Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048697_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:4:3464674:3467995:-1 gene:Zm00001d048697 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS-transcription factor 40 description:Putative MADS-box transcription factor family protein
Sequence	ATGCAATCCAATTGCCTTGCTCTGGACGCCGCGCCAAGGAAGAAGACGACCCGTTGGGCT TGCGACCCAGACACGGCGGTGGCGATCGGTGTGATCTCAGCTCTCACTCTTCTTGTCGTC GTCCTCGCGATGGGGAGGGTGAAGCTGAAGATCAAGAGGCTGGAAAACAACAGCGGGAGA CAGGTGACGTACTCCAAGCGGCGATCGGGCATCCTCAAGAAGGCTAAGGAGCTCTCCATC CTATGTGACATCGACCTAATGCTTATAATGTTCTCGCCCACGGACAAACCCACCATATGC ATTGGCGATAGAAGTACCCTCGAGGAAGTTGTAGCGAAATATACACAGTTAACCCCTCAG GAGAGAGCTAAAAGGAAACTGGAGAGCTTAGAGGCTCTAAAGAAGACTTTCAAGAAACTA GACCACGATGTAAATATTCAAGACTTTCTAGGCTCGCGGGTTCAGACAGTCGAGGAGCTA TCAGCAGAGCTTGTCTCGTTGCAGGGTCAGGTGGCGGAGCTTCAAAAGCGTGTCAGTGAT TGGAGCGATCCTGAGAAAGTTGACAATATCGACAATATAAGAGCAATGGAGCAATCTCTC AAAGAAACTATTAATCATATCCAAATCCATAAGGGGAACTTCGGAAAGCAACATCTAATC GGGCTACAGTATGCTGCTACCCAGTTCCAGACCGACATGCAGTTGCCTCTAGGACTGCCC GGCGAGTCAGGCCCTTCGTCGTGGTTCCAAAACGGCGGCGCTGATGGGCAACAAGCCATG ATGCTAACGGACGAGTCCGGCCTGCTCCATCAGAGAGACATTGCGCAGGGCTATCCAAGC TACTTCAGCACGGTCAAGCAGGATCCCGACACCGGTGGTAGCAGCAGTGATCACGGGCAG GTGGTGCTTCACCATCCGCAGCCGCCCGACTTCAGCCAGACCGAGTGCCTGACGTCGCTG CACCTGCCGTCGCAGCAGTTCCCGTACCCACCCTTCGACCACCACGGCCTTTACAGCGAC CGAATTTTCAGGCCAGACGCAGTTGAGCTGCACGCCGGCGGCGTCGCCAGTATGGACTTT CTCAGCGGTCAGTACGACTTGCCGAGGCCTGGCGATGATGCCAGCTTCCATAACTGGGCG TCAGCTGCAGCATGTAGTGCAACCATGTTCGACCAGCAACAGCAACAGCAGCATCAGCAT CACCAGCAACCACAATCTTCACCTGCACAACAACAACTCTAG

Peptide Sequence

PEP ID	Zm00001d048697_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:4:3464674:3467995:-1 gene:Zm00001d048697 transcript:Zm00001d048697_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS-transcription factor 40 description:Putative MADS-box transcription factor family protein
Sequence	MQSNCLALDAAPRKKTTRWACDPDTAVAIGVISALTLLVVVLAMGRVKLKIKRLENNSGR QVTYSKRRSGILKKAKELSILCDIDLMLIMFSPTDKPTICIGDRSTLEEVVAKYTQLTPQ ERAKRKLESLEALKKTFKKLDHDVNIQDFLGSRVQTVEELSAELVSLQGQVAELQKRVSD WSDPEKVDNIDNIRAMEQSLKETINHIQIHKGNFGKQHLIGLQYAATQFQTDMQLPLGLP GESGPSSWFQNGGADGQQAMMLTDESGLLHQRDIAQGYPSYFSTVKQDPDTGGSSSDHGQ VVLHHPQPPDFSQTECLTSLHLPSQQFPYPPFDHHGLYSDRIFRPDAVELHAGGVASMDF LSGQYDLPRPGDDASFHNWASAAACSATMFDQQQQQQHQHHQQPQSSPAQQQL

Transcript Sequence

Transcript ID	Zm00001d048697_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:3464674:3467995:-1 gene:Zm00001d048697 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS-transcription factor 40 description:Putative MADS-box transcription factor family protein
Sequence	ACCGTCTGCGCGCCGGCCGGCGGTCCGCCACTCTGTCCCGTCCGATTTCACGTCGCAGAA GCAAGAGAGACAAGCGTCGCATGCAATCCAATTGCCTTGCTCTGGACGCCGCGCCAAGGA AGAAGACGACCCGTTGGGCTTGCGACCCAGACACGGCGGTGGCGATCGGTGTGATCTCAG CTCTCACTCTTCTTGTCGTCGTCCTCGCGATGGGGAGGGTGAAGCTGAAGATCAAGAGGC TGGAAAACAACAGCGGGAGACAGGTGACGTACTCCAAGCGGCGATCGGGCATCCTCAAGA AGGCTAAGGAGCTCTCCATCCTATGTGACATCGACCTAATGCTTATAATGTTCTCGCCCA CGGACAAACCCACCATATGCATTGGCGATAGAAGTACCCTCGAGGAAGTTGTAGCGAAAT ATACACAGTTAACCCCTCAGGAGAGAGCTAAAAGGAAACTGGAGAGCTTAGAGGCTCTAA AGAAGACTTTCAAGAAACTAGACCACGATGTAAATATTCAAGACTTTCTAGGCTCGCGGG TTCAGACAGTCGAGGAGCTATCAGCAGAGCTTGTCTCGTTGCAGGGTCAGGTGGCGGAGC TTCAAAAGCGTGTCAGTGATTGGAGCGATCCTGAGAAAGTTGACAATATCGACAATATAA GAGCAATGGAGCAATCTCTCAAAGAAACTATTAATCATATCCAAATCCATAAGGGGAACT TCGGAAAGCAACATCTAATCGGGCTACAGTATGCTGCTACCCAGTTCCAGACCGACATGC AGTTGCCTCTAGGACTGCCCGGCGAGTCAGGCCCTTCGTCGTGGTTCCAAAACGGCGGCG CTGATGGGCAACAAGCCATGATGCTAACGGACGAGTCCGGCCTGCTCCATCAGAGAGACA TTGCGCAGGGCTATCCAAGCTACTTCAGCACGGTCAAGCAGGATCCCGACACCGGTGGTA GCAGCAGTGATCACGGGCAGGTGGTGCTTCACCATCCGCAGCCGCCCGACTTCAGCCAGA CCGAGTGCCTGACGTCGCTGCACCTGCCGTCGCAGCAGTTCCCGTACCCACCCTTCGACC ACCACGGCCTTTACAGCGACCGAATTTTCAGGCCAGACGCAGTTGAGCTGCACGCCGGCG GCGTCGCCAGTATGGACTTTCTCAGCGGTCAGTACGACTTGCCGAGGCCTGGCGATGATG CCAGCTTCCATAACTGGGCGTCAGCTGCAGCATGTAGTGCAACCATGTTCGACCAGCAAC AGCAACAGCAGCATCAGCATCACCAGCAACCACAATCTTCACCTGCACAACAACAACTCT AGCAACTGCCTCGTTCGATCACGCCGTTTATCACAGTTCATCTCAGCACCAACAAGTCAT GATCGGTTGATCCTATATATGGTAAAAAAATCGGAGATAATATTGCCCTCCAAAAGGTGC TACCCTAAACTAATCATCAATGCAAAATGTGTATAGGCAACACTGTCGATGTAAAATATA TATTTATTGTAGCTAATTCTTTCTTGTAAGTATCTATCTGTCTCCTGTATACTACTGGTA TAGCTTTCATAAAAGGATTGGGCACTTAACTATTAGTTCATAGGCATTCATCTTTGCATG AATGAATATATTTGAAATTTTGGCCACCATGCATGGCCTTTCCTTTATTGTACTGGTTCA CTTGAATCTCTCTTTTTAATATAATGATGATATGCAGTTCTCCTGCATGTT