAATACAACGATAG
GACCACACCTAGCTCAGACCATGTGTATATCAAGAATAGACTGTTCTACATTTTAATTGC
ATTCTGTATTACTGG