Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048595_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:983434:984507:1 gene:Zm00001d048595 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative thaumatin domain family protein

Sequence

ATGGCCTTGGCCTCTAATAAGCTCCTCATCAAGTACAGCTTCGTCACGGTGGCATTCTTA
GTCGCCAGCACTCGTGGGAGTGGCACCATCCAGCTGATCTTGGTGAACAACTGCGCGGAA
TCCATCTGGCCCGGGCTTCTGGGCACCGCCGGCCAGCCGACGCCGCAGTCGGGCGGCCTC
CACCTGGCCCCCGGCGACGAGGCGGCCTTCGACGTGCCGGTGGGGTGGTCCGGCCGCGTG
TGGCCGCGGCGCGGCTGCTCCTTCGACCAGCGCGAGCGGGGGCAGTGCGCGACGGGGGAC
TGCGGCGGCGTGCTCCGCTGCGACGGGCGGCCCGGCGCCGCCCCGGCCACGGTGGTGGAG
ATGACGCTGGGCACCCCCAAGTCCCCGCTCCACTTCTACGACGTGTCGCTGGTGGACGGC
TTCAACGCGCCGGTGTCCATGGCCCCCGTGGGCGGCGGCGCCGGGTGCGGCGTGGCCGGG
TGCCAGGCGGACCTGAACGTCTGCTGCCCGTCGGCGCTGGAGGTGAGGGACCGCGAGGGG
AGGGTGGCCGGCTGCCGGAGCGCCTGCAAGGCCATGGGAGGGGACAGGTACTGCTGCACG
GGGGACTACGCGTCGCCGGACAGGTGCCGCCCCACCATCTTCGCCCACGTCTTCAAGGCC
GTGTGCCCCAAGGCCTACAGCTACGCGTACGACGACGCCACCTCGCTGAACCGGTGCAAG
GCCAGCCGGTACCTCATCACCTTCTGCCCACCGCCGACATCCAGGAAATGA

Peptide Sequence

PEP ID

Zm00001d048595_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:983434:984507:1 gene:Zm00001d048595 transcript:Zm00001d048595_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative thaumatin domain family protein

Sequence

MALASNKLLIKYSFVTVAFLVASTRGSGTIQLILVNNCAESIWPGLLGTAGQPTPQSGGL
HLAPGDEAAFDVPVGWSGRVWPRRGCSFDQRERGQCATGDCGGVLRCDGRPGAAPATVVE
MTLGTPKSPLHFYDVSLVDGFNAPVSMAPVGGGAGCGVAGCQADLNVCCPSALEVRDREG
RVAGCRSACKAMGGDRYCCTGDYASPDRCRPTIFAHVFKAVCPKAYSYAYDDATSLNRCK
ASRYLITFCPPPTSRK

Transcript Sequence

Transcript ID

Zm00001d048595_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:983434:984507:1 gene:Zm00001d048595 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative thaumatin domain family protein

Sequence

CAGCAGCAGCAAGCTTGAGCCACTGCTGCACGTATATTATTAAGATCGAAAGCCACCACC
ATGGCCTTGGCCTCTAATAAGCTCCTCATCAAGTACAGCTTCGTCACGGTGGCATTCTTA
GTCGCCAGCACTCGTGGGAGTGGCACCATCCAGCTGATCTTGGTGAACAACTGCGCGGAA
TCCATCTGGCCCGGGCTTCTGGGCACCGCCGGCCAGCCGACGCCGCAGTCGGGCGGCCTC
CACCTGGCCCCCGGCGACGAGGCGGCCTTCGACGTGCCGGTGGGGTGGTCCGGCCGCGTG
TGGCCGCGGCGCGGCTGCTCCTTCGACCAGCGCGAGCGGGGGCAGTGCGCGACGGGGGAC
TGCGGCGGCGTGCTCCGCTGCGACGGGCGGCCCGGCGCCGCCCCGGCCACGGTGGTGGAG
ATGACGCTGGGCACCCCCAAGTCCCCGCTCCACTTCTACGACGTGTCGCTGGTGGACGGC
TTCAACGCGCCGGTGTCCATGGCCCCCGTGGGCGGCGGCGCCGGGTGCGGCGTGGCCGGG
TGCCAGGCGGACCTGAACGTCTGCTGCCCGTCGGCGCTGGAGGTGAGGGACCGCGAGGGG
AGGGTGGCCGGCTGCCGGAGCGCCTGCAAGGCCATGGGAGGGGACAGGTACTGCTGCACG
GGGGACTACGCGTCGCCGGACAGGTGCCGCCCCACCATCTTCGCCCACGTCTTCAAGGCC
GTGTGCCCCAAGGCCTACAGCTACGCGTACGACGACGCCACCTCGCTGAACCGGTGCAAG
GCCAGCCGGTACCTCATCACCTTCTGCCCACCGCCGACATCCAGGAAATGACGACCACAT
CCATGGATTGCATCTTCAAAATAATAATACTTACTAAATGTCCCTACGGTTTTTATATAT
CAGTCATGTAGAGCTTGTTTAATTAGGATACTTATTTAAACATATTCCAATCGGAGAGGT
CTCTATCCAACGATCAATTGTTCATAAAAAATAA