Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048556_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:9:158637586:158648645:1 gene:Zm00001d048556 gene_biotype:protein_coding transcript_biotype:protein_coding description:peptidyl-prolyl cis-trans isomerases
Sequence

ATGCCAGCGCTTCCCGCTTTTCCCCTCACCCGCCGCCCATCCGATGCCAGACGCCGCGGT
CGCCTCGTCCTTTCCCTCGTCGTCTTCGTTGCTGTCTCCGCCGCCGCAGCCCTCGCCTAC
CTATCTTTCCCCTCTGCCGGGCGGACATCGCCCCCGGCGGTCCGGACGGAGGCCGACTGC
TGCAGGGGTATGGAGGGCCTCGAGCTCTGGGGCCCGGCGGTCAAGTGGGGCTCAGACCAC
CGCCTGCCCTCCGCCGCCGCCTGCTGCGCCGCCTGCAAGGCCATGTGCCCTCACCCTAAG
GACGGGGCCTGCCGCTGCGACTCGTGGGTCTTCTGCGGTGACGAGCGCAAATGCAAGGAC
AGGCTCGGGGAGTGCTGGCTGAAGAAACAGAAGGATGTCATGGCCCCTGCTGTTATTGCA
AAGGGGGAGGACGTCATGTGGACTTCTGGTCTAATCTTTGGAAAAGGAGAGGGGATTGTG
GGGCTTGAAACAAATTTAGGGACACTTCATATTCAATTGCTGCCTGGTTGCGCGCCCCGT
TCAGTGGACCACTTCATCGAGCTCCTGGGCTTGCGCAACTGTGCTGGATGCAGATTTTAT
CGTGCAGAAGGACGTGGGAACGTCTGGGATGCAAAAGGCGACCATGAAAAAAATGTTGCA
TTTGGCCCCCCATATGCATTGCTTCAAGGAACACTGGAAGTTGATGGTGTGCCCTTCAAG
AAGATACCAAGAGAAGCATGTCCGGCGGTGAAAAGAGGGTCCGTTGCCTGGGTAGGGTCA
GGGCCAGAGTTCCTGATCAGCTTAGCGGACCACGAGGAGTGGAGGGACGCCTACACCGTG
TTCGGGAATGTGCTTCCCATGGACATGGCGATCGCTGAGGAGATGACACTGCTGCCGACA
AGCACAGACGTGTGGAGCAACGTGAAAGTGAAGGTGCTGAAAGATCCTGTCTACTTCAAG
GTCAAGAGAAGCAGCAATGCTAGCGCTGTCTAG

Peptide Sequence

PEP ID

Zm00001d048556_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:9:158637586:158648645:1 gene:Zm00001d048556 transcript:Zm00001d048556_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:peptidyl-prolyl cis-trans isomerases
Sequence

MPALPAFPLTRRPSDARRRGRLVLSLVVFVAVSAAAALAYLSFPSAGRTSPPAVRTEADC
CRGMEGLELWGPAVKWGSDHRLPSAAACCAACKAMCPHPKDGACRCDSWVFCGDERKCKD
RLGECWLKKQKDVMAPAVIAKGEDVMWTSGLIFGKGEGIVGLETNLGTLHIQLLPGCAPR
SVDHFIELLGLRNCAGCRFYRAEGRGNVWDAKGDHEKNVAFGPPYALLQGTLEVDGVPFK
KIPREACPAVKRGSVAWVGSGPEFLISLADHEEWRDAYTVFGNVLPMDMAIAEEMTLLPT
STDVWSNVKVKVLKDPVYFKVKRSSNASAV

Transcript Sequence

Transcript ID

Zm00001d048556_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:158637586:158648645:1 gene:Zm00001d048556 gene_biotype:protein_coding transcript_biotype:protein_coding description:peptidyl-prolyl cis-trans isomerases
Sequence

GTGAAATCGCCAAACACCTGAGATCTGCTTTTTCGGTCTGGTGGAACGTGGAATTGCAGC
AGACCTGGGCGGGTAAAGCGTGAACGCCTGTACGACGCAACACGCCGAGGCGGTGGCTGC
GGCGGCGGCGCGCCGGTATTTCGATTGTGAATTCCCTCCTGTCTCCTGAAGCAAGCGCAG
CAATGCCAGCGCTTCCCGCTTTTCCCCTCACCCGCCGCCCATCCGATGCCAGACGCCGCG
GTCGCCTCGTCCTTTCCCTCGTCGTCTTCGTTGCTGTCTCCGCCGCCGCAGCCCTCGCCT
ACCTATCTTTCCCCTCTGCCGGGCGGACATCGCCCCCGGCGGTCCGGACGGAGGCCGACT
GCTGCAGGGGTATGGAGGGCCTCGAGCTCTGGGGCCCGGCGGTCAAGTGGGGCTCAGACC
ACCGCCTGCCCTCCGCCGCCGCCTGCTGCGCCGCCTGCAAGGCCATGTGCCCTCACCCTA
AGGACGGGGCCTGCCGCTGCGACTCGTGGGTCTTCTGCGGTGACGAGCGCAAATGCAAGG
ACAGGCTCGGGGAGTGCTGGCTGAAGAAACAGAAGGATGTCATGGCCCCTGCTGTTATTG
CAAAGGGGGAGGACGTCATGTGGACTTCTGGTCTAATCTTTGGAAAAGGAGAGGGGATTG
TGGGGCTTGAAACAAATTTAGGGACACTTCATATTCAATTGCTGCCTGGTTGCGCGCCCC
GTTCAGTGGACCACTTCATCGAGCTCCTGGGCTTGCGCAACTGTGCTGGATGCAGATTTT
ATCGTGCAGAAGGACGTGGGAACGTCTGGGATGCAAAAGGCGACCATGAAAAAAATGTTG
CATTTGGCCCCCCATATGCATTGCTTCAAGGAACACTGGAAGTTGATGGTGTGCCCTTCA
AGAAGATACCAAGAGAAGCATGTCCGGCGGTGAAAAGAGGGTCCGTTGCCTGGGTAGGGT
CAGGGCCAGAGTTCCTGATCAGCTTAGCGGACCACGAGGAGTGGAGGGACGCCTACACCG
TGTTCGGGAATGTGCTTCCCATGGACATGGCGATCGCTGAGGAGATGACACTGCTGCCGA
CAAGCACAGACGTGTGGAGCAACGTGAAAGTGAAGGTGCTGAAAGATCCTGTCTACTTCA
AGGTCAAGAGAAGCAGCAATGCTAGCGCTGTCTAGGTGATGGGCATATTTCTTCTTGCTT
GTTTGGATGGAAGGCTGTGGCAACACCGGCAAATGGTTGTTTGACCATGAAAACCTGTGT
TATAACTCACAGGAGACGATGGTCTCGCTTCATTGTGCAAAGAAAGGGGAGAGTTCTAAT
ACAACAGTAATATACTAGCACAGTAGTAATATACTAGTACAATACTCCTAGTACAAAGGC
CGGAGATTCTCTCTTTTTTCCTCGTGTAGAACACGTGACTCAACGAGTTCTTCGTGTCTT
TTAGTTTGCCTCCTGCGTTTTGGCCCGTTAGGCATCTCCAGCATATCCTATATCATATTT
TCTATT