Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048835_T081
CDS Infomation	cds chromosome:B73_RefGen_v4:4:6144642:6150247:-1 gene:Zm00001d048835 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidate phosphatase PAH2
Sequence	ATGTATGCCGTGGGGAAGGTGGGCAGCCTCATCTCCCGCAGCGTGTACACCGTCTCCGGC CCGTTCCACCCGTTCGGCGGCGCGGTCGACATAGTCGTTGTGCAGCAGCAGGACGGCAGC TTCAAGAGCTCGCCGTGGTACGTGCGGTTCGGCAAGTTCCAGGGGGTTCTCAAGTCGAGG GAGAAGGTTGTCGACATCTCCGTCAATGGCGTCGACGCAGGGTTCCACATGTACCTGGAC AGCAACGGCGAGGCTTACTTCCTCAGGAACGCGGACCCGAATGGTGAGGAAGGGGAGTTC ATTGTCTCCCCCGCCTCGTCGGGAGATGAGCGAGAGGTGCCGATCCAGGAAGCTCAGCTG AGGAAGTCGAAGAGCACTTCGTGTGATAGCTCGACGATGGAAGCCGACGTCGGTGAGGGC AAGATTCTTGCGAGGACAACCTCGAGGCGGATAACCATACTTGAAAGGATGTTTGGCCGG AAATCGATTAAGAACAATGCCCATGCTGTGGATAGGGTGAGTTCATTGGAGCGTGCAGAG GTCGCTGCAGAACTCCTAGATACCAAGTGGTCAACAAATCTCCCACGTAGTTCAAAACCT AATGGTTCAAATGATGAGCCTTCCAAGAGCAACAATGATCAGATGGAAACCTCAAAACCT GTATTTTCGGAACATAGTTTGGATCATGGGAAAGAGATGGACTCTAACTGTGACAATGCT CACTGCAATTCATGCAGCCCTCGTGGAGGAAGAAACAGTTCAGCAGATGAAACCGATCCG TGTTTACAAGCCACTATTGTGAAGAAAGAGGTGGTTGAGATACACGCGCGTGAGAGCAGC GACTTCACTGATAATATCACTTCAATCACACATCAACAAGGGTCAGAATCTTCGTCAAAT GATCTGGGAACAGATAAACTTATGCAGCAGTCTGTCGATACTCAAGATGAGTTGCTGCAT GATGTTGAAGATGTAACTGAAAGGGAGACACATGCAGAGGAGGTTATTTCCAATGACATT TTTGAAATCCATGTTGTTGAGACAGACATTACAAGTGGTAAGAGCGAGGTGGATTCTGAG ATTGTTACTGTGGATCCAGAACCAGATCGAGCTAACCAGAATTTTACAGATACAAATTAC CAAAATTATGGCACCACAGATATTTCATCTGAAAGACATGAGGTTTCATTGATCCCTTCT GCACAGGATGCAGTTCAAGAGAAAATAGTTATCCTCAGCAGTTCTGAGGCTGTGGAGGGC TCACTAGATGCAGTTCCAGAGAAAGTAGTCATTCTCAGCAGTTCTGAGACTGTGGATAGC TCATATGCTGTGTCCTGTATTTTGGATGACACAGTTCATGATGCTTCTGATATCTCACAG GCTGACGGTGTACAACATGAGGAGCACTCTAGTATCTCTGATGGGAGTACAGAAAAGCTA ATTTCTGAGGAAAGTTCATTAGTATGCTATGGTGTTCCCAGCAACAAAAAAGACTTGGTT AATATAGCTGTTCAAGAAAGTAAAGCCTTTATCTTAAAAAATCCTGCCTCCCAAATCTTG GAAGAGAGTGGTCCAGGTTTGGATGTATCTACAGACAGTGTTTCCCTTTCACATGCAGAC TCAGCTCCTGATTTAGCTTGTCAGCATGTTTCTCCTAATGTTGAAGATACAACAAGTTAT GAGCCTGGCATTGGTCCTGAAGATGTAACAAAAAACTCAGTTGTGGAAAATGGAGCATGC AGCGGGGAACTTGTTGTTTCTGTTATTCAGACCTCAGCGGGAGATGGACTGACAAAATGC ATTGCTCATCCAGCTGTTTTTTCTAATAAAATAGAAGTAGAAGGCTCACCAACTTCTGCT GGATTTTCCAGTTTGATCAGTGTTGAAGTGCAAAACACAAAACTAGAAGATGACACAAAC AAATCTAGTTCTGTGATTGGAGATGAAGCTGGTTTTGTGCCTGAGGCTACAGCTGAGCTT GATGAAGAAGCAGAACCAGTTATATCATTATCTGAATATACAGAAGAAATTCAGTTTCAA TTTAGTGATGCTGAAAATTTTGCAGATAGAAAGGCCACGGATGACATGGTGGCTAACAAA ACAACAGGTGAAGTAGAACATGATGAATCTGATTGTGACACAGAGAAACAGGAAGAAGGT GATGTAGGTCTTGTAAATGACTTGGAGAACTGTTCTGCGTCATTAAAGCCTGTGAGTAGC CCTGTTTCTATTCCTGCAATTGACTTCCAGTCAGGAAATAGTAACAGAGAGGCTAAATCT CTACCAAATCTCCGTTCTCATATACATGATCTTGAAAGGTCTTATAGTTTTCAGCTAAGC CGCTCACTGCAATCAACTGCTGAAAATAATGGAATTGATCTAGTCAAGAGCATGAATTAT GCTTTTCTTGAGCAGAAATCAGAAGCTATTGGTGATTTTTCAGAAGAAAATAACAGCCCT CCTGAGGTTACCAACACTGTAGCACTTGATGGCAACCATGCTGATGATCTGAAAGTTGAT GCGTTCATTCCTTTTGCAGAATTATCACTATGCAGACACCTGTTATCTGAAGGCATGGGG GAGGATGCTGCTTGCAGTGCATTTGATTCTGAGAAGGTAACCTTAGAGGAGTTCCGTAAC ATGAAGCAATCACTGATGCGAAACAACAAACTAGTTGTTAGGATTGCTGGCCGCTACTTT CCCTGGGATGCTGCTGCACCTATAGTACTCGGTATGATTTCTTTCAGTGAGGAACAAGTT TTTGAACCCAAAGGAATGATAAATGTGGAGCGAGTTGAGCAAAGTGCAGCTCCAGGTGGC AGCTGGAGCATCTGGCCATTTAGTTTCAGACGAACAAGGACTATTACTGCTATCCAGCCA GTTTGTGAAAGTATTGTTGAGACTTCTGTATCCACTCCTAAAGAATTGACACATTTTAAA GAACTAGATAGAGAAAGGAATAAATCCAGGGTAAAGAGGATTGAGAGGAAGGTGCGATCA CTCACTCCAACATCTGACGAGCTTGCATCTCTTGATCTCAGAGAGGGCAGGAACGTGGTA ACATTTACGTTCTCAACTGCAATTGTTGGGAAACAGCAGGTTGATTGCCACATATATTTA TGGAGATGGAATACACGCATTGTAATATCTGATGTGGATGGAACTATCACCAAGTCTGAT GTTCTTGGGCAGTTCATGCCACTAGTTGGAGTTGATTGGTCCCAAAACGGAGTTGCTCAT TTATTTTCTGCAATAAAGGAAAATGGATACCAGCTTCTATTTCTGAGTGCACGCGCTATT TCACAAGCCCACATCACAAGACAGTTTCTTTTCAACCTAAAGCAGGACGGCAAAGCACTT CCTGATGGCCCTGTTGTTATATCTCCAGATGGTCTCTTCCCGTCACTTTACAGAGAAGGT GAGCACATCCTGATATGTTTTTGCTATTTTCTATTCAGTTAA

Peptide Sequence

PEP ID	Zm00001d048835_P081
PEP Infomation	pep chromosome:B73_RefGen_v4:4:6144642:6150247:-1 gene:Zm00001d048835 transcript:Zm00001d048835_T081 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidate phosphatase PAH2
Sequence	MYAVGKVGSLISRSVYTVSGPFHPFGGAVDIVVVQQQDGSFKSSPWYVRFGKFQGVLKSR EKVVDISVNGVDAGFHMYLDSNGEAYFLRNADPNGEEGEFIVSPASSGDEREVPIQEAQL RKSKSTSCDSSTMEADVGEGKILARTTSRRITILERMFGRKSIKNNAHAVDRVSSLERAE VAAELLDTKWSTNLPRSSKPNGSNDEPSKSNNDQMETSKPVFSEHSLDHGKEMDSNCDNA HCNSCSPRGGRNSSADETDPCLQATIVKKEVVEIHARESSDFTDNITSITHQQGSESSSN DLGTDKLMQQSVDTQDELLHDVEDVTERETHAEEVISNDIFEIHVVETDITSGKSEVDSE IVTVDPEPDRANQNFTDTNYQNYGTTDISSERHEVSLIPSAQDAVQEKIVILSSSEAVEG SLDAVPEKVVILSSSETVDSSYAVSCILDDTVHDASDISQADGVQHEEHSSISDGSTEKL ISEESSLVCYGVPSNKKDLVNIAVQESKAFILKNPASQILEESGPGLDVSTDSVSLSHAD SAPDLACQHVSPNVEDTTSYEPGIGPEDVTKNSVVENGACSGELVVSVIQTSAGDGLTKC IAHPAVFSNKIEVEGSPTSAGFSSLISVEVQNTKLEDDTNKSSSVIGDEAGFVPEATAEL DEEAEPVISLSEYTEEIQFQFSDAENFADRKATDDMVANKTTGEVEHDESDCDTEKQEEG DVGLVNDLENCSASLKPVSSPVSIPAIDFQSGNSNREAKSLPNLRSHIHDLERSYSFQLS RSLQSTAENNGIDLVKSMNYAFLEQKSEAIGDFSEENNSPPEVTNTVALDGNHADDLKVD AFIPFAELSLCRHLLSEGMGEDAACSAFDSEKVTLEEFRNMKQSLMRNNKLVVRIAGRYF PWDAAAPIVLGMISFSEEQVFEPKGMINVERVEQSAAPGGSWSIWPFSFRRTRTITAIQP VCESIVETSVSTPKELTHFKELDRERNKSRVKRIERKVRSLTPTSDELASLDLREGRNVV TFTFSTAIVGKQQVDCHIYLWRWNTRIVISDVDGTITKSDVLGQFMPLVGVDWSQNGVAH LFSAIKENGYQLLFLSARAISQAHITRQFLFNLKQDGKALPDGPVVISPDGLFPSLYREG EHILICFCYFLFS

Transcript Sequence

Transcript ID	Zm00001d048835_T081
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:6144642:6150247:-1 gene:Zm00001d048835 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidate phosphatase PAH2
Sequence	CTTCGGTCCCGGAATATGCCCCCGGCGTCTCCCTCCTCGCGTTCCTCTCGTCGGTGAGCT CCTGCCGCCTGGCTCGCACAGCCGATTTGCCTCAGTCCAGATCGTGCCTCCTTCTTCCTA GATCGGGTCCGAATTCGGCTACCCTCGCCACCGCCCTACGCCAGGTGCCGAGGCCTCCGC CGATCTCTTCGCCGGCGAAGAGCGGCCACCAGCTTGTGGATGGAGGAGGAGGCGCTGGGT CGTGGTGGTGGTGAAAAGCTTTGATTTCGTAGCCGTGGTGGACGCCGCTGCTAATGCCCT TGCCGTGCCTCGTTGGTGGCGTGCAAGATGTATGCCGTGGGGAAGGTGGGCAGCCTCATC TCCCGCAGCGTGTACACCGTCTCCGGCCCGTTCCACCCGTTCGGCGGCGCGGTCGACATA GTCGTTGTGCAGCAGCAGGACGGCAGCTTCAAGAGCTCGCCGTGGTACGTGCGGTTCGGC AAGTTCCAGGGGGTTCTCAAGTCGAGGGAGAAGGTTGTCGACATCTCCGTCAATGGCGTC GACGCAGGGTTCCACATGTACCTGGACAGCAACGGCGAGGCTTACTTCCTCAGGAACGCG GACCCGAATGGTGAGGAAGGGGAGTTCATTGTCTCCCCCGCCTCGTCGGGAGATGAGCGA GAGGTGCCGATCCAGGAAGCTCAGCTGAGGAAGTCGAAGAGCACTTCGTGTGATAGCTCG ACGATGGAAGCCGACGTCGGTGAGGGCAAGATTCTTGCGAGGACAACCTCGAGGCGGATA ACCATACTTGAAAGGATGTTTGGCCGGAAATCGATTAAGAACAATGCCCATGCTGTGGAT AGGGTGAGTTCATTGGAGCGTGCAGAGGTCGCTGCAGAACTCCTAGATACCAAGTGGTCA ACAAATCTCCCACGTAGTTCAAAACCTAATGGTTCAAATGATGAGCCTTCCAAGAGCAAC AATGATCAGATGGAAACCTCAAAACCTGTATTTTCGGAACATAGTTTGGATCATGGGAAA GAGATGGACTCTAACTGTGACAATGCTCACTGCAATTCATGCAGCCCTCGTGGAGGAAGA AACAGTTCAGCAGATGAAACCGATCCGTGTTTACAAGCCACTATTGTGAAGAAAGAGGTG GTTGAGATACACGCGCGTGAGAGCAGCGACTTCACTGATAATATCACTTCAATCACACAT CAACAAGGGTCAGAATCTTCGTCAAATGATCTGGGAACAGATAAACTTATGCAGCAGTCT GTCGATACTCAAGATGAGTTGCTGCATGATGTTGAAGATGTAACTGAAAGGGAGACACAT GCAGAGGAGGTTATTTCCAATGACATTTTTGAAATCCATGTTGTTGAGACAGACATTACA AGTGGTAAGAGCGAGGTGGATTCTGAGATTGTTACTGTGGATCCAGAACCAGATCGAGCT AACCAGAATTTTACAGATACAAATTACCAAAATTATGGCACCACAGATATTTCATCTGAA AGACATGAGGTTTCATTGATCCCTTCTGCACAGGATGCAGTTCAAGAGAAAATAGTTATC CTCAGCAGTTCTGAGGCTGTGGAGGGCTCACTAGATGCAGTTCCAGAGAAAGTAGTCATT CTCAGCAGTTCTGAGACTGTGGATAGCTCATATGCTGTGTCCTGTATTTTGGATGACACA GTTCATGATGCTTCTGATATCTCACAGGCTGACGGTGTACAACATGAGGAGCACTCTAGT ATCTCTGATGGGAGTACAGAAAAGCTAATTTCTGAGGAAAGTTCATTAGTATGCTATGGT GTTCCCAGCAACAAAAAAGACTTGGTTAATATAGCTGTTCAAGAAAGTAAAGCCTTTATC TTAAAAAATCCTGCCTCCCAAATCTTGGAAGAGAGTGGTCCAGGTTTGGATGTATCTACA GACAGTGTTTCCCTTTCACATGCAGACTCAGCTCCTGATTTAGCTTGTCAGCATGTTTCT CCTAATGTTGAAGATACAACAAGTTATGAGCCTGGCATTGGTCCTGAAGATGTAACAAAA AACTCAGTTGTGGAAAATGGAGCATGCAGCGGGGAACTTGTTGTTTCTGTTATTCAGACC TCAGCGGGAGATGGACTGACAAAATGCATTGCTCATCCAGCTGTTTTTTCTAATAAAATA GAAGTAGAAGGCTCACCAACTTCTGCTGGATTTTCCAGTTTGATCAGTGTTGAAGTGCAA AACACAAAACTAGAAGATGACACAAACAAATCTAGTTCTGTGATTGGAGATGAAGCTGGT TTTGTGCCTGAGGCTACAGCTGAGCTTGATGAAGAAGCAGAACCAGTTATATCATTATCT GAATATACAGAAGAAATTCAGTTTCAATTTAGTGATGCTGAAAATTTTGCAGATAGAAAG GCCACGGATGACATGGTGGCTAACAAAACAACAGGTGAAGTAGAACATGATGAATCTGAT TGTGACACAGAGAAACAGGAAGAAGGTGATGTAGGTCTTGTAAATGACTTGGAGAACTGT TCTGCGTCATTAAAGCCTGTGAGTAGCCCTGTTTCTATTCCTGCAATTGACTTCCAGTCA GGAAATAGTAACAGAGAGGCTAAATCTCTACCAAATCTCCGTTCTCATATACATGATCTT GAAAGGTCTTATAGTTTTCAGCTAAGCCGCTCACTGCAATCAACTGCTGAAAATAATGGA ATTGATCTAGTCAAGAGCATGAATTATGCTTTTCTTGAGCAGAAATCAGAAGCTATTGGT GATTTTTCAGAAGAAAATAACAGCCCTCCTGAGGTTACCAACACTGTAGCACTTGATGGC AACCATGCTGATGATCTGAAAGTTGATGCGTTCATTCCTTTTGCAGAATTATCACTATGC AGACACCTGTTATCTGAAGGCATGGGGGAGGATGCTGCTTGCAGTGCATTTGATTCTGAG AAGGTAACCTTAGAGGAGTTCCGTAACATGAAGCAATCACTGATGCGAAACAACAAACTA GTTGTTAGGATTGCTGGCCGCTACTTTCCCTGGGATGCTGCTGCACCTATAGTACTCGGT ATGATTTCTTTCAGTGAGGAACAAGTTTTTGAACCCAAAGGAATGATAAATGTGGAGCGA GTTGAGCAAAGTGCAGCTCCAGGTGGCAGCTGGAGCATCTGGCCATTTAGTTTCAGACGA ACAAGGACTATTACTGCTATCCAGCCAGTTTGTGAAAGTATTGTTGAGACTTCTGTATCC ACTCCTAAAGAATTGACACATTTTAAAGAACTAGATAGAGAAAGGAATAAATCCAGGGTA AAGAGGATTGAGAGGAAGGTGCGATCACTCACTCCAACATCTGACGAGCTTGCATCTCTT GATCTCAGAGAGGGCAGGAACGTGGTAACATTTACGTTCTCAACTGCAATTGTTGGGAAA CAGCAGGTTGATTGCCACATATATTTATGGAGATGGAATACACGCATTGTAATATCTGAT GTGGATGGAACTATCACCAAGTCTGATGTTCTTGGGCAGTTCATGCCACTAGTTGGAGTT GATTGGTCCCAAAACGGAGTTGCTCATTTATTTTCTGCAATAAAGGAAAATGGATACCAG CTTCTATTTCTGAGTGCACGCGCTATTTCACAAGCCCACATCACAAGACAGTTTCTTTTC AACCTAAAGCAGGACGGCAAAGCACTTCCTGATGGCCCTGTTGTTATATCTCCAGATGGT CTCTTCCCGTCACTTTACAGAGAAGGTGAGCACATCCTGATATGTTTTTGCTATTTTCTA TTCAGTTAATTGTCAGTCAGCAAAAAGAGTAGAAGACACAAAATAACTTATCTCCACTGA AAAATGTTGCATT