Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048643_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:4:2537170:2541708:1 gene:Zm00001d048643 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclopropane-fatty-acyl-phospholipid synthase
Sequence	ATGCCGCGTAATTCCTCTGCATGGAGCGCTAGGAACTTCTTGGGGACAACAAGCAGTGGT GTCTGTGTTACCTCCTGGCTAAATATACTTGAGAACATTGAATCTGCCGGGCCTCTACTT GTGACACTTAACCCTCCTCGTGTTCCCAATCATGTATTGCTTAAATGTCATATTAGCCAT CCAATTCCTTCCATTGCTGCTGCAAAGGCTAATCTTCAGCTCAACAGCATTCAAGGAAAG AGGGGCATCTGGTTCTGTGGCTCATATCAAGGCTATGGATACCATGAGGACAGTGTTAAG GCTGGGAAAGCAGCAGCTTTAGGATTGCTTGGAAGGAAATGTGACCTTTTGTCTAACCCA AAACCGATGGTCTCATCGTGGACAGAGGCGGGCGCACGTCTTCTTGTAGCAAGAAGCCTA GACCAATACATAACCATTGGTAACTTCTGTATACTCGAAGAAGGAGGCACTACATTCAGT TTTGGTAAAGCATGCGAAAAATGTCATGTAAAATCTGCGATACGCGTTCACGATCCCCAG TTCTATTGGAAGGCTGCAACAGAAGGAGACCTTGGCTTTGCATCTGCCTACATCAATGGC CAAATCTCATTTGTTGATCACCGAAAAGGCCTTGTGAACCTTGTACGGATCATACTGGCT AATAGAGGTGAGTTCAAGAGGTTGAGCAGCACTGCTAGTGGCAATACAAGGAAAGCCTGG TGGTCGCCGTTGCTTGGAATTACTGGAGTCTCATTTGCAAAATACTTTTTGCGTCATGCC TTGCGGAAGAATAGTGTATCCAAAGCTCGTAAAAATATATCTGAACACTACGATCTGAGT AATGATTTCTTCGCTCTTTATCTGGATCCATCAATGACGTACTCTTCTGGCATTTTTAAG GTGGCGGAGGAGAGCTTAGAAACAGCCCAACTACGCAAACTTGACAGTCTCATTAACAAG GCTAAGGTGGAGCCAGGGCACCATGTTCTTGACATTGGTTGTGGTTGGGGCACTTTAGCA ATACGGTTGGTGAAGCAAACCGGTTGCAAGTACACAGGAATCACATTATCTGAGGAGCAA CTGAAATACGCGAAGAGAAAGGTGAAAGAATCTGGGTTAGAGGACCGCATAACTTTGCTC CTTTGCGATTACCGTCAACTACCGGCAGGCGATAAGTTTGACAGGATTATAAGCTGTGAA ATGATTGAACATGTTGGGCATGAGTACATGGATGATTTCTTCGGGTGCTGCGAGTATCAT TTGGCAGAGCATGGCCTACTTGTCCTCCAGTCCATCGCGCTCCCAGAAGAATTGTATGAC AAAATGAGGATGCGGCCCGAGTTTCTCAAGACATATATCTTCCCCGGTGGCTGCCTACCT TCTCTAGGCCGGATTGTGTCTGCCATGTCTAATGCATCAAGGCTCAACATTCAGCACCTT GAGAATATTGGGGACCACTACTACACTACCCTAATGAACTGGAGGGACAACTTCGTGGCC AACAGAGAAAAAGCTTCTGCGCTTGGATTTGACGACAAATTCATCCGTACCTGGGAGTAT TATTTAAGTTACGCTGCGGCTTTGTTCAAATCACGCACAGCTATAGATTACCAGATAGTG TTTGCTCGGCCAGGCGATTCAAAGCTACCAAGCTATGTTGCCATTGCATAA

Peptide Sequence

PEP ID	Zm00001d048643_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:4:2537170:2541708:1 gene:Zm00001d048643 transcript:Zm00001d048643_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclopropane-fatty-acyl-phospholipid synthase
Sequence	MPRNSSAWSARNFLGTTSSGVCVTSWLNILENIESAGPLLVTLNPPRVPNHVLLKCHISH PIPSIAAAKANLQLNSIQGKRGIWFCGSYQGYGYHEDSVKAGKAAALGLLGRKCDLLSNP KPMVSSWTEAGARLLVARSLDQYITIGNFCILEEGGTTFSFGKACEKCHVKSAIRVHDPQ FYWKAATEGDLGFASAYINGQISFVDHRKGLVNLVRIILANRGEFKRLSSTASGNTRKAW WSPLLGITGVSFAKYFLRHALRKNSVSKARKNISEHYDLSNDFFALYLDPSMTYSSGIFK VAEESLETAQLRKLDSLINKAKVEPGHHVLDIGCGWGTLAIRLVKQTGCKYTGITLSEEQ LKYAKRKVKESGLEDRITLLLCDYRQLPAGDKFDRIISCEMIEHVGHEYMDDFFGCCEYH LAEHGLLVLQSIALPEELYDKMRMRPEFLKTYIFPGGCLPSLGRIVSAMSNASRLNIQHL ENIGDHYYTTLMNWRDNFVANREKASALGFDDKFIRTWEYYLSYAAALFKSRTAIDYQIV FARPGDSKLPSYVAIA

Transcript Sequence

Transcript ID	Zm00001d048643_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:2537170:2541708:1 gene:Zm00001d048643 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclopropane-fatty-acyl-phospholipid synthase
Sequence	ATCCACAAATTTTAAGACAACAACTTTATTAGGCTGATGAAAGAAATTTTGAACTATCTG GATACCAAATTTTAGAGGTTGATGGTTCGGTGGAGACGTACGATAGGATCATAATAGGTA TTAATGCACATGATGCACTAAAAGTATTAGGAGCTGAAGCAACAAATGAGGAACTGAAGA ATCTAGGAGCTTTCCATTTTATCCGGAGTATCGCGTACCTCCACTCTGATGAAAGTCTGA TGCCGCGTAATTCCTCTGCATGGAGCGCTAGGAACTTCTTGGGGACAACAAGCAGTGGTG TCTGTGTTACCTCCTGGCTAAATATACTTGAGAACATTGAATCTGCCGGGCCTCTACTTG TGACACTTAACCCTCCTCGTGTTCCCAATCATGTATTGCTTAAATGTCATATTAGCCATC CAATTCCTTCCATTGCTGCTGCAAAGGCTAATCTTCAGCTCAACAGCATTCAAGGAAAGA GGGGCATCTGGTTCTGTGGCTCATATCAAGGCTATGGATACCATGAGGACAGTGTTAAGG CTGGGAAAGCAGCAGCTTTAGGATTGCTTGGAAGGAAATGTGACCTTTTGTCTAACCCAA AACCGATGGTCTCATCGTGGACAGAGGCGGGCGCACGTCTTCTTGTAGCAAGAAGCCTAG ACCAATACATAACCATTGGTAACTTCTGTATACTCGAAGAAGGAGGCACTACATTCAGTT TTGGTAAAGCATGCGAAAAATGTCATGTAAAATCTGCGATACGCGTTCACGATCCCCAGT TCTATTGGAAGGCTGCAACAGAAGGAGACCTTGGCTTTGCATCTGCCTACATCAATGGCC AAATCTCATTTGTTGATCACCGAAAAGGCCTTGTGAACCTTGTACGGATCATACTGGCTA ATAGAGGTGAGTTCAAGAGGTTGAGCAGCACTGCTAGTGGCAATACAAGGAAAGCCTGGT GGTCGCCGTTGCTTGGAATTACTGGAGTCTCATTTGCAAAATACTTTTTGCGTCATGCCT TGCGGAAGAATAGTGTATCCAAAGCTCGTAAAAATATATCTGAACACTACGATCTGAGTA ATGATTTCTTCGCTCTTTATCTGGATCCATCAATGACGTACTCTTCTGGCATTTTTAAGG TGGCGGAGGAGAGCTTAGAAACAGCCCAACTACGCAAACTTGACAGTCTCATTAACAAGG CTAAGGTGGAGCCAGGGCACCATGTTCTTGACATTGGTTGTGGTTGGGGCACTTTAGCAA TACGGTTGGTGAAGCAAACCGGTTGCAAGTACACAGGAATCACATTATCTGAGGAGCAAC TGAAATACGCGAAGAGAAAGGTGAAAGAATCTGGGTTAGAGGACCGCATAACTTTGCTCC TTTGCGATTACCGTCAACTACCGGCAGGCGATAAGTTTGACAGGATTATAAGCTGTGAAA TGATTGAACATGTTGGGCATGAGTACATGGATGATTTCTTCGGGTGCTGCGAGTATCATT TGGCAGAGCATGGCCTACTTGTCCTCCAGTCCATCGCGCTCCCAGAAGAATTGTATGACA AAATGAGGATGCGGCCCGAGTTTCTCAAGACATATATCTTCCCCGGTGGCTGCCTACCTT CTCTAGGCCGGATTGTGTCTGCCATGTCTAATGCATCAAGGCTCAACATTCAGCACCTTG AGAATATTGGGGACCACTACTACACTACCCTAATGAACTGGAGGGACAACTTCGTGGCCA ACAGAGAAAAAGCTTCTGCGCTTGGATTTGACGACAAATTCATCCGTACCTGGGAGTATT ATTTAAGTTACGCTGCGGCTTTGTTCAAATCACGCACAGCTATAGATTACCAGATAGTGT TTGCTCGGCCAGGCGATTCAAAGCTACCAAGCTATGTTGCCATTGCATAAAATAAATGGA TAGGATCGAGATGATGCTGTGTTATGCGTGTGTGTGTGTGAGAGAGAGAAATTTATTCAG TCATGTACGTGCATGTGTGTTGGAGAGCAGCAGCAGGCCAGCTGCTGCATGCTGTGTGGC TTGGATAGATGCATGCGTGTGGTATATAGTACTACTAGAAGTCTGCATGCATATGTCTGC TAGCGGTGCTTTCATTTGCACTCGAGTCGCTCCACGTAAGAGGTGAAATAATAGTGGTTA AG