Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048606_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:1119072:1120989:1 gene:Zm00001d048606 gene_biotype:protein_coding transcript_biotype:protein_coding description:RHOMBOID-like protein 1
Sequence	ATGCATCCACCACCGCATCCATCCATGAAGCCCGGCGGCGAGGAGGAGGAGGATGTGCAG GTGCTGGTGGTGCGGTCCCACCACCACTCGGACCAGAGCAGCACGAGGAGCCACCACCAC CAGCAGGTCGTCATCAGGGCGCGGCCCTACTACCGGCGGTGGTCGCCGTGGCTCGTCTCC GGCGCCACCGTGGCCTGCGTCGCCATCTTCCTCGTCACCATGTACGTGAACGACTGCCCG ACGCACAACTCCAACTGCGCCGCCGCAGGGTTCCTCGGCCGCTTCGCCTTCCAGCCGCTC CGCGAGAACCCGCTCCTCGGACCCTCCTCCGCCACGTTAGTGAAGATGGGGGCTCTCGAT GTGGCTAAGGTCGTCCATGGCCGGCAAGGATGGCGTCTGATCACCTGCATGTGGCTCCAC GCCGGAGTTGTTCACCTGCTCATCAACATGCTGTGCCTCCTAGTCGTGGGCATACGCCTG GAGCAAGAATTTGGGTTCGTGAGGATCGGTCTGGTGTACCTCATCTCTGGTTTTGGCGGG AGCCTCATGTCTGCTCTCTTCATACAGTCCAGCAGCGTCTCCGTGGGGGCCTCCGGCGCT CTCTTCGGCCTCATCGGATCCATGCTCTCTGAGCTCATCACCAACTGGTCACTCTACGCA AACAAGGTGGCGGCGCTGCTAACTCTGCTTCTGGTGATCCTCTCCAACCTGGCGCTGGGC CTCCTCCCCCGGGTGGACAACTTCGCCCACATCGGCGGCCTCGTCTCCGGCTTCCTCCTC GGCTTCGTCGTCTTCGTCCGCCCGCACTTGGACTGGCTCACCCAGCAGCAGAGAAGCGGC GGCGGCGGGCAAGGGCAACAGCAAGCTCCTCCGCCGGTGGCAGCGGCGAGGAAACGCAAG CACAGGACGTACCAGTATGTGCTGTGGCTGGCCGCCGCCGCGCTGCTCGTGGCCGGGCTC ACGGCGGCCACCGTGCTGCTTTTCCGCGGGTACGACGCCAACCAGCACTGCCCGTGGTGC CACTACCTCAGCTGCGTGCCCACCAGGAGGTGGAGGTGCGACGGGTCGCCGACCACGTGC ACGGCCACGACGCAGGAGAACAACACGCTCAGCGTCGTCTGCGAGGGCGGCAGCAACCGC ACGTACGTCGTGGCGGCGGCGTCGCAGGACAGGATCAAGGACCTCTGCAATCAGCTCTGC ACCTAG

Peptide Sequence

PEP ID	Zm00001d048606_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:1119072:1120989:1 gene:Zm00001d048606 transcript:Zm00001d048606_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RHOMBOID-like protein 1
Sequence	MHPPPHPSMKPGGEEEEDVQVLVVRSHHHSDQSSTRSHHHQQVVIRARPYYRRWSPWLVS GATVACVAIFLVTMYVNDCPTHNSNCAAAGFLGRFAFQPLRENPLLGPSSATLVKMGALD VAKVVHGRQGWRLITCMWLHAGVVHLLINMLCLLVVGIRLEQEFGFVRIGLVYLISGFGG SLMSALFIQSSSVSVGASGALFGLIGSMLSELITNWSLYANKVAALLTLLLVILSNLALG LLPRVDNFAHIGGLVSGFLLGFVVFVRPHLDWLTQQQRSGGGGQGQQQAPPPVAAARKRK HRTYQYVLWLAAAALLVAGLTAATVLLFRGYDANQHCPWCHYLSCVPTRRWRCDGSPTTC TATTQENNTLSVVCEGGSNRTYVVAAASQDRIKDLCNQLCT

Transcript Sequence

Transcript ID	Zm00001d048606_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:1119072:1120989:1 gene:Zm00001d048606 gene_biotype:protein_coding transcript_biotype:protein_coding description:RHOMBOID-like protein 1
Sequence	GGAATCAGCGGTAAACATACTCCTCCTTGTCAGCAAAGCTCCTTCTCCTCCTCCTCCTCC TCCTCCTCCTCCTCCTCCTCCTTCCTGCCGTCGCCGACGACTGCCCCACCTGTACTCTCC CCTGCGTCCTCCTCCTCGGCTCTGCTACACGCCTTCCTTGCTTCCTCCCTCCAGGCAGGC CAGCTCCTTCCTCCTCACGCTAGCTCGGTGTCTTCCTTTTCCCTTTTCCAGCGCGCGCCG GCCGGCCGGCCGGCCAAATTCCAATCCCATCCACCATCTTGTTCTTGTCTTCTCCGACAA TTAACCATCAATCCCAAAACGTCATATTCATCTTGTCGAGGCCATAAAGTCACAACAAAC ACGTCGTCCATGCATCCACCACCGCATCCATCCATGAAGCCCGGCGGCGAGGAGGAGGAG GATGTGCAGGTGCTGGTGGTGCGGTCCCACCACCACTCGGACCAGAGCAGCACGAGGAGC CACCACCACCAGCAGGTCGTCATCAGGGCGCGGCCCTACTACCGGCGGTGGTCGCCGTGG CTCGTCTCCGGCGCCACCGTGGCCTGCGTCGCCATCTTCCTCGTCACCATGTACGTGAAC GACTGCCCGACGCACAACTCCAACTGCGCCGCCGCAGGGTTCCTCGGCCGCTTCGCCTTC CAGCCGCTCCGCGAGAACCCGCTCCTCGGACCCTCCTCCGCCACGTTAGTGAAGATGGGG GCTCTCGATGTGGCTAAGGTCGTCCATGGCCGGCAAGGATGGCGTCTGATCACCTGCATG TGGCTCCACGCCGGAGTTGTTCACCTGCTCATCAACATGCTGTGCCTCCTAGTCGTGGGC ATACGCCTGGAGCAAGAATTTGGGTTCGTGAGGATCGGTCTGGTGTACCTCATCTCTGGT TTTGGCGGGAGCCTCATGTCTGCTCTCTTCATACAGTCCAGCAGCGTCTCCGTGGGGGCC TCCGGCGCTCTCTTCGGCCTCATCGGATCCATGCTCTCTGAGCTCATCACCAACTGGTCA CTCTACGCAAACAAGGTGGCGGCGCTGCTAACTCTGCTTCTGGTGATCCTCTCCAACCTG GCGCTGGGCCTCCTCCCCCGGGTGGACAACTTCGCCCACATCGGCGGCCTCGTCTCCGGC TTCCTCCTCGGCTTCGTCGTCTTCGTCCGCCCGCACTTGGACTGGCTCACCCAGCAGCAG AGAAGCGGCGGCGGCGGGCAAGGGCAACAGCAAGCTCCTCCGCCGGTGGCAGCGGCGAGG AAACGCAAGCACAGGACGTACCAGTATGTGCTGTGGCTGGCCGCCGCCGCGCTGCTCGTG GCCGGGCTCACGGCGGCCACCGTGCTGCTTTTCCGCGGGTACGACGCCAACCAGCACTGC CCGTGGTGCCACTACCTCAGCTGCGTGCCCACCAGGAGGTGGAGGTGCGACGGGTCGCCG ACCACGTGCACGGCCACGACGCAGGAGAACAACACGCTCAGCGTCGTCTGCGAGGGCGGC AGCAACCGCACGTACGTCGTGGCGGCGGCGTCGCAGGACAGGATCAAGGACCTCTGCAAT CAGCTCTGCACCTAGCACTGCATATTCTTCGTGTACATCGATCCATTTTTACTCACCGTC AGAGTGAGGTCCTAGCTTTACAGCAAGAGAAAGAATTTGTTCGATTTACAGGCAAATATG ATATTTTTGAAATGCAGCAAACAACCAAAGATTTACCATTTATTTACAGGC