Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048727_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:4318415:4319363:1 gene:Zm00001d048727 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1U4
Sequence

ATGTGCGAGGAGAAGAAGTCAGGGGGCGGCAGCGCCAATAAGTGGCGGCACCCTGTGAGC
CTCGTCTTCCGTATCGCCGGCATCGCGATGGCCGTGGCGGCGGCAGCGGTCATGGCGGCG
GCGAGCCAGTGCACGGTCTACGCCGACTACGACTACGGCGCGCGCCCGAGCACCGTCACG
TACAGCGACTTCCCTGCCTTCGTGTACCTGGTGGCGGCGACCTCCATCGCGGCGCCACTG
GAGGCGGTGGCGCTGTTCCTCAGCGTTAGCAAGAAGGGCAAGAAGGGCCTCCTCAGGGTG
CTCATGCCGCTCCTCGGCGCCGCCGCGCCGGCGCTGCTCTACTCGTCTGCCGGCGCGGCG
TTCGCCGCCGGCTGGGACGTCTACTACTACTCGGAGTCGGAGCCCAGCGCCGGCGGCGGG
CGGCGCTTCAGCGTCTGCCGCAGTAGCGCCGGCGCCCGCTTCTGCGGGCAGGTGCACGTG
TCCATGTGGCTCGCGCTCGGCGCCGCCGTGGCCGTGTCCGTCGCTGAGTGCCTCACCACG
TTGCTGTGGTCCGCCAGCTCCGACTCTGACTCGGCCGACTCTGACTCGGACGACTCTGTT
TGTGGGCATGGGTGCCATTGCAAGCATTAG

Peptide Sequence

PEP ID

Zm00001d048727_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:4318415:4319363:1 gene:Zm00001d048727 transcript:Zm00001d048727_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1U4
Sequence

MCEEKKSGGGSANKWRHPVSLVFRIAGIAMAVAAAAVMAAASQCTVYADYDYGARPSTVT
YSDFPAFVYLVAATSIAAPLEAVALFLSVSKKGKKGLLRVLMPLLGAAAPALLYSSAGAA
FAAGWDVYYYSESEPSAGGGRRFSVCRSSAGARFCGQVHVSMWLALGAAVAVSVAECLTT
LLWSASSDSDSADSDSDDSVCGHGCHCKH

Transcript Sequence

Transcript ID

Zm00001d048727_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:4318415:4319363:1 gene:Zm00001d048727 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1U4
Sequence

ATGTGCGAGGAGAAGAAGTCAGGGGGCGGCAGCGCCAATAAGTGGCGGCACCCTGTGAGC
CTCGTCTTCCGTATCGCCGGCATCGCGATGGCCGTGGCGGCGGCAGCGGTCATGGCGGCG
GCGAGCCAGTGCACGGTCTACGCCGACTACGACTACGGCGCGCGCCCGAGCACCGTCACG
TACAGCGACTTCCCTGCCTTCGTGTACCTGGTGGCGGCGACCTCCATCGCGGCGCCACTG
GAGGCGGTGGCGCTGTTCCTCAGCGTTAGCAAGAAGGGCAAGAAGGGCCTCCTCAGGGTG
CTCATGCCGCTCCTCGGCGCCGCCGCGCCGGCGCTGCTCTACTCGTCTGCCGGCGCGGCG
TTCGCCGCCGGCTGGGACGTCTACTACTACTCGGAGTCGGAGCCCAGCGCCGGCGGCGGG
CGGCGCTTCAGCGTCTGCCGCAGTAGCGCCGGCGCCCGCTTCTGCGGGCAGGTGCACGTG
TCCATGTGGCTCGCGCTCGGCGCCGCCGTGGCCGTGTCCGTCGCTGAGTGCCTCACCACG
TTGCTGTGGTCCGCCAGCTCCGACTCTGACTCGGCCGACTCTGACTCGGACGACTCTGTT
TGTGGGCATGGGTGCCATTGCAAGCATTAGGCTATAGCTGCGCCATTTTGTTTGCTTCTA
AATTTGTTGATAAATCAACGAATGTATGCTTGCTTGTGTGGTTCATATATGGAATATGAT
TCAAATATTGGCATGTAGCCTTTTTTCCGTTTAAAAGAAAACAAATATTAATATGTTTGA
GTTGGAAAGAAAGAAAAATGATTCA