Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048627_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:4:1738356:1741620:-1 gene:Zm00001d048627 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-citrate synthase alpha chain protein 3
Sequence

ATGAATCCGTTCACCATGGTCAATGGGGAGCCATATCCTCTGGACATGAGAGGAGAACTA
GATGACACAGCAGCTTTCAAGAACTTCAAGAAGTGGGGAGGTATAGAATTTCCTCTACCT
TTTGGAAGAGTACTCAGCCCTACAGAAAGTTTCATCCATGAACTAGATGAGAAGACAAGT
GCCTCTCTGAAGTTCACGGTTTTGAACCCGAAAGGTCGCATCTGGACCATGGTCGCTGGT
GGTGGTGCTAGTGTCATTTATGCTGATACAGTTGGAGACTTGGGATATGCATCAGAGCTT
GGAAACTATGCAGAGTATAGTGGTGCTCCTAATGAGGAGGAGGTTCTGAATTATTCTAGA
GTTGTTCTTGATTGTGCAACTGCTGATCCTGATGGCCGCAAGAGAGCCCTTCTCATTGGA
GGTGGCATAGCTAACTTCACTGATGTTGCTACCACATTCAATGGCATCATCCGAGCCTTA
AGGGAGAAGGAATCCAAGTTGAAGGCTTCAAGAATGCACATTTATGTCCGCCGAGGTGGT
CCAAATTACCAATCTGGACTGGCTAAAATGCGTAAGCTTGGTGCAGAACTCGGCGTTCCA
ATTGAGGTGTATGGGCCAGAAGCGACTATGACTGGAATCTGCAAACAAGCAATTGAATGC
ATCATGGCTGCAGCGTAA

Peptide Sequence

PEP ID

Zm00001d048627_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:4:1738356:1741620:-1 gene:Zm00001d048627 transcript:Zm00001d048627_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-citrate synthase alpha chain protein 3
Sequence

MNPFTMVNGEPYPLDMRGELDDTAAFKNFKKWGGIEFPLPFGRVLSPTESFIHELDEKTS
ASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLNYSR
VVLDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKASRMHIYVRRGG
PNYQSGLAKMRKLGAELGVPIEVYGPEATMTGICKQAIECIMAAA

Transcript Sequence

Transcript ID

Zm00001d048627_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:1738356:1741620:-1 gene:Zm00001d048627 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-citrate synthase alpha chain protein 3
Sequence

CTCTCTCTACATAAACAAAAACCAGTCCTTTGTTCTTCTTCCCCCGGCACGCCCAGCGCC
AGTCACCAACCTTCCACTCCCTCCCTCCGTCGCCATGACTTGGATTTCTCATTTCTTGAG
ATGAATCCGTTCACCATGGTCAATGGGGAGCCATATCCTCTGGACATGAGAGGAGAACTA
GATGACACAGCAGCTTTCAAGAACTTCAAGAAGTGGGGAGGTATAGAATTTCCTCTACCT
TTTGGAAGAGTACTCAGCCCTACAGAAAGTTTCATCCATGAACTAGATGAGAAGACAAGT
GCCTCTCTGAAGTTCACGGTTTTGAACCCGAAAGGTCGCATCTGGACCATGGTCGCTGGT
GGTGGTGCTAGTGTCATTTATGCTGATACAGTTGGAGACTTGGGATATGCATCAGAGCTT
GGAAACTATGCAGAGTATAGTGGTGCTCCTAATGAGGAGGAGGTTCTGAATTATTCTAGA
GTTGTTCTTGATTGTGCAACTGCTGATCCTGATGGCCGCAAGAGAGCCCTTCTCATTGGA
GGTGGCATAGCTAACTTCACTGATGTTGCTACCACATTCAATGGCATCATCCGAGCCTTA
AGGGAGAAGGAATCCAAGTTGAAGGCTTCAAGAATGCACATTTATGTCCGCCGAGGTGGT
CCAAATTACCAATCTGGACTGGCTAAAATGCGTAAGCTTGGTGCAGAACTCGGCGTTCCA
ATTGAGGTGTATGGGCCAGAAGCGACTATGACTGGAATCTGCAAACAAGCAATTGAATGC
ATCATGGCTGCAGCGTAATCAGAGCGTAGCTCTGGGTAGTTTGGGATCTGCAAACACGCA
ATTGAATGTGTCATGGACTCAGCATAAATGAGAGATGGATAGTAGTTGCATTATATAGTT
CACACATGGTGTTTCTGTTTTTTGTTTCAGATATGTTGTAGCGTGTTGTTTGAACGAAAC
CTTCACAGATCATTACTGCAAAGAAATTGCTGTGTG