Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048620_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:1475647:1478778:-1 gene:Zm00001d048620 gene_biotype:protein_coding transcript_biotype:protein_coding description:PIF / Ping-Pong family of plant transposases
Sequence	ATGCCGCCGCTGCGCGGAGCCAAGCGCCGCCGGAAGGCGGCGTTGGAGAAGAAGGCGGCA GCGGTCGCAATGGCGTCTGCCGCCGCGGGCGACCCTCCTGGCGACTGGTGGGAAGCCTTC TGCATCCGTATGTCAGGAACCTTATCTTCTATCGAGGATGCACAAAGATTTGAGTCTATA TTCAAAATGCCAAGAAGAGCCTTCGACTATGTCTGCAATTTGGTGAGAGATGAAATGATG GTGAGGTCCTGCAGCTATACCTTCCTTGATGGCACAGTGCTGTGTTTGGAAGACCGAGTG GCCATTGCTCTGCGAAGGCTGAACTCTGGTGGGTCACTGGTGACCGTAGGATCCTCTGTT GGAGTGAACCACTCAACCGTGTCGCTGATAACCTGGAGGTTCATCGAGGCTATGGAGGAG CGAGCGAGCCACCACCTGCGCTGGCCAGACTCTATTGAAATGGAGAAGATCAAGTCCAAG TTCGAGAAGATCCATGGTCTGCCAAACTGCTGCGGCGTTGTGGATACAACACACATCACA ATGTGCCTTTCATCAGCCGAGCCGAACTGCAAGGTCTGGCTTGATCAGGAGAAGAACTAC AGCATGGTGTTGCAAGCCGTTGTTGATCTGGACACCAAGTTCACAGACATCGTGACTGGC TGGCCTGGTAGCATGAAAGAGTCGAGCATTTTGCACAGCTCTGGCCTTTTCAAGCTCTGC GAGAAAGGCGAGCGGCTGAATGGCAGCAAGCTGAAGGTATCAGATGGGTCAGAGATCGGG GAATACTTGATCGGCGACTCCGGCTACCCCCTTCTCCCCTGGCTGCTCACACCTTACCAA GAGAAGGACCTCACAGAGTCCAGTGCTGAGTTCAACATTAGGCACTCTTCTGCGAGAACA GTCGCTCCGAGAACACTGGCCAAGTTCAAGGACACATGGAAGTTCCTGCAAGGGGAGATG TGGCGTCCGGACAAGCACAAGCTGCCCCGGATAATCCATGTCTGCTGCTTGCTGCACAAC ATAATCATAGACCTTCAGGAAACAGCAGTGGACGAGGCACAGGCGTGGCCGAGCGATCAT GACGCTAAGTACAGGCAGCAAGTGTGCCAGCTAGCTGATGAGAATGGAGTCAGGGTGAGG GACAAACTGTCCCAGCACCTGATTAGCAAGTGA

Peptide Sequence

PEP ID	Zm00001d048620_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:1475647:1478778:-1 gene:Zm00001d048620 transcript:Zm00001d048620_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:PIF / Ping-Pong family of plant transposases
Sequence	MPPLRGAKRRRKAALEKKAAAVAMASAAAGDPPGDWWEAFCIRMSGTLSSIEDAQRFESI FKMPRRAFDYVCNLVRDEMMVRSCSYTFLDGTVLCLEDRVAIALRRLNSGGSLVTVGSSV GVNHSTVSLITWRFIEAMEERASHHLRWPDSIEMEKIKSKFEKIHGLPNCCGVVDTTHIT MCLSSAEPNCKVWLDQEKNYSMVLQAVVDLDTKFTDIVTGWPGSMKESSILHSSGLFKLC EKGERLNGSKLKVSDGSEIGEYLIGDSGYPLLPWLLTPYQEKDLTESSAEFNIRHSSART VAPRTLAKFKDTWKFLQGEMWRPDKHKLPRIIHVCCLLHNIIIDLQETAVDEAQAWPSDH DAKYRQQVCQLADENGVRVRDKLSQHLISK

Transcript Sequence

Transcript ID	Zm00001d048620_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:1475647:1478778:-1 gene:Zm00001d048620 gene_biotype:protein_coding transcript_biotype:protein_coding description:PIF / Ping-Pong family of plant transposases
Sequence	GTAGTAGGAAGAACAACCCCCAAACACACACCCGAAGAAAGAGGCTCGCTCCTCCCTTCG CTCTCTCCACCTTGCGGCGCTCCACCTCCGTCCCCTCGCCGCCGCTTCTCACTTCGCCTC CCCTCTCAAACACCCCAAGCCGCAGCGCAGGCACGCGCGCCGACGTCTATCCACCCAGCG GCACTCCTCATGCCCTGCATCCTCCACCGCCTGCAGACGAGTCCCCCACGCCACCGCGGC CACGCCTCGCCGTCCATGTCCATGGCCGCCGCCCCGGCTTCCTGATTCGTCCCGTACCCG CGCGTCGCTCCTCCCGATTCCATCCCCGTCCGCGCCATGCCGCCGCTGCGCGGAGCCAAG CGCCGCCGGAAGGCGGCGTTGGAGAAGAAGGCGGCAGCGGTCGCAATGGCGTCTGCCGCC GCGGGCGACCCTCCTGGCGACTGGTGGGAAGCCTTCTGCATCCGTATGTCAGGAACCTTA TCTTCTATCGAGGATGCACAAAGATTTGAGTCTATATTCAAAATGCCAAGAAGAGCCTTC GACTATGTCTGCAATTTGGTGAGAGATGAAATGATGGTGAGGTCCTGCAGCTATACCTTC CTTGATGGCACAGTGCTGTGTTTGGAAGACCGAGTGGCCATTGCTCTGCGAAGGCTGAAC TCTGGTGGGTCACTGGTGACCGTAGGATCCTCTGTTGGAGTGAACCACTCAACCGTGTCG CTGATAACCTGGAGGTTCATCGAGGCTATGGAGGAGCGAGCGAGCCACCACCTGCGCTGG CCAGACTCTATTGAAATGGAGAAGATCAAGTCCAAGTTCGAGAAGATCCATGGTCTGCCA AACTGCTGCGGCGTTGTGGATACAACACACATCACAATGTGCCTTTCATCAGCCGAGCCG AACTGCAAGGTCTGGCTTGATCAGGAGAAGAACTACAGCATGGTGTTGCAAGCCGTTGTT GATCTGGACACCAAGTTCACAGACATCGTGACTGGCTGGCCTGGTAGCATGAAAGAGTCG AGCATTTTGCACAGCTCTGGCCTTTTCAAGCTCTGCGAGAAAGGCGAGCGGCTGAATGGC AGCAAGCTGAAGGTATCAGATGGGTCAGAGATCGGGGAATACTTGATCGGCGACTCCGGC TACCCCCTTCTCCCCTGGCTGCTCACACCTTACCAAGAGAAGGACCTCACAGAGTCCAGT GCTGAGTTCAACATTAGGCACTCTTCTGCGAGAACAGTCGCTCCGAGAACACTGGCCAAG TTCAAGGACACATGGAAGTTCCTGCAAGGGGAGATGTGGCGTCCGGACAAGCACAAGCTG CCCCGGATAATCCATGTCTGCTGCTTGCTGCACAACATAATCATAGACCTTCAGGAAACA GCAGTGGACGAGGCACAGGCGTGGCCGAGCGATCATGACGCTAAGTACAGGCAGCAAGTG TGCCAGCTAGCTGATGAGAATGGAGTCAGGGTGAGGGACAAACTGTCCCAGCACCTGATT AGCAAGTGACCACCACCAAGCGTAAAGCTTATTGGACGAGAGAGTAGTGCCATTTTCATC TGTTTCAGGCAGCTCTAAATCCCTTTTGATGTCCAGTTTTGCAGAGTTGTAAATGAGGCA GGTGAGGGCATCGGTTCAAACTCACTGTAACCCTCTTAAAATTAAAATTAAGGCTGTTGC AAACTTGTCAAAAATCAATGTGGCATTGTGGCTCCTTTGGTTTATAATGTTTGTGCTTTG GTGGGCTTG