Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048511_T037
CDS Infomation	cds chromosome:B73_RefGen_v4:9:157574615:157589123:-1 gene:Zm00001d048511 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-2 complex subunit alpha-2
Sequence	ATGAGAGCTCTTCAGTACTTCCCTACCATTGAAGATCCCAACGCAAGACGGGCTTTGTTT GAGGTTTTACAGCGTATTTTGATGGGTACTGATGTTGTTAAAAATGTTAACAAGAACAAT GCCTCACATGCTGTTCTCTTTGAAGCTCTTGCTCTGGTCATGCATCTGGATGCTGAGAAG GAGATGATGTCACAGTGTGTGGCTCTTCTTGGGAAGTTTATTGCAGTCCGGGAGCCAAAC ATTCGGTACCTCGGTCTGGAAAACATGACTAGGATGCTGTTAGTAACAGATGTGCAGGAT ATCATTAGAAGGCACCAGGCCCAGATCATTACATCTTTGAAGGATCCAGATATCAGCATT AGACGGAGGGCTCTTGATTTATTATATGGCATGTGTGATGTTACAAACGCGAAAGAAATT GTTGAGGAGTTGTTGCAGTACCTTGATACAGCTGAATTTGCAATGCGTGAAGAGTTGTCT CTGAAGGCAGCTATTCTTGCAGAAAAATTTGCTCCACAACTATTGTGGTATGTTGATGTT ATTCTTCAGCTTATAGACAAAGCTGGAGATTTTGTAAGTGATGATATATGGTATCGAGTT GTACAATTTGTCACGAACAACGAAGATCTACAGTCATATGCTGCAGCTAAGGCAAGAGAA TATCTTGACAAGCCTGCTTTACATGAGACAATGGTCAAGGTGAGTGCCTACCTTCTTGGG GAGTATGGCCATCTTTTGGCCCGGAGACCTGGCTGTAGCCCTAAGGAATTGTTTGCTATT ATAAATGATAAACTTCCGACAGTATCGACAAGTACTGTAGCTATTCTTCTCTCAACCTAT GCCAAGATATTGATCCACACTCAACCTCCTGATGTTGGACTGCAGCAACAAATCCTCACA ATATTTAAAAAGTACGAGAGCTATATTGATGTTGAAATACAACAGAGAGCAGTTGAGTAT TTTGAACTAAGCAGGAAAGGCCCTGCTTTGGCAGATGTGTTGGCTGAAATGCCAAAATTC CCTGAGCGTGAGTCTGCACTTCTGAAGAAGGCTGAAGACGCTGAGATTGACACAGCAGAG CAAAGTGCTATAAAGCTACGCAGTCAGCAACAAACTTCCAGTGCTCTTGTTGTAGCTGAT CACTCCCCTGCAAATGGATCTGCACCACCAGCTAATCATCTCACTCTTGTGAAGATGCCA AGCCAAATTGTTTCTGACACTCAGGAGAGTGGGGTAATTCATGAAGAAGTTCCTAATCCT CCTGTTGAAGCTCCCAAAGAAAATGGGACTCCCGTCGAAGTGGAAAGCAGGGACACAAAC ATTACTGGAATCAACAATGAGGTTAAAACTGAACCACCCTCTACATCGCATTCTACCTCT CCCGCGGACCTCCTGGCAGATCTTTTGGGTCCTCTTGCGATAGAGGGCCCTCCTGCCGTA GAGCAAAATCCTACCCAAGGATTGAATAGTAATCAAAGTCCAGTTGGTGACTTGGCACTT GCTACCCTTGATGATCAATCCAACTCAGTTCAGCCAATTGTCAACGTCGAGGAAAAGTTC CATATATTGTGCACAAAAGATAGCGGAGTGCTGTACGAGGATCCTCACATTCAGATTGGT ATGAAAGCAGAGTGGCGTGCCCATCATGGCCGTCTTGTTCTTTTCCTGGGTAACAAAAAT ACTTCAGCCCTTACGTCAGTGCGGGTGCTGATTTTGCCTCCTAGTCATTTGAAAATGGAA CTTTCGTCTGTTCCCGATACTATTCCTCCAAGGGCGCAGGTGCAAGTTCCACTTGAGGTT GCAAATCTCCGTGCAAGTAGAGATGTTGCGGTTTTAGATCTCTCATATACTTTTGGAACT TCACTGGTGGATGGCAAACTTCGACTTCCTGTTGTATTGAATAAATTTTTGCAGCCTATA ACTCTTACCCCTGAAGAATTTTTCCTCCAGTGGAAAGCGCTGACTGTTCACTTGCTGAAG GTTCAAGAAGTGGTTAAAGGTGTGAAACCAATGCCTCTTTCTGAGATGGCTAATCTTTTC ATGAGCCTTCACTTGGCGGTCGCTCCTGGACTTGATAACAACCCGAACAATCTGGTTGCA TGCACGACATTCTTTTCTGAAGCAACACGGGCCATGCTTTGTCTGATAAGACTTGAAACA GATCCACAAGACAGGACCCAACTGCGGCTGACAGTTGCCTCGGGCGATCAACATTTGACA TTCGAGTTGAAAGAGTTCGTCAAGGAACATTTGATTGATATCCCAAGGACTCAGGCTGCC CCACCTATGGCAATGGTCCAGCCACAGTTGCTTACTGCAGCACCTGCCACATACAATGAC CCTGGTGCCATGCTTGCTGGATTGCTATGA

Peptide Sequence

PEP ID	Zm00001d048511_P037
PEP Infomation	pep chromosome:B73_RefGen_v4:9:157574615:157589123:-1 gene:Zm00001d048511 transcript:Zm00001d048511_T037 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-2 complex subunit alpha-2
Sequence	MRALQYFPTIEDPNARRALFEVLQRILMGTDVVKNVNKNNASHAVLFEALALVMHLDAEK EMMSQCVALLGKFIAVREPNIRYLGLENMTRMLLVTDVQDIIRRHQAQIITSLKDPDISI RRRALDLLYGMCDVTNAKEIVEELLQYLDTAEFAMREELSLKAAILAEKFAPQLLWYVDV ILQLIDKAGDFVSDDIWYRVVQFVTNNEDLQSYAAAKAREYLDKPALHETMVKVSAYLLG EYGHLLARRPGCSPKELFAIINDKLPTVSTSTVAILLSTYAKILIHTQPPDVGLQQQILT IFKKYESYIDVEIQQRAVEYFELSRKGPALADVLAEMPKFPERESALLKKAEDAEIDTAE QSAIKLRSQQQTSSALVVADHSPANGSAPPANHLTLVKMPSQIVSDTQESGVIHEEVPNP PVEAPKENGTPVEVESRDTNITGINNEVKTEPPSTSHSTSPADLLADLLGPLAIEGPPAV EQNPTQGLNSNQSPVGDLALATLDDQSNSVQPIVNVEEKFHILCTKDSGVLYEDPHIQIG MKAEWRAHHGRLVLFLGNKNTSALTSVRVLILPPSHLKMELSSVPDTIPPRAQVQVPLEV ANLRASRDVAVLDLSYTFGTSLVDGKLRLPVVLNKFLQPITLTPEEFFLQWKALTVHLLK VQEVVKGVKPMPLSEMANLFMSLHLAVAPGLDNNPNNLVACTTFFSEATRAMLCLIRLET DPQDRTQLRLTVASGDQHLTFELKEFVKEHLIDIPRTQAAPPMAMVQPQLLTAAPATYND PGAMLAGLL

Transcript Sequence

Transcript ID	Zm00001d048511_T037
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:157574615:157589123:-1 gene:Zm00001d048511 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-2 complex subunit alpha-2
Sequence	TCCTGATGTTGTGAATATTGATGGCTGGGCTGATCGAATGGCACAACTTCTAGATGAGCG TGATCTAGGTGTGCTGACATCTGTCATGAGTCTTTTTGTTTCACTAGTATCCAACAATTC TGAAGCATATTGGAATTGTCTTCCAAAATGTGTAAGAATATTGGAGAGATTAGCAAGAAA TCAAGATATTCCACAAGAGTACACTTATTATGGAATTCCATCTCCTTGGCTTCAGGTACT TCCCTTTCATGCCATTATCCATTCAACCAGCTTCATTTATTAGTAAAGTTAGGCCTTTAC TTAGTAGTCATTAGGCTGTTACCTTCTATTAAGCTTAACCAACAACTCCAGTTAGTCTGC GTTTGGAGGTATGTACATAGCAACACAAGCAATTTGTCATGTGTATACACATTAGTTATG TGTATAGCATAGTTTAACGGTTGCTATGTAAACCTTCCATAAGAGTTACTCTAAAGCTAT TTAGGCAAGTTGTGATGCAGGGCTAGTTTTTTTTAAGTTTAGCACAAGCCTTAAACCCAT ATTACGCATTCCGCACTGTGAATAATAAGTAAGCAACCATATCAATTAATTACTGAAACT AAACAATAAACATGTGGAGTTGCTATTGTTAGAATGTTTCTTTTTATTGTTAGGGAGATA GAATGTTTTTCCTGCAGGGTGGACTTATGTAGTGCATTGGCCATGGCAGAGGTGCAGATT GTTTGATATTACAGAGTCTTTCTTCATGGTTTTTGAATTATTTTACATCTTTGATTTTAT GTTGGCGTGTGAAGGAAACCATGTATATGCATTGGATGGAACCATGTATTCAGCTAAGAA TAAAATTTAATTTTCACAGGTTAAGACAATGAGAGCTCTTCAGTACTTCCCTACCATTGA AGATCCCAACGCAAGACGGGCTTTGTTTGAGGTTTTACAGCGTATTTTGATGGGTACTGA TGTTGTTAAAAATGTTAACAAGAACAATGCCTCACATGCTGTTCTCTTTGAAGCTCTTGC TCTGGTCATGCATCTGGATGCTGAGAAGGAGATGATGTCACAGTGTGTGGCTCTTCTTGG GAAGTTTATTGCAGTCCGGGAGCCAAACATTCGGTACCTCGGTCTGGAAAACATGACTAG GATGCTGTTAGTAACAGATGTGCAGGATATCATTAGAAGGCACCAGGCCCAGATCATTAC ATCTTTGAAGGATCCAGATATCAGCATTAGACGGAGGGCTCTTGATTTATTATATGGCAT GTGTGATGTTACAAACGCGAAAGAAATTGTTGAGGAGTTGTTGCAGTACCTTGATACAGC TGAATTTGCAATGCGTGAAGAGTTGTCTCTGAAGGCAGCTATTCTTGCAGAAAAATTTGC TCCACAACTATTGTGGTATGTTGATGTTATTCTTCAGCTTATAGACAAAGCTGGAGATTT TGTAAGTGATGATATATGGTATCGAGTTGTACAATTTGTCACGAACAACGAAGATCTACA GTCATATGCTGCAGCTAAGGCAAGAGAATATCTTGACAAGCCTGCTTTACATGAGACAAT GGTCAAGGTGAGTGCCTACCTTCTTGGGGAGTATGGCCATCTTTTGGCCCGGAGACCTGG CTGTAGCCCTAAGGAATTGTTTGCTATTATAAATGATAAACTTCCGACAGTATCGACAAG TACTGTAGCTATTCTTCTCTCAACCTATGCCAAGATATTGATCCACACTCAACCTCCTGA TGTTGGACTGCAGCAACAAATCCTCACAATATTTAAAAAGTACGAGAGCTATATTGATGT TGAAATACAACAGAGAGCAGTTGAGTATTTTGAACTAAGCAGGAAAGGCCCTGCTTTGGC AGATGTGTTGGCTGAAATGCCAAAATTCCCTGAGCGTGAGTCTGCACTTCTGAAGAAGGC TGAAGACGCTGAGATTGACACAGCAGAGCAAAGTGCTATAAAGCTACGCAGTCAGCAACA AACTTCCAGTGCTCTTGTTGTAGCTGATCACTCCCCTGCAAATGGATCTGCACCACCAGC TAATCATCTCACTCTTGTGAAGATGCCAAGCCAAATTGTTTCTGACACTCAGGAGAGTGG GGTAATTCATGAAGAAGTTCCTAATCCTCCTGTTGAAGCTCCCAAAGAAAATGGGACTCC CGTCGAAGTGGAAAGCAGGGACACAAACATTACTGGAATCAACAATGAGGTTAAAACTGA ACCACCCTCTACATCGCATTCTACCTCTCCCGCGGACCTCCTGGCAGATCTTTTGGGTCC TCTTGCGATAGAGGGCCCTCCTGCCGTAGAGCAAAATCCTACCCAAGGATTGAATAGTAA TCAAAGTCCAGTTGGTGACTTGGCACTTGCTACCCTTGATGATCAATCCAACTCAGTTCA GCCAATTGTCAACGTCGAGGAAAAGTTCCATATATTGTGCACAAAAGATAGCGGAGTGCT GTACGAGGATCCTCACATTCAGATTGGTATGAAAGCAGAGTGGCGTGCCCATCATGGCCG TCTTGTTCTTTTCCTGGGTAACAAAAATACTTCAGCCCTTACGTCAGTGCGGGTGCTGAT TTTGCCTCCTAGTCATTTGAAAATGGAACTTTCGTCTGTTCCCGATACTATTCCTCCAAG GGCGCAGGTGCAAGTTCCACTTGAGGTTGCAAATCTCCGTGCAAGTAGAGATGTTGCGGT TTTAGATCTCTCATATACTTTTGGAACTTCACTGGTGGATGGCAAACTTCGACTTCCTGT TGTATTGAATAAATTTTTGCAGCCTATAACTCTTACCCCTGAAGAATTTTTCCTCCAGTG GAAAGCGCTGACTGTTCACTTGCTGAAGGTTCAAGAAGTGGTTAAAGGTGTGAAACCAAT GCCTCTTTCTGAGATGGCTAATCTTTTCATGAGCCTTCACTTGGCGGTCGCTCCTGGACT TGATAACAACCCGAACAATCTGGTTGCATGCACGACATTCTTTTCTGAAGCAACACGGGC CATGCTTTGTCTGATAAGACTTGAAACAGATCCACAAGACAGGACCCAACTGCGGCTGAC AGTTGCCTCGGGCGATCAACATTTGACATTCGAGTTGAAAGAGTTCGTCAAGGAACATTT GATTGATATCCCAAGGACTCAGGCTGCCCCACCTATGGCAATGGTCCAGCCACAGTTGCT TACTGCAGCACCTGCCACATACAATGACCCTGGTGCCATGCTTGCTGGATTGCTATGAGA AGTAAAAAAACAAAAGCCATAGTGTTTTGATGTACATGACAGATGTTGATCTAACATCTC CAAAAGCATCTTGCTGCCAAGACGAACACGTGGAGCAACGAAAGGGCTGGCGGAGTAGTC TTCAGCTGGATTCTAAACCGAGAAAAAGCTAGATTCTTTTGGGCGGTTTGAAGGCCTCCT TCCCCTCCATGGAGCAGTCCCCATATTGTGTAAGCGTAATTTGTTGTTTCTCATTTATCA TCCCCTTTTGG