Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048689_T064
CDS Infomation	cds chromosome:B73_RefGen_v4:4:3339120:3345000:1 gene:Zm00001d048689 gene_biotype:protein_coding transcript_biotype:protein_coding description:AAA-type ATPase family protein
Sequence	ATGCTTGCTTTTGAAGATAATGGATCCTCAAAAATTGGAGTCCGGTTTGACAAGCAGATC CCTGATGGTAATGATCTTGGTGGTTTGTGCGAGGAAGATCATGGCTTCTTCTGCTCTGCT GAATTACTGCGCCCAGACTTTTCTGCTGGTGAAGAAGTTGAGAGGCTAGCTATGACCGAG TTAATAGAGGTCATTTCAGAAGAGAACAAATCTGGACCTCTGATAGTGTTACTTAAGGAT GTCGAGAAATCATTCACGGGGGTTACAGAGTCACTATCATCTTTGAGGAGCAAACTTGAA TCGCTTCCACCTGGTGTTCTTATTATAGGATCCCACACCCAGATGGACAGCCGCAAAGAG AAGGCACATCCTGGAGGTTTTCTTTTCACGAAGTTTGCCAGTAGTAGCCAGACTCTTTTT GACCTTTTCCCGGATAGCTTTGGTAGCAGGTTGCATGAAAGAAGCAAAGAAAGTCCGAAA ACAATGAAACATCTAAATAAACTTTTCCCAAACAAAATTTTGATCCAGCTTCCACAGGAT GAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAAACCCTTAAAGCC AAATCAAATATTGGTAGCATTCGCATGTTTCTGAGCCGCAATGGAATTGAATGCAATGAT CTTGAAGAATTATTCATCAAAGACCAATCATTGAGTAATGAAAATGTGGACAAGATTGTT GGGTACGCAGTAAGTTATCACCTTAATCAGAATAAAATTGAAACCTCTAAGGATGCCAAA CTTGTACTCACAACTGAAAGCCTTAAGCATGGGCTCAACATGCTCCAAAGCATGCAAAAT GATAACAAGAGCTCCAAAAAATCACTGAAGGATGTTGTCACAGAGAATGAGTTTGAGAAA AGGCTTTTGGCAGATGTTATACCTCCAAATGACATTGGAGTTACCTTTGATGATATTGGA GCCTTGGAGAATGTAAAGGACACGTTAAAGGAGCTGGTGATGCTCCCTTTGCAAAGACCT GAGTTGTTCTGCAAAGGGCAGTTAACAAAGCCTTGCAAGGGGATATTGCTTTTCGGACCT CCTGGCACTGGAAAAACTATGCTTGCCAAAGCAGTAGCAACTGAAGCAGGCGCTAATTTC ATCAATATATCAATGTCGAGCATTACATCGAAGTGGTTTGGTGAAGGGGAGAAGTATGTA AAGGCTGTTTTCTCACTAGCAAGTAAAATAGCACCCAGTGTTATATTTATTGATGAGGTC GATAGTATGCTAGGAAGGAGAGAAAATCCAGGGGAGCATGAAGCGATGCGCAAGATGAAG AATGAATTTATGGTAAATTGGGATGGGTTGCGCACTAAAGATAAGGAGCGTGTGCTTGTT CTTGGTGCTACAAATAGGCCTTTTGACCTCGACGAGGCTGTGATTAGGAGGTTCCCCCGC AGGTTAATGGTAAACTTGCCCGATGCATCAAATAGGGAGAAAATTCTAAAAGTAATTTTG GCAAAAGAAGAGCTGGGATCTGATGTTGATATGGACTCGCTTGCCAATATGACTGATGGT TATTCAGGAAGCGACCTGAAGAATCTGTGTGTGACCGCGGCGCATTACCCCATCCGAGAA ATTCTGGAGAAGGAAAAGAAGGAGAAGAATTTGGCTAAAACAGAAGGTAGGCCGGAGCCT GCATTATATGGAAGCGAGGACATCCGCCCTCTTAGCATAGATGACTTCAAATCTGCCCAT GAGCAG

Peptide Sequence

PEP ID	Zm00001d048689_P064
PEP Infomation	pep chromosome:B73_RefGen_v4:4:3339120:3345000:1 gene:Zm00001d048689 transcript:Zm00001d048689_T064 gene_biotype:protein_coding transcript_biotype:protein_coding description:AAA-type ATPase family protein
Sequence	MLAFEDNGSSKIGVRFDKQIPDGNDLGGLCEEDHGFFCSAELLRPDFSAGEEVERLAMTE LIEVISEENKSGPLIVLLKDVEKSFTGVTESLSSLRSKLESLPPGVLIIGSHTQMDSRKE KAHPGGFLFTKFASSSQTLFDLFPDSFGSRLHERSKESPKTMKHLNKLFPNKILIQLPQD EALLTDWKQQLDRDVETLKAKSNIGSIRMFLSRNGIECNDLEELFIKDQSLSNENVDKIV GYAVSYHLNQNKIETSKDAKLVLTTESLKHGLNMLQSMQNDNKSSKKSLKDVVTENEFEK RLLADVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGP PGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFIDEV DSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLGATNRPFDLDEAVIRRFPR RLMVNLPDASNREKILKVILAKEELGSDVDMDSLANMTDGYSGSDLKNLCVTAAHYPIRE ILEKEKKEKNLAKTEGRPEPALYGSEDIRPLSIDDFKSAHEQ

Transcript Sequence

Transcript ID	Zm00001d048689_T064
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:3339120:3345000:1 gene:Zm00001d048689 gene_biotype:protein_coding transcript_biotype:protein_coding description:AAA-type ATPase family protein
Sequence	TGGTGGATTCACTTTTGCTGCCTGGGGCACCTTCAAAGGATCCAGAATTCCAGAAAGATG TTGGGAAGGCTGATAAATCAGGGGATAAGGCAGCTGCCGAGAAGTTTGCAATATATCAGA AGCATCGTTCTTCGTTGGCAGACACTGTTCACTTCAGGAGGCCAGCTGCACCAACTTCTA GTGTGAATGCTGATATTGTAGGAACATCCACTCTGCATTCTGCATCTCTACCAAAACAGG AATCGTCAACAGCTACATCCAAGAGTTATACTTTTAGAGAAGGTGATAGGGTGCGTTATG TGGGTCCAGCTCAACCATGCTCGTTGTCACAAAGGGGACCAAGTTATGGTTATCGAGGTA GAGTGATGCTTGCTTTTGAAGATAATGGATCCTCAAAAATTGGAGTCCGGTTTGACAAGC AGATCCCTGATGGTAATGATCTTGGTGGTTTGTGCGAGGAAGATCATGGCTTCTTCTGCT CTGCTGAATTACTGCGCCCAGACTTTTCTGCTGGTGAAGAAGTTGAGAGGCTAGCTATGA CCGAGTTAATAGAGGTCATTTCAGAAGAGAACAAATCTGGACCTCTGATAGTGTTACTTA AGGATGTCGAGAAATCATTCACGGGGGTTACAGAGTCACTATCATCTTTGAGGAGCAAAC TTGAATCGCTTCCACCTGGTGTTCTTATTATAGGATCCCACACCCAGATGGACAGCCGCA AAGAGAAGGCACATCCTGGAGGTTTTCTTTTCACGAAGTTTGCCAGTAGTAGCCAGACTC TTTTTGACCTTTTCCCGGATAGCTTTGGTAGCAGGTTGCATGAAAGAAGCAAAGAAAGTC CGAAAACAATGAAACATCTAAATAAACTTTTCCCAAACAAAATTTTGATCCAGCTTCCAC AGGATGAAGCTCTACTTACAGATTGGAAGCAGCAGTTGGATCGTGATGTTGAAACCCTTA AAGCCAAATCAAATATTGGTAGCATTCGCATGTTTCTGAGCCGCAATGGAATTGAATGCA ATGATCTTGAAGAATTATTCATCAAAGACCAATCATTGAGTAATGAAAATGTGGACAAGA TTGTTGGGTACGCAGTAAGTTATCACCTTAATCAGAATAAAATTGAAACCTCTAAGGATG CCAAACTTGTACTCACAACTGAAAGCCTTAAGCATGGGCTCAACATGCTCCAAAGCATGC AAAATGATAACAAGAGCTCCAAAAAATCACTGAAGGATGTTGTCACAGAGAATGAGTTTG AGAAAAGGCTTTTGGCAGATGTTATACCTCCAAATGACATTGGAGTTACCTTTGATGATA TTGGAGCCTTGGAGAATGTAAAGGACACGTTAAAGGAGCTGGTGATGCTCCCTTTGCAAA GACCTGAGTTGTTCTGCAAAGGGCAGTTAACAAAGCCTTGCAAGGGGATATTGCTTTTCG GACCTCCTGGCACTGGAAAAACTATGCTTGCCAAAGCAGTAGCAACTGAAGCAGGCGCTA ATTTCATCAATATATCAATGTCGAGCATTACATCGAAGTGGTTTGGTGAAGGGGAGAAGT ATGTAAAGGCTGTTTTCTCACTAGCAAGTAAAATAGCACCCAGTGTTATATTTATTGATG AGGTCGATAGTATGCTAGGAAGGAGAGAAAATCCAGGGGAGCATGAAGCGATGCGCAAGA TGAAGAATGAATTTATGGTAAATTGGGATGGGTTGCGCACTAAAGATAAGGAGCGTGTGC TTGTTCTTGGTGCTACAAATAGGCCTTTTGACCTCGACGAGGCTGTGATTAGGAGGTTCC CCCGCAGGTTAATGGTAAACTTGCCCGATGCATCAAATAGGGAGAAAATTCTAAAAGTAA TTTTGGCAAAAGAAGAGCTGGGATCTGATGTTGATATGGACTCGCTTGCCAATATGACTG ATGGTTATTCAGGAAGCGACCTGAAGAATCTGTGTGTGACCGCGGCGCATTACCCCATCC GAGAAATTCTGGAGAAGGAAAAGAAGGAGAAGAATTTGGCTAAAACAGAAGGTAGGCCGG AGCCTGCATTATATGGAAGCGAGGACATCCGCCCTCTTAGCATAGATGACTTCAAATCTG CCCATGAGCAGGT