Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048516_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:9:157632246:157634545:-1 gene:Zm00001d048516 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA methyl transferase3 description:DNA (cytosine-5)-methyltransferase DRM2
Sequence

ATGTCACGGAAGGACGAAAAAGTTGATTCCTTAGTTAAAATGGGGTTTCCTGAAGACGAG
GCTGCACTGGCTATTACCAGATGCGGTGATGCATCTATTTCTGTTCTGGTGGATTCAATC
TATGCTTCACAGACCGCAGGAGATGGTTACTGTGGCAATCTGTCTGACTATGAGGATAAT
TCCTATGGAGGGAGAAGCACAGGGAACAAGAAAAAGAGAAAAAGATATGGAGGCCAAGCA
CAGGGAAGTAGAGGCCCATTAGATGGTAGCTGTGATGAACCCATGCCTCTCCCACATCCA
ATGGTTGGATTTAACTTGCCAGACCAGTGGTCAAGACGAGTGGACAGATCGTTGCCTGCA
CAAGCTATTGGTCCGCCGTACTTCTACTACGAGAACGTTGCTCTTGCTCCAAAAGGTGTC
TGGACTACCATATCAAGATTCTTGTATGATATTCAACCAGAGTTTGTGGACTCAAAGTAC
TTCTGTGCTGCTGCCAGGAAAAGGGGTTACATACACAACCTGCCACTTGAGAACAGGTCA
CCTCTCCTCCCCATACCCCCAAAGACGATATCGGAAGCATTTCCTCGGACCAAGAGGTGG
TGGCCTTCATGGGACCCAAGACGACAGTTCAATTGCCTCCAGACTTGCGTGTCTAGTGCA
AAATTGTTAGAGAGGATTCGCGTAGCCCTCACAAACAGTTCAGACCCACCTCCTCCAAGA
GTTCAGAAGTATGTGTTGGAGGAGTGTAGGAAATGGAACCTGGCATGGGTTGGCTTAAAC
AAGGTTGCTCCTCTAGAGCCTGACGAGATGGAGTTTCTACTCGGCTTTCCGAAGGATCAC
ACGAGAGGTATCAGCAGGACAGAGAGGTATCGATCTCTAGGAAATTCATTTCAGGTCGAT
ACTGTTGCTTACCATCTCTCAGTTCTGAAGGATCTGTTCCCACAAGGCATGAATGTGCTG
TCTTTATTCTCTGGTATTGGAGGAGCAGAGGTGGCTCTCCACAGGCTTGGCATACAGATG
AACACGGTTATTTCAGTGGAGAAGTCCGAGGTCAACCGGACGATTCTGAAGAGTTGGTGG
GATCAGACGCAGACGGGTACTCTGATTGAGATCACTGATGTGCAGACACTGTCATCTGAG
AGGATCGAGGCGTATATTAGAAGAATTGGGGGCTTCGATCTTGTGATTGGTGGAAGTCCC
TGTAACAACCTCACTGGGAGCAACCGTCACCACAGAGATGGTTTGGAGGGCGAGCATTCT
GCATTGTTCCATCATTATTTTAGGATCTTACACGCCGTCAAGTCCATCATGGAGCGTTTG
TAG

Peptide Sequence

PEP ID

Zm00001d048516_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:9:157632246:157634545:-1 gene:Zm00001d048516 transcript:Zm00001d048516_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA methyl transferase3 description:DNA (cytosine-5)-methyltransferase DRM2
Sequence

MSRKDEKVDSLVKMGFPEDEAALAITRCGDASISVLVDSIYASQTAGDGYCGNLSDYEDN
SYGGRSTGNKKKRKRYGGQAQGSRGPLDGSCDEPMPLPHPMVGFNLPDQWSRRVDRSLPA
QAIGPPYFYYENVALAPKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYIHNLPLENRS
PLLPIPPKTISEAFPRTKRWWPSWDPRRQFNCLQTCVSSAKLLERIRVALTNSSDPPPPR
VQKYVLEECRKWNLAWVGLNKVAPLEPDEMEFLLGFPKDHTRGISRTERYRSLGNSFQVD
TVAYHLSVLKDLFPQGMNVLSLFSGIGGAEVALHRLGIQMNTVISVEKSEVNRTILKSWW
DQTQTGTLIEITDVQTLSSERIEAYIRRIGGFDLVIGGSPCNNLTGSNRHHRDGLEGEHS
ALFHHYFRILHAVKSIMERL

Transcript Sequence

Transcript ID

Zm00001d048516_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:157632246:157634545:-1 gene:Zm00001d048516 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA methyl transferase3 description:DNA (cytosine-5)-methyltransferase DRM2
Sequence

TTTTGAAGGTAATTGCAATAGTAGTTTATGTAGCTTGTCAACTGATTTCTTACATGAGAT
GTCACGGAAGGACGAAAAAGTTGATTCCTTAGTTAAAATGGGGTTTCCTGAAGACGAGGC
TGCACTGGCTATTACCAGATGCGGTGATGCATCTATTTCTGTTCTGGTGGATTCAATCTA
TGCTTCACAGACCGCAGGAGATGGTTACTGTGGCAATCTGTCTGACTATGAGGATAATTC
CTATGGAGGGAGAAGCACAGGGAACAAGAAAAAGAGAAAAAGATATGGAGGCCAAGCACA
GGGAAGTAGAGGCCCATTAGATGGTAGCTGTGATGAACCCATGCCTCTCCCACATCCAAT
GGTTGGATTTAACTTGCCAGACCAGTGGTCAAGACGAGTGGACAGATCGTTGCCTGCACA
AGCTATTGGTCCGCCGTACTTCTACTACGAGAACGTTGCTCTTGCTCCAAAAGGTGTCTG
GACTACCATATCAAGATTCTTGTATGATATTCAACCAGAGTTTGTGGACTCAAAGTACTT
CTGTGCTGCTGCCAGGAAAAGGGGTTACATACACAACCTGCCACTTGAGAACAGGTCACC
TCTCCTCCCCATACCCCCAAAGACGATATCGGAAGCATTTCCTCGGACCAAGAGGTGGTG
GCCTTCATGGGACCCAAGACGACAGTTCAATTGCCTCCAGACTTGCGTGTCTAGTGCAAA
ATTGTTAGAGAGGATTCGCGTAGCCCTCACAAACAGTTCAGACCCACCTCCTCCAAGAGT
TCAGAAGTATGTGTTGGAGGAGTGTAGGAAATGGAACCTGGCATGGGTTGGCTTAAACAA
GGTTGCTCCTCTAGAGCCTGACGAGATGGAGTTTCTACTCGGCTTTCCGAAGGATCACAC
GAGAGGTATCAGCAGGACAGAGAGGTATCGATCTCTAGGAAATTCATTTCAGGTCGATAC
TGTTGCTTACCATCTCTCAGTTCTGAAGGATCTGTTCCCACAAGGCATGAATGTGCTGTC
TTTATTCTCTGGTATTGGAGGAGCAGAGGTGGCTCTCCACAGGCTTGGCATACAGATGAA
CACGGTTATTTCAGTGGAGAAGTCCGAGGTCAACCGGACGATTCTGAAGAGTTGGTGGGA
TCAGACGCAGACGGGTACTCTGATTGAGATCACTGATGTGCAGACACTGTCATCTGAGAG
GATCGAGGCGTATATTAGAAGAATTGGGGGCTTCGATCTTGTGATTGGTGGAAGTCCCTG
TAACAACCTCACTGGGAGCAACCGTCACCACAGAGATGGTTTGGAGGGCGAGCATTCTGC
ATTGTTCCATCATTATTTTAGGATCTTACACGCCGTCAAGTCCATCATGGAGCGTTTGTA
GTTCTTAGAATCTTTACTGTTGTTTTGGTTCTAGTAGAATACTTTGTGACCGAACTTGTA
AATGGTTTGCAGGTTGACTGGTTTAGTTCTCTTGCCACTCTAATTTAGGCTAGTTTTTTT