Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048670_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:3063257:3064807:1 gene:Zm00001d048670 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCGCTCGCCGCTGGCGATCCGTCGCCTCCGCCGTCCACCGCCCACGCCATAACCACC CCAGACGGGTGGCACCCGCGCACGGCGGAGCGCCATCTGCTTCACCTCCTCCATCACTGT CCCCTAGCTCGCGGTCGCCCGCTCGAGCTCCTCGCGTTCGCCGTCCGCCGCGCGCTCCCC TACTCCCCGCCGTCACCGCACCACCACGCCCTCGCGGCGCTGCTGCTCCTGTCCTCCCCT CCGCCACCCGCTCTGCCAATCCTCCGCCTCCTCCCTCCCGAACCCACACCCCCTCTCCCG CTCCTCAACGCCGCCGTCAAGGCCCTCTCCGCCTCCTCCCCGCCGGACGATGCCTTCCGT CTCCTCTCCACCCTCCGCCAATTCCACGCGCCTGACCGCCTAACCTTCCTGCCCCTCATC GGCTGCGCCTCCTCCTTGCCGCTCCTCTACGCGCTGCACTCGCTCCTCCTCCGCCTCGGC TTCCTATCTCACCACGTCATCTCCCTCGCCCTACTCAAGCCCTACCCGCTGCCGCAGGCC CGGGTCTTGTTCGACGATATGCCCCAAAAGAACAAGTGCACCGTCGCCTACAACACCCTC ATCACGGCGTGCCTCAGGGTCAGGGACATCCGTGCAGCGCGCCACCTGTTCGACGAAATG CAGTGGCACAGGCGGTCCAGGAGGAGCGTGGTTTCCTGGAACCTTATGATCGCCGGGTGT GCACGCTGCGGACGAGATGACATGGCGGTGTCCTGTTTCGAGAGGATGATCAGGGAAGGA GAGGTGGCGCCAGATGATGGCACCTTGGTGGCAGTGCTCCCTGCTTGTGGTAGGACAGGG AATGTTAGGGCTGGGAGGTGGGCACATGAGTATGCGAGGAAGAGTGGCTTGTTGGACGGT ACAGTGCATGTTGCAAATGCACTGATGGATATGTATTGCAAGAGCGGTGATGTTAATAGT GCACGGGAGGTGTTTATGACGACGCGGCCGCGTAGTGTGGTGAGCTGGAACACCTTGATC GCTGGATTCTCATTGAATGGTCGCGGAGTTGAGGGGATTGATCTGTTCCAGGAGATGAGG AGGCAAGGGATGGAGCCTAATGCTGTGACGTTCTTGGCAGTGCTTGGATGCTGTGCGCAT GCTGGGGCAGTGGATATTGGGCGGGAGATCTTCCGGAGCATGCTGTCGGAGCATGGGACT GAGGCAGCAATTGAGCACTACGGGTGTATGGTGGATTTATTTGGAAGATCTGGTCTCCTT GAAGAGGCACACGTATTGATTCAGGGGATGCCAATGAAGCCTAATGCTGCGATATGGGGA GCACTTTTAAGTGCGTGTCGGGCTCATGCTGGGCTTGGCCTTGCTGAGGTGGCTCTGAAA GAGCTTATCAATCTTGAACCATGGAACTCGGGGAACTATGTGCTGTTGGCCAATCTTTAT GTGGAAACAGAGCGGTGGGATGAGGCAGGGGAAGTGAGGAGATTGATGAGGAGGATGAGT GTGAATAAGGCTCCAGGGCAGAGCTTCATGGAAGAAGCTGAGTTTAGTTGA

Peptide Sequence

PEP ID	Zm00001d048670_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:3063257:3064807:1 gene:Zm00001d048670 transcript:Zm00001d048670_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MPLAAGDPSPPPSTAHAITTPDGWHPRTAERHLLHLLHHCPLARGRPLELLAFAVRRALP YSPPSPHHHALAALLLLSSPPPPALPILRLLPPEPTPPLPLLNAAVKALSASSPPDDAFR LLSTLRQFHAPDRLTFLPLIGCASSLPLLYALHSLLLRLGFLSHHVISLALLKPYPLPQA RVLFDDMPQKNKCTVAYNTLITACLRVRDIRAARHLFDEMQWHRRSRRSVVSWNLMIAGC ARCGRDDMAVSCFERMIREGEVAPDDGTLVAVLPACGRTGNVRAGRWAHEYARKSGLLDG TVHVANALMDMYCKSGDVNSAREVFMTTRPRSVVSWNTLIAGFSLNGRGVEGIDLFQEMR RQGMEPNAVTFLAVLGCCAHAGAVDIGREIFRSMLSEHGTEAAIEHYGCMVDLFGRSGLL EEAHVLIQGMPMKPNAAIWGALLSACRAHAGLGLAEVALKELINLEPWNSGNYVLLANLY VETERWDEAGEVRRLMRRMSVNKAPGQSFMEEAEFS

Transcript Sequence

Transcript ID	Zm00001d048670_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:3063257:3064807:1 gene:Zm00001d048670 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCGCTCGCCGCTGGCGATCCGTCGCCTCCGCCGTCCACCGCCCACGCCATAACCACC CCAGACGGGTGGCACCCGCGCACGGCGGAGCGCCATCTGCTTCACCTCCTCCATCACTGT CCCCTAGCTCGCGGTCGCCCGCTCGAGCTCCTCGCGTTCGCCGTCCGCCGCGCGCTCCCC TACTCCCCGCCGTCACCGCACCACCACGCCCTCGCGGCGCTGCTGCTCCTGTCCTCCCCT CCGCCACCCGCTCTGCCAATCCTCCGCCTCCTCCCTCCCGAACCCACACCCCCTCTCCCG CTCCTCAACGCCGCCGTCAAGGCCCTCTCCGCCTCCTCCCCGCCGGACGATGCCTTCCGT CTCCTCTCCACCCTCCGCCAATTCCACGCGCCTGACCGCCTAACCTTCCTGCCCCTCATC GGCTGCGCCTCCTCCTTGCCGCTCCTCTACGCGCTGCACTCGCTCCTCCTCCGCCTCGGC TTCCTATCTCACCACGTCATCTCCCTCGCCCTACTCAAGCCCTACCCGCTGCCGCAGGCC CGGGTCTTGTTCGACGATATGCCCCAAAAGAACAAGTGCACCGTCGCCTACAACACCCTC ATCACGGCGTGCCTCAGGGTCAGGGACATCCGTGCAGCGCGCCACCTGTTCGACGAAATG CAGTGGCACAGGCGGTCCAGGAGGAGCGTGGTTTCCTGGAACCTTATGATCGCCGGGTGT GCACGCTGCGGACGAGATGACATGGCGGTGTCCTGTTTCGAGAGGATGATCAGGGAAGGA GAGGTGGCGCCAGATGATGGCACCTTGGTGGCAGTGCTCCCTGCTTGTGGTAGGACAGGG AATGTTAGGGCTGGGAGGTGGGCACATGAGTATGCGAGGAAGAGTGGCTTGTTGGACGGT ACAGTGCATGTTGCAAATGCACTGATGGATATGTATTGCAAGAGCGGTGATGTTAATAGT GCACGGGAGGTGTTTATGACGACGCGGCCGCGTAGTGTGGTGAGCTGGAACACCTTGATC GCTGGATTCTCATTGAATGGTCGCGGAGTTGAGGGGATTGATCTGTTCCAGGAGATGAGG AGGCAAGGGATGGAGCCTAATGCTGTGACGTTCTTGGCAGTGCTTGGATGCTGTGCGCAT GCTGGGGCAGTGGATATTGGGCGGGAGATCTTCCGGAGCATGCTGTCGGAGCATGGGACT GAGGCAGCAATTGAGCACTACGGGTGTATGGTGGATTTATTTGGAAGATCTGGTCTCCTT GAAGAGGCACACGTATTGATTCAGGGGATGCCAATGAAGCCTAATGCTGCGATATGGGGA GCACTTTTAAGTGCGTGTCGGGCTCATGCTGGGCTTGGCCTTGCTGAGGTGGCTCTGAAA GAGCTTATCAATCTTGAACCATGGAACTCGGGGAACTATGTGCTGTTGGCCAATCTTTAT GTGGAAACAGAGCGGTGGGATGAGGCAGGGGAAGTGAGGAGATTGATGAGGAGGATGAGT GTGAATAAGGCTCCAGGGCAGAGCTTCATGGAAGAAGCTGAGTTTAGTTGA