Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048833_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:6134871:6138798:1 gene:Zm00001d048833 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:growth-regulating-factor-inteacting factor2 description: growth-regulating-factor-inteacting factor2
Sequence

ATGATGCAGCCTGGTATAGTGCCTGGTGCGGGGCATTACATGTCACAAGTACCAATGTTC
CCTCCAAGAACCCCATTAACCCCACAGCAGATGCAGGAGCAGCAGCAACAACAACAGTTT
CAGCAGCAGCAGCAGCAAGTGCAGGCTCTTACATTTCCTGGACAGATGGTCATGAGACCA
GGCACCATCAACGGTATGCAGCAGCAGCAGCCTATGCAGGCTGACCCTGCCCGGGCAGCA
GCGGAGCTGCAGCAGGCAGCACCTATCCCAGCTGACGGGCGAGGAAGCAAGCAGGACACC
GCGGGTGGGGCGAGCTCAGAGCCTTCTGCCAATGAGAGCCACAAGAGCGCCACCGGAGCA
GATACCGAGGCAGGTGGCGACGTGGCCGAGAAATCCTAA

Peptide Sequence

PEP ID

Zm00001d048833_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:6134871:6138798:1 gene:Zm00001d048833 transcript:Zm00001d048833_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:growth-regulating-factor-inteacting factor2 description: growth-regulating-factor-inteacting factor2
Sequence

MMQPGIVPGAGHYMSQVPMFPPRTPLTPQQMQEQQQQQQFQQQQQQVQALTFPGQMVMRP
GTINGMQQQQPMQADPARAAAELQQAAPIPADGRGSKQDTAGGASSEPSANESHKSATGA
DTEAGGDVAEKS

Transcript Sequence

Transcript ID

Zm00001d048833_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:6134871:6138798:1 gene:Zm00001d048833 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:growth-regulating-factor-inteacting factor2 description: growth-regulating-factor-inteacting factor2
Sequence

GCACAAGTAGCTTCGGCTCCCGGCAGTACCGCAACTCCTCTTCCACCAAACTCCAGAGGC
ATCCAACAGCAGGCGAGGAAAGCAAGACACGCCCACCCACCCGCTCCGGCAGCCAGCGGC
TATGCAGCAGCAGATGCCCATGCCGCCGGCGCCCGCTGCCGCCGCGGCGGCGGCGCCCCC
GGCGGCCGGCATCACTACCGAGCAGATCCAGAAGGTACGAGCCGCCCCGCCCCGCCCCGC
CCCGCGCCTACCTGCTAGGATTTGGACGCCGTGCTTGGTTAGGTCCGCCGGCCGCCTTAG
CTCGTTTCGCCAAGAAACGGACGGGTACTTCTCCTCGGGTGGCTGGCTCCTGCGCGCGCC
GTGCCTCCTCCTTGCTTTGTCGGGCTCGTGCGCCGCCGACTCGTCCGTTTTGCCCTTCCT
CCTATGGCTGCGTCGGTTTTAGGGGTTGGTTCCAATCAAAGATTGGGTCTTTTCGGCTGG
CTGTTTGGTTAGGGCGAGATTGGGCGTCCTTGTGCCTTTTTCCATTATCGCAGATTGCTG
GATTGAGTGCTTAGGTCAGTCGGTGGGTGGCAGTACTGTAATAGCAGATTCTTGAATCGA
GAGTTTTATTTCAATCAGCGAGTAACAGTAGTTTGGTGGCGTGCTCTGGCTGTTTGGAGT
GCTATGCTCGCCTCACCAAACTTGACTTAGAACAGAACTCGAGGAGGTCGAGCTGGAGGA
GGCGGTCAACAGTGCAAACCCTCGATGCTGTACGGTTGTGGTTAGTGACTAATCATTGAA
GGACTTTGGCACCACTGAGGGGGTGTTTCAATGCACTAGAGAGCTCATAGGTAGTTGGCT
AAAAAAATGCTAGTGAAATTAGCTAGGTAACTATTAGCTAATTTGCTATAAAAGTAGCTA
ATAGCTGGATTATAAGTTAGACTGTTTGAGACGTCTTTAGCTAATTTTAGCGGTGTTAGC
CCGAGTGCTTTCAAACACCCCCTACAACGTGTTTTTTTTTTAAATGCCAAAAATGGGCAA
GGCACCCTATTATGTCATTGAGGTACCATTCTTGTTGTTGTTTCAGTATAAATGCAAAAT
GTGGGTAATATGCCTTTGAAATTTTGGCATAGGCCAAGTGACCAGTAGGATCATGACATG
CGTTCAAATCAGTTTTGAACTTTGGTCAAAGGCCATGTGAGCAATGACACTAATTTGCTA
TTTGAATATTCAGTTTTGAATTTTTGGTAAAGGCTAAATATGGCACTATAGCTAGCCGGC
ACTGTGCCACACGGGTTCTCAACCTGTGCTTATATTGCAGTTTGTGGTGGGGCAGCTAAC
CAGCCCTTGTTCCTCTGGTATGCAGTAATGCAGTTTGGCACAATAATTAGCCAGTCCTGT
GCCATGTGGCACAGGTTCTAAGCCTGTGCTTTATATTACCCTGTGGTGGGGCAGCTAACT
GGGCCCTTAGTTCTCTGCCTTGCAGTTTGACACTTTGGCTTACTGGTCTGAAGTCACTTT
TACGGCCCCGTTTGGATCCTTGGAATTGAATTCCATTCTAATAATAGTAATTTAGGCATG
TATCAATTAAGCTAATACAGTTTTATAAGAAATATATTTGTATATTATTATTAGCAAGAT
GTGTGAGATATTTATGTGCTACATTTTTACATAAAGGAGTGAGCCGAAGAACGTCTTATA
AGTTGCAGATTAGAAACATTGTCTGCTGATATATAAAATCATTTCTCATTCTCCGTCCCA
TGAATTTGAGATAGGCTTCTATCTGAAATTTGGAAAGTGGTGGAATGTCAAATTCCAAAC
CAAATAGGTTACTTTATTTAGTAAATTCCAATTCCTCCAAAATGAATGGATCCATATGCT
GCTTGTGTGCATTCAAGCATGATATGGCGACTTCTAGTGTAACTTCCTGTGTCTTTGTGA
CAATTCGTTCTGACCTGCATGGCTGCAACTTCTTTTTAATGGATTCTTCAAGATGAGCAC
CAAACTGCATGAGCAGAGAGTGCAAACAATGGAGTGCTAGGTCAGATTAAATGTTATGGA
GGTGCTATGATCCACACTAGAAATCATCATGCCACGTTAGAATCCACTCAAGCAGCATGC
AATGTGGTCAATGGCGGTAAATCTAGGAAGAGACACAGGTGCTAGAATACAAAAGCAAAA
GTTGTAGGGCGGTTTGATGAACCCCATATTTACAGATGGGTTTTAGGAATTTCCCCTTAG
CACGATCGTCATCCAACAATGCTCTTCTGTCAACCATGCTTAATAATTCTTAGACAAAAT
TCTCTTTGCCATGGAGTGTAGCCTGCTGGTATAATACTATCGGCTTTGTCAGTCTTCCAT
TCACAGATAATGTGGTTTGTTAGGCTACACTATCTTGATCTGGTTACTAGCTGTGACATG
CTAGCAGTCATGTACTGTCCTCCACAATGTGTTGGTGTCTAAAACTGAAACTCGCAACCA
AAATTCTGGAGTTAATGCACAATTAAGCTTGGCTTTCAAGCAACGGAGCATAACTGCAGG
AAAGATGGAAATATCAGGCCTCTATACTTTTGAATAAAACCACTTGCACCATTCTTTCGC
AGAGAAGTATTTGGACGAAAATAAGCAACTTATTTTGGCCATCCTGGAAAATCAGAACTT
AGGGAAGTTGGCTGAATGTGCTCAGTATCAAGCTCAACTTCAAAAGAACCTCTTGTACCT
GGCTGCGATTGCTGATGCCCAACCCCAGCCTCCGCAAAACCCTGCAGGTCGCCCTCAGAT
GATGCAGCCTGGTATAGTGCCTGGTGCGGGGCATTACATGTCACAAGTACCAATGTTCCC
TCCAAGAACCCCATTAACCCCACAGCAGATGCAGGAGCAGCAGCAACAACAACAGTTTCA
GCAGCAGCAGCAGCAAGTGCAGGCTCTTACATTTCCTGGACAGATGGTCATGAGACCAGG
CACCATCAACGGTATGCAGCAGCAGCAGCCTATGCAGGCTGACCCTGCCCGGGCAGCAGC
GGAGCTGCAGCAGGCAGCACCTATCCCAGCTGACGGGCGAGGAAGCAAGCAGGACACCGC
GGGTGGGGCGAGCTCAGAGCCTTCTGCCAATGAGAGCCACAAGAGCGCCACCGGAGCAGA
TACCGAGGCAGGTGGCGACGTGGCCGAGAAATCCTAAGTCGAGCAGCCTGGGCAGGGCGA
AAAATAATGCCTTGTATACTAGCAACGAAAGAAAAAAAGAGTCTTTGAATGACAGCTACT
AGCCCCTACCAGTTTACTGTGTGGTTTAGATGATGTAGAACAAAGTTTAGATTGGTGATG
ATGTAAACCGTCCAATATTGATACTGCGTTCTTACATTGCTGTAGTCAATTATATGAATA
ATTTCATATAAGCATGTTGCCCTAGTGGATTTTAC