Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048696_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:3440984:3444303:1 gene:Zm00001d048696 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	ATGAATGGCGGGCGGGCCCTGATCGCCACCGCTGGAGATCTTGTGGTGACGGACGGTGGT GCGACTCCGACTCCCATGCGCCTGCGCTGTGGGTTTTTGGTTCCGGTCGTCCTGGCATTG GTGCTGGCCGCCGCGCTCGGCCCGGCCACGGCCCCGGCCCCGGCGCGCGCCCAGCTGCGG CGGGACCACCAGGCGCCGCCGGGCCCGCGCCCGCACAGCGTCACCATCACCGAGTTCGGC GCCGTCGGGGACGGCAGGACGCTCAACACGGTCCCCTTCCAGAACGCCGTCTTCTACGTC CGCTCCTTCGCCGACAAGGGCGGCGCGCAGCTGTACGTGCCCAGGGGCCGCTGGCTCACC GGCAGCTTCAACCTCACCAGCCACCTCACCCTCTACCTGGAGGAAGGCGCCGTCATCGTC GGCGCAAAGGACTCATCACAATGGCTGATCGTTGAACCTTTGCCATCTTATGGCCAAGGG CTAGACCTTCCTGGTCCTAGACATCAAAGCTTGATCAGCGGATACAACTTAACTGATGTT GTCATAACTGGGAACAATGGAGTTATTGATGGCCAGGGCTTGGTATGGTGGCAGTGGTTG CGCTCCCATGAGCTGAACCATAGCCGACCCAACCTTCTGGAGTTCCTGTATTCTGAAGAT ATTGTCATCTCAAACTTGACATTCTTAAATTCACCAGCCTGGAGCATACACCCGGTGTAC TGCAGGTGCAGCGCAATTAACTTAGCTTTGTGTGTCCACAATGTGACGATTAAGACCTCA TTGGACGCTCCACTGACTGATGGCATAGTTCCAGATTCATGTTCAAACTTATGCATTGAG GACAGCACCATAAGTGTCAGCCATGAAGCCATCTCCCTGAAAAGCGGGTGGGACAGGTAT GGCATTTCCTTCGGGAGGCCTACCTCCGACATTCGCATCAGCAGAGTGGACCTGCTATCA TCTTCCGGAGCCGCTCTTGCATTCGGGAGTGAGATGTCTGGTGGTATCTCAGACATTCAT GTTAACCACCTCCGGATCCACGACTCCTCCAAAGGTATTTCTTTCAAGACCTCACCCGGC CGTGGGGGTTACATCGAGGACGTGGTCATCTCGGAGGTACAGATGGAAAATGTGCATGTC GGCATCGAGTTCACCGGCAACTGCTCGACCCACCCAGATGACAGCTTCGATCCGTCCGAC CTCCCGGCGATCGACCATGTCACCATGAAGAACATGGCCGGCACGAACATCTCGGTCGCC GGAGTTTTGTCGGGAATCGAAGGAGCCCCATTCACAGCCATCTGCCTTTCCAACCTTAAC TTCTCTATGGCTGCCGGTTCTGGTCCGAGTTCCTGGTCTTGCTCCGACGTTTCCGGCTAC TCCGAGGCGGTCTTTCCTGAACCCTGCACAGAGCTCCGTGATCCGTCCTCCAGCTCTTCC GTCTGCTATTCCCTGGCCAGCTACAGCGCCATTGAAACAGCATAA

Peptide Sequence

PEP ID	Zm00001d048696_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:3440984:3444303:1 gene:Zm00001d048696 transcript:Zm00001d048696_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	MNGGRALIATAGDLVVTDGGATPTPMRLRCGFLVPVVLALVLAAALGPATAPAPARAQLR RDHQAPPGPRPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLT GSFNLTSHLTLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDV VITGNNGVIDGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVY CRCSAINLALCVHNVTIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRY GISFGRPTSDIRISRVDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGISFKTSPG RGGYIEDVVISEVQMENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVA GVLSGIEGAPFTAICLSNLNFSMAAGSGPSSWSCSDVSGYSEAVFPEPCTELRDPSSSSS VCYSLASYSAIETA

Transcript Sequence

Transcript ID	Zm00001d048696_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:3440984:3444303:1 gene:Zm00001d048696 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	ATGAATGGCGGGCGGGCCCTGATCGCCACCGCTGGAGATCTTGTGGTGACGGACGGTGGT GCGACTCCGACTCCCATGCGCCTGCGCTGTGGGTTTTTGGTTCCGGTCGTCCTGGCATTG GTGCTGGCCGCCGCGCTCGGCCCGGCCACGGCCCCGGCCCCGGCGCGCGCCCAGCTGCGG CGGGACCACCAGGCGCCGCCGGGCCCGCGCCCGCACAGCGTCACCATCACCGAGTTCGGC GCCGTCGGGGACGGCAGGACGCTCAACACGGTCCCCTTCCAGAACGCCGTCTTCTACGTC CGCTCCTTCGCCGACAAGGGCGGCGCGCAGCTGTACGTGCCCAGGGGCCGCTGGCTCACC GGCAGCTTCAACCTCACCAGCCACCTCACCCTCTACCTGGAGGAAGGCGCCGTCATCGTC GGCGCAAAGGACTCATCACAATGGCTGATCGTTGAACCTTTGCCATCTTATGGCCAAGGG CTAGACCTTCCTGGTCCTAGACATCAAAGCTTGATCAGCGGATACAACTTAACTGATGTT GTCATAACTGGGAACAATGGAGTTATTGATGGCCAGGGCTTGGTATGGTGGCAGTGGTTG CGCTCCCATGAGCTGAACCATAGCCGACCCAACCTTCTGGAGTTCCTGTATTCTGAAGAT ATTGTCATCTCAAACTTGACATTCTTAAATTCACCAGCCTGGAGCATACACCCGGTGTAC TGCAGGTGCAGCGCAATTAACTTAGCTTTGTGTGTCCACAATGTGACGATTAAGACCTCA TTGGACGCTCCACTGACTGATGGCATAGTTCCAGATTCATGTTCAAACTTATGCATTGAG GACAGCACCATAAGTGTCAGCCATGAAGCCATCTCCCTGAAAAGCGGGTGGGACAGGTAT GGCATTTCCTTCGGGAGGCCTACCTCCGACATTCGCATCAGCAGAGTGGACCTGCTATCA TCTTCCGGAGCCGCTCTTGCATTCGGGAGTGAGATGTCTGGTGGTATCTCAGACATTCAT GTTAACCACCTCCGGATCCACGACTCCTCCAAAGGTATTTCTTTCAAGACCTCACCCGGC CGTGGGGGTTACATCGAGGACGTGGTCATCTCGGAGGTACAGATGGAAAATGTGCATGTC GGCATCGAGTTCACCGGCAACTGCTCGACCCACCCAGATGACAGCTTCGATCCGTCCGAC CTCCCGGCGATCGACCATGTCACCATGAAGAACATGGCCGGCACGAACATCTCGGTCGCC GGAGTTTTGTCGGGAATCGAAGGAGCCCCATTCACAGCCATCTGCCTTTCCAACCTTAAC TTCTCTATGGCTGCCGGTTCTGGTCCGAGTTCCTGGTCTTGCTCCGACGTTTCCGGCTAC TCCGAGGCGGTCTTTCCTGAACCCTGCACAGAGCTCCGTGATCCGTCCTCCAGCTCTTCC GTCTGCTATTCCCTGGCCAGCTACAGCGCCATTGAAACAGCATAAATGTCCATCCATCCT TCCATCCATTTCTTGTTCTCCCCTTGAGCCTGCATCGCCGCCATCTTTTGTCTCAGTTCT TTTTTTTCCAATACACACAGACAGACCAGGAAAAAGAACAACATCACTACTCTCATGGCC CTGAGGCTCGGATCATAAGCTGCATGAATGATGACCTAGCTTGAAGGGGAAGAAGAATCA AGTGGGGGGTTGTGGACAGCTAGGTGCTTGCTTGTACAGCTACATTTCTTTATTCAATCT GTAAGAAGGAAGGATTTTTTTTTGGTTTGGTAGGTGTTGAGCGCAGAACAGTTGCTTCAT ACTATTGGCATGTGGGTATAAATTATCAAACAGCATGATTAAATTATACGTGTATATTCC ATCCCCCCTGTTGAATGATTGATTGAGAAGGCATCATCATC