Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048494_T013
CDS Infomation	cds chromosome:B73_RefGen_v4:9:157169124:157172896:-1 gene:Zm00001d048494 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hydroxymethylglutaryl-CoA synthase%3B Putative hydroxymethylglutaryl-CoA synthase family protein isoform 1%3B Putative hydroxymethylglutaryl-CoA synthase family protein isoform 2%3B Putative hydroxymethylglutaryl-CoA synthase family protein isoform 3
Sequence	ATGGCATTGGACTCCTGCTACAATGTATTTTGCAAAAAGTATGAAAAACATGAGGGGAAG CAGTTTTCAATTTCTGATGCAGATTATGTTGTGTTCCATTCTCCATACAACAAGCTTGTA CAGAAAAGCTTCGCTCGTTTGTACTACAATGATTTCTTGAGAAACTGCAGCACGGTTGAT GGAGAGTCAAGGGAAAAATTGGCACCCTATGCAGGCTTGTCATCTGAAGAAAGCTACCAG AGTCGCGACCTTGAAAAGGCATCTCAGCAAGTCGCCAAGAATCTGTACGAGACCAAGGTT CAGCCAACAACATTGATCCCAAAACAAGTTGGGAATATGTATACAGCATCACTCTACGCA GCTCTTGCATCGGTTGTCCATAGTAGGCATGAAACTCTGGCAGGCCAGAGGATTGTTATG TTTTCGTATGGCAGTGGGTTGACATCAACAATGTTCTCTTTCATGATTAATGAAGGCCAT CACCCTTTCAGTCTGCTAAACATCGCAAACATACTGGATATTTCCAAGAAGCTGAAGGCA AGGCACGTGGTTCCCCCAGAGAAATTTGTGGAGGCACTGAAACTGATGGAGCACCGCTAT GGGGCAAGAGATTTCGTGACGAATCAAGATACAAGTCTGCTATCCGCAGGCACATACTAT CTCACGCACGTTGACTCCAAGTACAGAAGGTTCTACGACGTGAAAGGTGACGGTGTCGCC ACTGCAATGTCCAACGGCCACTGA

Peptide Sequence

PEP ID	Zm00001d048494_P013
PEP Infomation	pep chromosome:B73_RefGen_v4:9:157169124:157172896:-1 gene:Zm00001d048494 transcript:Zm00001d048494_T013 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hydroxymethylglutaryl-CoA synthase%3B Putative hydroxymethylglutaryl-CoA synthase family protein isoform 1%3B Putative hydroxymethylglutaryl-CoA synthase family protein isoform 2%3B Putative hydroxymethylglutaryl-CoA synthase family protein isoform 3
Sequence	MALDSCYNVFCKKYEKHEGKQFSISDADYVVFHSPYNKLVQKSFARLYYNDFLRNCSTVD GESREKLAPYAGLSSEESYQSRDLEKASQQVAKNLYETKVQPTTLIPKQVGNMYTASLYA ALASVVHSRHETLAGQRIVMFSYGSGLTSTMFSFMINEGHHPFSLLNIANILDISKKLKA RHVVPPEKFVEALKLMEHRYGARDFVTNQDTSLLSAGTYYLTHVDSKYRRFYDVKGDGVA TAMSNGH

Transcript Sequence

Transcript ID	Zm00001d048494_T013
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:157169124:157172896:-1 gene:Zm00001d048494 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hydroxymethylglutaryl-CoA synthase%3B Putative hydroxymethylglutaryl-CoA synthase family protein isoform 1%3B Putative hydroxymethylglutaryl-CoA synthase family protein isoform 2%3B Putative hydroxymethylglutaryl-CoA synthase family protein isoform 3
Sequence	ACGTATTGCTTTGTTTGTTTCACCATGTTTACAGAAATCAGTAAATGCTTTCAACTCAGT CGTGTGCATAGTAGTTTCAGTCCTCAAGTGCATGCTGCTATTTCTACATTTTATTTGTTT GAGTAGAATAATAGGCCAACATGTGACGCCTGTTAGAAAACATCTGTAAAATTGAATAGG AGGGGAGGAAAAAAGATTGTAAATTAAACAAGGGCTTCATCCCATTCAAAACATCTGGTA TTTTTAGAATACATTCAGTTTTCTATTGTGAGGTGATTGAATCGCCCATAACGCTCCAGT TTGTCGTCGTTTTATTAGTATCTGTGTCATTCTGTTTGGTAGTTGTTGTGCTGCACTAAA AAATTACATGATATTTGTTACAGGAAGAGTTGGAAACACATGATGGCGTGAGCAAAGGGA AGTATACCATTGGGCTTGGGCAGGAAAGTATGGCATTTTGCACTGAAGTTGAGGATGTTA TTTCGATGAGCTTGACAGTGGTGAAGTCCCTCCTGAAAAATTATAACATTGACCCAATGT GCATTGGACGTTTGGAAGTTGGCAGTGAAACAGTAATAGACAAGAGCAAGTCTATAAAGA CATGGCTGATGCAGATATTTGAGGAATCTGGCAATACTGATATTGAAGGAGTTGACTCCT CGAATGCATGTTATGGTGGAACAGCTGCATTGTTTAATTGTGTTAACTGGGTTGAAAGCA AGTCATGGGATGGTCGCTATGGACTTGTTGTTTGCACAGACAGTGCGGTTTACGCTGAAG GTCCGGCTCGCCCTACTGGTGGTGCGGCTGCTATTGCAATGCTGATTGGACCAAATGCTC CTATTTGTTTTGAAAGTAAATATAGAGGATCTCATATGGCCCATGTATACGACTTTTACA AGCCCGATCTTGCGAGTGAATATCCGGTCTGTCTCTAGTCAACACGTGTCTTGCACGCCA AAACAGACGCACTAAACTGAAATTTAATGGAAAGGAACTTATGTCATACAATGTGTGTAG GTGGTTGATGGGAAGCTATCACAAACATGCTACCTCATGGCATTGGACTCCTGCTACAAT GTATTTTGCAAAAAGTATGAAAAACATGAGGGGAAGCAGTTTTCAATTTCTGATGCAGAT TATGTTGTGTTCCATTCTCCATACAACAAGCTTGTACAGAAAAGCTTCGCTCGTTTGTAC TACAATGATTTCTTGAGAAACTGCAGCACGGTTGATGGAGAGTCAAGGGAAAAATTGGCA CCCTATGCAGGCTTGTCATCTGAAGAAAGCTACCAGAGTCGCGACCTTGAAAAGGCATCT CAGCAAGTCGCCAAGAATCTGTACGAGACCAAGGTTCAGCCAACAACATTGATCCCAAAA CAAGTTGGGAATATGTATACAGCATCACTCTACGCAGCTCTTGCATCGGTTGTCCATAGT AGGCATGAAACTCTGGCAGGCCAGAGGATTGTTATGTTTTCGTATGGCAGTGGGTTGACA TCAACAATGTTCTCTTTCATGATTAATGAAGGCCATCACCCTTTCAGTCTGCTAAACATC GCAAACATACTGGATATTTCCAAGAAGCTGAAGGCAAGGCACGTGGTTCCCCCAGAGAAA TTTGTGGAGGCACTGAAACTGATGGAGCACCGCTATGGGGCAAGAGATTTCGTGACGAAT CAAGATACAAGTCTGCTATCCGCAGGCACATACTATCTCACGCACGTTGACTCCAAGTAC AGAAGGTTCTACGACGTGAAAGGTGACGGTGTCGCCACTGCAATGTCCAACGGCCACTGA TCTTTCTTCTGCCCGAAGCTGCAACAAGTCAAATAACAGAGGCAAGTGTCCTAAGCATCC TTAGATTATTATATCTATTAAGAGGGGAAGCTCGAGTTATAGATTAATCTATGCCCAGCT GTAAGGTTGTAAAGTTAGTTAGAGCTGCGCATGCTTGTTTAGTAAAAGCTCTGCTGCTCT TCAGTTATTTAGCGAATCAAGCACACTGCTGGGCTAATAAGAATTGTAAACAAT