Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048741_T133
CDS Infomation	cds chromosome:B73_RefGen_v4:4:4812820:4825077:1 gene:Zm00001d048741 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP107
Sequence	ATGGTAGTAAGCACACTCTGCAGCAGCTTGCCACTTCTACCCAACATCATCGTCCTCCTC TTGTTCACAACCATTTCCGACTCCACGAACAGCAACAGCGATCTCAATGCACTCTTGTCA TTCAAATCCCTCATAACAAAGGACCCAATGGGTGCACTGTCATCTTGGGATGGGGACGCT TCTAACAGGAGCGCTCCTCATTTCTGCCGGTGGAACGGCGTGACGTGCAGCAGCCACCAG CACGGCAGCCATGTCACTGCCTTGCGCCTGCGAGCCTTCGGTCTGGAAGGCAACATCTCC CAGTCGCTTGGGAATCTTAGCCACCTCCAAACCCTGGATCTGTCGAACAACAACCTAGAA GGCGAGATACCTTCCAGTATCGGTAACTTGTTTGCTCTCCATTTTCTCAACCTAAGTGTT AACCACCTGTCCGGGAACGTTCCTCAGTCCATCGGCCGTCTTTCCGAACTCGAAATTCTG AATTTCCGCGACAATGACATCGTAGGAAGCATTCCTTCTTCAGTGCTCAACCTTACAGGA CTCACAATGCTTAGTGCCACCGAAAATTACATGACAGGGAGGATTCCAGATTGGTTGGGA AACTTGACGGATCTGACAGATTTGAACTTGGCATGGAATAACTTCAGTGGACAGATCCCA CAAGCTTTAGGTAAGCTACCTAACCTTGCTAGATTGACTATGCAAGGTAATCAATTGGAA GGTTTAATCTCTCCTACACTGTTTAACATTTCATCCCTTGAGAATTTAAATCTCGGCTAT AACAAGCTTTCAGGTTCTCTACCTCCAAATATTGGATTTACACTTCCAAATATTGTAGCA TTTAGTGTATGCTATAACAAATTTGAGGGTCCAGTTCCATCCTCCCTGTCCAATATTTCT GTGCTCCAACAGCTCATCCTCCACGGGAACAGATTTCATGGCCGAATTCCACCTAATATT GGTGTCCACGGCAGCTTAACTAATCTTGAATTAGGCAACAATCAGCTTCAAGTCGTGGAT ACTAAAGATTGGGATTTTCTAACCCCTTTGGTGAATTGCAGTCATCTTAAATATCTTAAT CTTGAGCTAAATAACATTTCTGGCATTTTGCCAAATGCTGTTTCTAATCTCTCCTATGAG CTGGAAGCGTTACTGATGGGTGGAAACCAAATAACCGGGACCGTACCTTCAGGGATAGGT AGGCTTCAAAAGCTCCAAATACTTGATCTGTCAGATAACCTGTTTTCAGGCGCCGTACCT TCGAGTATAGGTAAACTCTCCAGCCTAGACAGCCTTGTGCTATTCAGTAATAAATTTGAC GGGGAGATCCCTTCATCACTTGGAAATCTTACAAAACTAACCGAGCTAGTTTTACATTCC AATGACCTGCATGGGAGCATGCCTCCAAGCCTTGGTAATATGACAATCTTAGAATCCATC GACCTTTCATATAACCGCCTCAGTGGCCAAATTCCCCAAGAGATCTTAAGCATGTATTCC CTTACAAAATTTCTAAATCTCTCCAACAATTTTTTCAGCGGACCCATTTCCCAACAGATC AGGCTCTTGATCAGTCTTGGTACAATGGATCTCTCAAGCAATAATTTATCTGGTGAGATT CCACATACCCTTGGTAGCTGTGTTACACTGCAGTTCCTGTATTTGCAAGGAAACCTCCTA CAAGGTCAAATACCAGTGGAACTGAATGCACTAAGAGGCTTAGAAGTTTTGGATATCTCA AGCAACAACCTGTCAGGACCCATTCCTGATTTTCTTGGTGACTTCCAAGTTCTCAAGAAG CTGAACCTATCATTCAATAACCTATCTGGTCCGGTGCTTGATCGAGGTATCTTCCACAAT AATGCCACCTCTGTTTCACTTTCTGGTAATGCCATGCTTTGTGGAGGGCCTGGTTTCTTT CAACTTCCACCATGCTCAACTCAAGCAACCTATGGCCGTTCCAATCATCAACGAATGCAT GTCTTGGCCTTTTCCTTTACTGGAGCTTTAGTAGTCTTTGTGTGCATCACTGTATGCTAC TTCATGAAAAGGGCATCTGACAAAGCAAGTGATGCTGAGCATGGGTTAGTTACGCTTCCT AGAAACAAATACAAGAGGATATCATATGCTGAGTTATATGAAGCTACAGATTCATTTTCC GATTCAAATCTGGTTGGTCGTGGAAGATTTGGTACTGTATATAAAGGAATTCTACATGAT GACAGTAATACAGAAACTGTAGCAGTAAAGGTACTCGATCTTAAGCAACAAGGAGCTAGT AGGACCTTCTTTACTGAGTGTGATGCCCTCAAAAGAATTAAACATCGTAAACTGGTCAAG GTTATAACTGTGTGCGACAGCTTGGATAACAACGGTGATGAATTCAAGGCGCTTGTGCTG GAATTCATTCCCAATGGAACCTTGGATGAATGGTTGCACCCAAGTGCACTTGTCACCAAC AGAGCAACTGGGAGTCTAAGCATCATTCAGAGGTTAAACATCGCTCTTGATGTGGCAGAA GCATTGGCATATCTTCATCACCACAGCAATCCATCAATTGTCCACTGCGATATTAAACCA AGCAACATTCTACTTGATGAAAATATGACTGCACATGTTGGTGACTTTGGTTTAGCAAGA ATTCTAAACATGGATGCATGTGAACATAATTCTGGTGGAAGTAGCTCGGCTGGAATTCGA GGCACAATTGGGTACCTTGCACCAGAGCATGCCATGGGACTCAGAGTTGGTGTAGAGGCC GAGGTATACAGCTATGGAGTGCTGCTGATGGAGATACTTACTAAACTAAGACCAACAGAT CATATGTCTTTTGATGGGGCCACAAGCCTTGTAAAGCATGTCGAGATGGCATACCCTTAC AGGCTGCTGGAAATACTGGATGATATAATGCTACAAGGAAGCACAAGTCACAGCACACAA GAGACGATGGATATGGTCATCATTCCTGTCGTGAGAATAGGACTAGCTTGTTGCAGGACT GCTGCAAGCCAGCGAATTAGGATGGACGAGGTGGTGAAAGAACTCAATGACATTAAGAAG ACATGGGAAGACCATTTCGCAGAAATCACCGGGGCAACCGGCAGAGCGGCGGATGGACGA GCAATCCATTGA

Peptide Sequence

PEP ID	Zm00001d048741_P133
PEP Infomation	pep chromosome:B73_RefGen_v4:4:4812820:4825077:1 gene:Zm00001d048741 transcript:Zm00001d048741_T133 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP107
Sequence	MVVSTLCSSLPLLPNIIVLLLFTTISDSTNSNSDLNALLSFKSLITKDPMGALSSWDGDA SNRSAPHFCRWNGVTCSSHQHGSHVTALRLRAFGLEGNISQSLGNLSHLQTLDLSNNNLE GEIPSSIGNLFALHFLNLSVNHLSGNVPQSIGRLSELEILNFRDNDIVGSIPSSVLNLTG LTMLSATENYMTGRIPDWLGNLTDLTDLNLAWNNFSGQIPQALGKLPNLARLTMQGNQLE GLISPTLFNISSLENLNLGYNKLSGSLPPNIGFTLPNIVAFSVCYNKFEGPVPSSLSNIS VLQQLILHGNRFHGRIPPNIGVHGSLTNLELGNNQLQVVDTKDWDFLTPLVNCSHLKYLN LELNNISGILPNAVSNLSYELEALLMGGNQITGTVPSGIGRLQKLQILDLSDNLFSGAVP SSIGKLSSLDSLVLFSNKFDGEIPSSLGNLTKLTELVLHSNDLHGSMPPSLGNMTILESI DLSYNRLSGQIPQEILSMYSLTKFLNLSNNFFSGPISQQIRLLISLGTMDLSSNNLSGEI PHTLGSCVTLQFLYLQGNLLQGQIPVELNALRGLEVLDISSNNLSGPIPDFLGDFQVLKK LNLSFNNLSGPVLDRGIFHNNATSVSLSGNAMLCGGPGFFQLPPCSTQATYGRSNHQRMH VLAFSFTGALVVFVCITVCYFMKRASDKASDAEHGLVTLPRNKYKRISYAELYEATDSFS DSNLVGRGRFGTVYKGILHDDSNTETVAVKVLDLKQQGASRTFFTECDALKRIKHRKLVK VITVCDSLDNNGDEFKALVLEFIPNGTLDEWLHPSALVTNRATGSLSIIQRLNIALDVAE ALAYLHHHSNPSIVHCDIKPSNILLDENMTAHVGDFGLARILNMDACEHNSGGSSSAGIR GTIGYLAPEHAMGLRVGVEAEVYSYGVLLMEILTKLRPTDHMSFDGATSLVKHVEMAYPY RLLEILDDIMLQGSTSHSTQETMDMVIIPVVRIGLACCRTAASQRIRMDEVVKELNDIKK TWEDHFAEITGATGRAADGRAIH

Transcript Sequence

Transcript ID	Zm00001d048741_T133
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:4812820:4825077:1 gene:Zm00001d048741 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP107
Sequence	AAGGGGCCCAACTTCTTCCTGATGACAAGAAGCAAGATGAATTGCTTCTAGAAGATATAT GGACTCTTTTAAGAGCAGGAAGATTAGAAGAGGCATCTGACTTGTGCCGTTCTGCTGGCC AGGCATGGAGAGTTGCCACTCTTTGTCCTTTTGGCGGCATAAATATGTTCCCTTCCCTGA ATGCATTGCACAAAAATGGAAAGTACAGAACACTACAAGCCATGGAATTAGAAAGTGGTG TTGGGCGGCAGTGGCGTCTTTGGAAATGGGCATCATATTGTGCTTCAGAGAAAATCGCTG AGCAAGATGGAGGCCGTTATGAGATGGCTGTATATGCTTTACAATGCAGTAACTTAAAGC GTGTCTTGCCAATCTGTACTGACTGGGAGTCAGCTTGTTGGGCAATGGCAAGATCCTGGC TAGATGTTCAAGTGGATCTAGAATTATCTCAGTACCAAACAAGTAGACCAGAAAAGCAAC TTGATGACGACATGAATGGAGCCCAAAGTTCAGTTGGTCCAGAAAGTTGGCCATACCATG TTCTTGATCAGCAACCTCATGATTTAACTGCTCTTCTGCAGAAACTCCACTCAAGTGACC TTGTTCATGAAACTGTCTCTCGAGCATGCCGAGAGCAGCATCGACAAATTCAGATGAATC TCATGAGTGGAAATATATCTCATCTTCTTGACCTTCTATGGTCATGGTTATCACCTGCTG AAGAGAACCATAATAATACTGCAAGGCCCCTTGATGACCCTGAGATGATACGGTTCGGGG CGCATATTGTTCTTGTGCTGAGGCACCTTTTCAGTGATGGGATGGATGATGAGTTAGATG AAAAACTGGTTACTGTCGGTGATCTCATCATCAACATGTACGTGAGGTATTTGTTCTCAG AGGATCAAGAGGAGTTGGTTGGAATATATGCCTCACAGCTTCAACATGACCTTTGCATTA CTTTGTTTGTAGAAATGATGGAACTAAGGTTAAATAGCAGTTTGCATACTATGTACAAGC TCTTCCTTTCTGCTGTGGAGTATCTGCCATTCTCATCTGATAATGTATCCAAGGCTTGTT TTGAAGAGATCATCGAGAGGGTGCTTTCAAGATCTCGGCAAACAAAACCCACTAAGTATG ATGGGGATTTCTCTGATGTTGCGCATCAACATCACCTGCAATCACTTCAAAAGGCTATGG TTATTCAGTGGCTTTGCTTCACACCACCATCCTCGATTCCAGACTTTCAAATGATCAGTT GGAAGCTTCTGATACGGGCATTGACACATAGCAATACACTGTTCAGGGAGTTTTCTCTGA TATCAATGAGGAGAGTCCCTGAGCTACCAGCAGGGCCACACAAGTTGCTTGCCATTTTAG CTGAACCGTTAAAGCAAAAAGAAAATTTAATTTCACGGGAAGATCCGGAGGTATCTGATA ACTTGCCGGAGTTTGAAGATTGGCATGAATATTACTCCCTTGACGCGACTTACCGCAGTT GGCTTAAAATTGAGATGATGAATGCCGCTGTTTCTCCTGAGATGCTTTCGGCAGAGGAAA AGGGTCAAGCTGTTGCTGCAGCTAAAGAAACACTGAACTTGGCATGTTCGTTACTACGCA GGGATGGAAGACCATGGCTGTATGCTGTCGAGAGCAGTCCATTTGAATCCCCCGATGTTA TTTTCCTTGAGCTGCATGCTTCTGCAATGCTCTGCCTACCTTCTGGAGAATGTATGTTAC CAGATGCAACATCATGCACAGCTTTGACAAGTGCACTATATTCAACTGTCAGTGAAGATG ATGTGCTGCATCGCCTGTTGAAGGTGGATGTCCAGGTCTCTTCTAGAGACCCCTGCTGTA TTGAAGTTGCTCTTCGCTGCTTAGCAGCAGAAGGTGATGGATATGGGCTTCATGAAGCCA ACGATGGAGGTCTTCTTGCTGCAGTCATGGCTGCTGGCTTTAAAGGTGAACTCAGTCGGT TCCAACCTGGAGTTTCGATGGCAATTTCACGGCTTGATGCTTGGTATTCTGACCGGAGTG GTTCCGTGGAGAGCACCGCTGCTTACATAATTCGAGGGCTGTGTCGGAGGTGCTGCCTTC CTGAAACAATTCTAAGATCTATGCAGGCATGTATCGCACTCTCCGCGGCTGGTGATGATC TAGATTACTCTCTAGATAAATGTGACGAACTTGTTGAGTTAGTTGGTTCAGCCGAGTCTG GAATGATGCATTTGTTCAGCCAGCAGCAGTTGCAGGAGTTCCTGATTTTCGAGAGGGAAT ATCTCATATGTACAATGGAGTTTGAGGAGGACCGGTTGCCTTGTGATGGCTAAGCTTTTT CCCCACTTGCTGACTAATCCATGAGACATGACCGGCATGTGCATTTTGTGGCGCCGTGAC CCAAGAACCTGCTGTGATGTATCGCTACACCATTTCAAAGCGAAAAGATGGAATTTAGTG CGTAACGTGGTTCTGCCCGTTTGTGCACGAGAATTGGCCCGTTTTGGAGAGTCAATATAA GATTATTCAAGTCGAAATCCAAGATTTTTGTTCATGATAAAAACAATGTTCGGCAAGCCT TTTTGTCCCGCCCGTGCTACCCGCACTCCGCCTCGGCCGCTTTTGCATCGATCTGCCGTC CCTGGACACGCTGCACCTGACAATTGTCACCGGTAGCCTCGTCGACTTGATACTCGAATC TAACCGCGCTCTCCGTCCACGGAAACATTTGAACGCTATTATGTGGATCTAACCGCGCTG TTCAATGGACATATCATCTGATGAATTTGATAATCTTCTTTCTCTTTACCGGTCTTCCTC AGCATCCTCTCAAGTCAACTCACAGAACGACTTCGTTTCCTGACTTCTGAGCACTGCCTG GACGCAGTATGACAAGCCGACAACGACCAGGTGGCTAAACAAGTTCCAATTCCTACTCAA AGCCTCATATTCATAAAAGGCGGCTAAAGAAGTTCCAATAAAGAAGAACACCCAATTCCA TCGATCTTGACTCTTGTTCCCAATCCGGGCTATAAAGAAGAATATCCATTGATGGTGGGT GTTGACCAAACTGCAAGGTTTCTGTGAGTTACTAGCATATATATAGGTTTGCAAGTAGTT TGGGTTACCATCAAATATTTCTGCAGTTCCATCCCAAAGGCTGCGAAGGCGCACACAAGC CAAGTTCTACTCAACATCGTTCCCTAATCATGGTAGTAAGCACACTCTGCAGCAGCTTGC CACTTCTACCCAACATCATCGTCCTCCTCTTGTTCACAACCATTTCCGACTCCACGAACA GCAACAGCGATCTCAATGCACTCTTGTCATTCAAATCCCTCATAACAAAGGACCCAATGG GTGCACTGTCATCTTGGGATGGGGACGCTTCTAACAGGAGCGCTCCTCATTTCTGCCGGT GGAACGGCGTGACGTGCAGCAGCCACCAGCACGGCAGCCATGTCACTGCCTTGCGCCTGC GAGCCTTCGGTCTGGAAGGCAACATCTCCCAGTCGCTTGGGAATCTTAGCCACCTCCAAA CCCTGGATCTGTCGAACAACAACCTAGAAGGCGAGATACCTTCCAGTATCGGTAACTTGT TTGCTCTCCATTTTCTCAACCTAAGTGTTAACCACCTGTCCGGGAACGTTCCTCAGTCCA TCGGCCGTCTTTCCGAACTCGAAATTCTGAATTTCCGCGACAATGACATCGTAGGAAGCA TTCCTTCTTCAGTGCTCAACCTTACAGGACTCACAATGCTTAGTGCCACCGAAAATTACA TGACAGGGAGGATTCCAGATTGGTTGGGAAACTTGACGGATCTGACAGATTTGAACTTGG CATGGAATAACTTCAGTGGACAGATCCCACAAGCTTTAGGTAAGCTACCTAACCTTGCTA GATTGACTATGCAAGGTAATCAATTGGAAGGTTTAATCTCTCCTACACTGTTTAACATTT CATCCCTTGAGAATTTAAATCTCGGCTATAACAAGCTTTCAGGTTCTCTACCTCCAAATA TTGGATTTACACTTCCAAATATTGTAGCATTTAGTGTATGCTATAACAAATTTGAGGGTC CAGTTCCATCCTCCCTGTCCAATATTTCTGTGCTCCAACAGCTCATCCTCCACGGGAACA GATTTCATGGCCGAATTCCACCTAATATTGGTGTCCACGGCAGCTTAACTAATCTTGAAT TAGGCAACAATCAGCTTCAAGTCGTGGATACTAAAGATTGGGATTTTCTAACCCCTTTGG TGAATTGCAGTCATCTTAAATATCTTAATCTTGAGCTAAATAACATTTCTGGCATTTTGC CAAATGCTGTTTCTAATCTCTCCTATGAGCTGGAAGCGTTACTGATGGGTGGAAACCAAA TAACCGGGACCGTACCTTCAGGGATAGGTAGGCTTCAAAAGCTCCAAATACTTGATCTGT CAGATAACCTGTTTTCAGGCGCCGTACCTTCGAGTATAGGTAAACTCTCCAGCCTAGACA GCCTTGTGCTATTCAGTAATAAATTTGACGGGGAGATCCCTTCATCACTTGGAAATCTTA CAAAACTAACCGAGCTAGTTTTACATTCCAATGACCTGCATGGGAGCATGCCTCCAAGCC TTGGTAATATGACAATCTTAGAATCCATCGACCTTTCATATAACCGCCTCAGTGGCCAAA TTCCCCAAGAGATCTTAAGCATGTATTCCCTTACAAAATTTCTAAATCTCTCCAACAATT TTTTCAGCGGACCCATTTCCCAACAGATCAGGCTCTTGATCAGTCTTGGTACAATGGATC TCTCAAGCAATAATTTATCTGGTGAGATTCCACATACCCTTGGTAGCTGTGTTACACTGC AGTTCCTGTATTTGCAAGGAAACCTCCTACAAGGTCAAATACCAGTGGAACTGAATGCAC TAAGAGGCTTAGAAGTTTTGGATATCTCAAGCAACAACCTGTCAGGACCCATTCCTGATT TTCTTGGTGACTTCCAAGTTCTCAAGAAGCTGAACCTATCATTCAATAACCTATCTGGTC CGGTGCTTGATCGAGGTATCTTCCACAATAATGCCACCTCTGTTTCACTTTCTGGTAATG CCATGCTTTGTGGAGGGCCTGGTTTCTTTCAACTTCCACCATGCTCAACTCAAGCAACCT ATGGCCGTTCCAATCATCAACGAATGCATGTCTTGGCCTTTTCCTTTACTGGAGCTTTAG TAGTCTTTGTGTGCATCACTGTATGCTACTTCATGAAAAGGGCATCTGACAAAGCAAGTG ATGCTGAGCATGGGTTAGTTACGCTTCCTAGAAACAAATACAAGAGGATATCATATGCTG AGTTATATGAAGCTACAGATTCATTTTCCGATTCAAATCTGGTTGGTCGTGGAAGATTTG GTACTGTATATAAAGGAATTCTACATGATGACAGTAATACAGAAACTGTAGCAGTAAAGG TACTCGATCTTAAGCAACAAGGAGCTAGTAGGACCTTCTTTACTGAGTGTGATGCCCTCA AAAGAATTAAACATCGTAAACTGGTCAAGGTTATAACTGTGTGCGACAGCTTGGATAACA ACGGTGATGAATTCAAGGCGCTTGTGCTGGAATTCATTCCCAATGGAACCTTGGATGAAT GGTTGCACCCAAGTGCACTTGTCACCAACAGAGCAACTGGGAGTCTAAGCATCATTCAGA GGTTAAACATCGCTCTTGATGTGGCAGAAGCATTGGCATATCTTCATCACCACAGCAATC CATCAATTGTCCACTGCGATATTAAACCAAGCAACATTCTACTTGATGAAAATATGACTG CACATGTTGGTGACTTTGGTTTAGCAAGAATTCTAAACATGGATGCATGTGAACATAATT CTGGTGGAAGTAGCTCGGCTGGAATTCGAGGCACAATTGGGTACCTTGCACCAGAGCATG CCATGGGACTCAGAGTTGGTGTAGAGGCCGAGGTATACAGCTATGGAGTGCTGCTGATGG AGATACTTACTAAACTAAGACCAACAGATCATATGTCTTTTGATGGGGCCACAAGCCTTG TAAAGCATGTCGAGATGGCATACCCTTACAGGCTGCTGGAAATACTGGATGATATAATGC TACAAGGAAGCACAAGTCACAGCACACAAGAGACGATGGATATGGTCATCATTCCTGTCG TGAGAATAGGACTAGCTTGTTGCAGGACTGCTGCAAGCCAGCGAATTAGGATGGACGAGG TGGTGAAAGAACTCAATGACATTAAGAAGACATGGGAAGACCATTTCGCAGAAATCACCG GGGCAACCGGCAGAGCGGCGGATGGACGAGCAATCCATTGATGGAAGGTGGCACAAGCGC AATGGCAAAGCACACGCCCAGCCTGTGCACTTGCCAGCTTGCTCCGAATAGAGAGAGACA GCCTACACACGGCTGCTGGTTCTACTCAGTATTTTGCCTAGAAAATTGAGATCCAGTTAT ATGTATATGTTATATGGGTACTTGTTGAATATTGCAACCAAAACATGTTATGGTAAACAC ATTATTT